Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p15050 Brassica napus HOM05D004123 ORTHO05D004768 5.2e-142 507.7 251 100.0
BolC2t08567H Brassica oleracea HOM05D004123 ORTHO05D004768 3.2e-123 445.3 248 91.1
C02p24750 Brassica napus HOM05D004123 ORTHO05D004768 3.5e-122 441.8 246 91.5
Sp5g23550 Schrenkiella parvula HOM05D004123 ORTHO05D004768 1.1e-115 420.2 252 84.5
C06p41480 Brassica napus HOM05D004123 ORTHO05D004768 1.4e-110 403.3 256 80.5
BolC6t39275H Brassica oleracea HOM05D004123 ORTHO05D004768 1.4e-110 403.3 256 80.5
BcaC08g46276 Brassica carinata HOM05D004123 ORTHO05D004768 1.8e-110 402.9 250 82.0
A07p34880 Brassica napus HOM05D004123 ORTHO05D004768 5.8e-109 397.9 256 80.1
BcaB03g15826 Brassica carinata HOM05D004123 ORTHO05D004768 1.6e-106 389.8 251 81.3
Thhalv10019033m.g Eutrema salsugineum HOM05D004123 ORTHO05D004768 7.8e-106 387.5 254 81.1
AL2G27340 Arabidopsis lyrata HOM05D004123 ORTHO05D004768 1.1e-102 377.1 254 79.1
Carub.0002s1499 Capsella rubella HOM05D004123 ORTHO05D004768 3.4e-101 372.1 254 77.2
AT1G68480 Arabidopsis thaliana HOM05D004123 ORTHO05D004768 1.9e-99 366.3 255 77.3
CARHR061260 Cardamine hirsuta HOM05D004123 ORTHO05D004768 1.9e-96 356.3 253 75.9
BraA02t06569Z Brassica rapa HOM05D004123 ORTHO05D004768 7.6e-93 344.4 169 100.0
Aa31sc366G10 Aethionema arabicum HOM05D004123 ORTHO05D004768 8.4e-68 261.2 269 58.0
BcaB05g24386 Brassica carinata HOM05D004123 ORTHO05D004768 2.6e-61 239.6 236 57.6
THA.LOC104821930 Tarenaya hassleriana HOM05D004123 ORTHO05D004768 1.8e-49 200.3 266 48.1
Thecc.02G229500 Theobroma cacao HOM05D004123 ORTHO05D004768 8.2e-47 191.4 277 50.2
Duzib251G0145 Durio zibethinus HOM05D004123 ORTHO05D004768 4.1e-46 189.1 283 47.7
Cpa.g.sc350.1 Carica papaya HOM05D004123 ORTHO05D004768 4.5e-45 185.7 227 53.7
Manes.14G103000 Manihot esculenta HOM05D004123 ORTHO05D004768 8.5e-44 181.4 278 47.1
Manes.06G067400 Manihot esculenta HOM05D004123 ORTHO05D004768 3.2e-43 179.5 220 52.7
Rhsim09G0107600 Rhododendron simsii HOM05D004123 ORTHO05D004768 4.2e-43 179.1 271 47.2
Gohir.A04G098200 Gossypium hirsutum HOM05D004123 ORTHO05D004768 2.1e-42 176.8 219 53.0
Gohir.D04G137875 Gossypium hirsutum HOM05D004123 ORTHO05D004768 2.1e-42 176.8 219 53.0
Gorai.012G122600 Gossypium raimondii HOM05D004123 ORTHO05D004768 2.1e-42 176.8 219 53.0
Duzib248G0829 Durio zibethinus HOM05D004123 ORTHO05D004768 8.0e-42 174.9 277 45.8
Gorai.005G191500 Gossypium raimondii HOM05D004123 ORTHO05D004768 8.0e-42 174.9 261 46.7
Potri.008G121200 Populus trichocarpa HOM05D004123 ORTHO05D004768 8.0e-42 174.9 280 45.4
Gohir.A03G147300 Gossypium hirsutum HOM05D004123 ORTHO05D004768 4.0e-41 172.6 260 45.8
Sabra08G0091900 Salix brachista HOM05D004123 ORTHO05D004768 6.7e-41 171.8 301 42.9
CsaV3_5G023110 Cucumis sativus L. HOM05D004123 ORTHO05D004768 8.8e-41 171.4 282 43.3
Gohir.D02G170500 Gossypium hirsutum HOM05D004123 ORTHO05D004768 1.1e-40 171.0 260 45.8
Duzib268G1624 Durio zibethinus HOM05D004123 ORTHO05D004768 2.0e-40 170.2 226 51.8
CiPaw.15G085900 Carya illinoinensis HOM05D004123 ORTHO05D004768 1.7e-39 167.2 235 49.4
TWI31G0276 Tripterygium wilfordii HOM05D004123 ORTHO05D004768 1.1e-38 164.5 221 49.3
Haze_17490 Corylus avellana HOM05D004123 ORTHO05D004768 5.3e-38 162.2 246 47.2
MELO3C003021.2 Cucumis melo HOM05D004123 ORTHO05D004768 7.0e-38 161.8 234 45.7
Sed0009095 Sechium edule HOM05D004123 ORTHO05D004768 7.0e-38 161.8 277 42.6
Ciclev10018307m.g Citrus clementina HOM05D004123 ORTHO05D004768 1.2e-37 161.0 234 49.1
QL01p041642 Quercus lobata HOM05D004123 ORTHO05D004768 1.2e-37 161.0 231 47.6
Lj2g0014688 Lotus japonicus HOM05D004123 ORTHO05D004768 1.6e-37 160.6 222 49.1
Nn3g17856 Nelumbo nucifera HOM05D004123 ORTHO05D004768 7.7e-37 158.3 242 43.8
SHI16201 Sapria himalayana HOM05D004123 ORTHO05D004768 1.0e-36 157.9 224 46.9
Prupe.1G311900 Prunus persica HOM05D004123 ORTHO05D004768 2.2e-36 156.8 239 46.9
THA.LOC104805006 Tarenaya hassleriana HOM05D004123 ORTHO05D004768 2.2e-36 156.8 260 42.7
CiPaw.16G065300 Carya illinoinensis HOM05D004123 ORTHO05D004768 2.9e-36 156.4 245 46.1
TAR622G0492 Trochodendron aralioides HOM05D004123 ORTHO05D004768 6.5e-36 155.2 293 41.6
Lsat_1_v5_gn_8_40481 Lactuca sativa HOM05D004123 ORTHO05D004768 8.5e-36 154.8 217 47.5
Phvul.007G027700 Phaseolus vulgaris HOM05D004123 ORTHO05D004768 1.1e-35 154.5 231 45.9
GSVIVG01011890001 Vitis vinifera HOM05D004123 ORTHO05D004768 2.5e-35 153.3 219 49.3
vmacro10561 Vaccinium macrocarpon HOM05D004123 ORTHO05D004768 3.2e-35 152.9 234 46.6
HanXRQChr08g0213911 Helianthus annuus HOM05D004123 ORTHO05D004768 9.4e-35 151.4 210 47.6
Glyma.10G273800 Glycine max HOM05D004123 ORTHO05D004768 1.0e-33 147.9 235 43.8
Cc11_g10070 Coffea canephora HOM05D004123 ORTHO05D004768 1.4e-33 147.5 202 49.5
TPR.G18823 Trifolium pratense HOM05D004123 ORTHO05D004768 1.8e-33 147.1 244 42.2
Eucgr.G02316 Eucalyptus grandis HOM05D004123 ORTHO05D004768 2.3e-33 146.7 272 40.8
Oeu034240.1 Olea europaea HOM05D004123 ORTHO05D004768 2.3e-33 146.7 253 43.5
TWI75G1885 Tripterygium wilfordii HOM05D004123 ORTHO05D004768 2.3e-33 146.7 246 45.1
MSTRG.844 Avicennia marina HOM05D004123 ORTHO05D004768 4.0e-33 146.0 225 48.9
Psat6g227440 Pisum sativum HOM05D004123 ORTHO05D004768 6.8e-33 145.2 229 44.1
Medtr1g110710 Medicago truncatula HOM05D004123 ORTHO05D004768 8.8e-33 144.8 249 41.4
Oeu043592.1 Olea europaea HOM05D004123 ORTHO05D004768 8.8e-33 144.8 244 43.4
Lj5g0020149 Lotus japonicus HOM05D004123 ORTHO05D004768 1.5e-32 144.1 313 37.7
TAR374G0469 Trochodendron aralioides HOM05D004123 ORTHO05D004768 1.5e-32 144.1 214 44.9
FvH4_4g27300 Fragaria vesca HOM05D004123 ORTHO05D004768 2.0e-32 143.7 251 40.6
Lj6C757T7 Lonicera japonica HOM05D004123 ORTHO05D004768 5.7e-32 142.1 252 41.3
Lj5g0023256 Lotus japonicus HOM05D004123 ORTHO05D004768 7.5e-32 141.7 230 44.8
TAR629G2125 Trochodendron aralioides HOM05D004946 ORTHO05D006101 1.7e-31 140.6 238 41.2
PGR119G1213 Punica granatum HOM05D004123 ORTHO05D004768 2.8e-31 139.8 279 39.4
ClCG03G009600 Citrullus lanatus HOM05D004123 ORTHO05D004768 1.1e-30 137.9 280 40.4
MD16G1042200 Malus domestica HOM05D004123 ORTHO05D004768 1.4e-30 137.5 213 43.7
Nn4g23857 Nelumbo nucifera HOM05D004123 ORTHO05D004768 4.1e-30 136.0 294 37.4
unitig_22.g6557 Utricularia gibba HOM05D004123 ORTHO05D004768 2.0e-29 133.7 248 41.9
unitig_8.g3254 Utricularia gibba HOM05D004123 ORTHO05D004768 2.0e-29 133.7 231 41.6
MSTRG.13535 Avicennia marina HOM05D004123 ORTHO05D004768 4.5e-29 132.5 218 43.6
FAN12G0145 Fragaria x ananassa HOM05D004123 ORTHO05D004768 7.7e-29 131.7 279 36.9
FAN12G0921 Fragaria x ananassa HOM05D004123 ORTHO05D004768 7.7e-29 131.7 279 36.9
Glyma.20G116200 Glycine max HOM05D004123 ORTHO05D004768 1.0e-28 131.3 261 41.4
Solyc05g009380.4 Solanum lycopersicum HOM05D004123 ORTHO05D004768 1.3e-28 131.0 243 42.4
THA.LOC104805254 Tarenaya hassleriana HOM05D004123 ORTHO05D004768 1.7e-28 130.6 209 43.1
Actinidia14896 Actinidia chinensis HOM05D004123 ORTHO05D004768 2.2e-28 130.2 230 42.6
HanXRQChr09g0252701 Helianthus annuus HOM05D004123 ORTHO05D004768 2.2e-28 130.2 187 46.5
unitig_747.g21201 Utricularia gibba HOM05D004123 ORTHO05D004768 2.2e-28 130.2 219 43.4
Thhalv10009343m.g Eutrema salsugineum HOM05D004123 ORTHO05D004768 3.8e-28 129.4 216 44.4
Lsat_1_v5_gn_3_59041 Lactuca sativa HOM05D004123 ORTHO05D004768 5.0e-28 129.0 212 44.3
PSO063G6205 Papaver somniferum HOM05D004123 ORTHO05D004768 6.5e-28 128.6 271 37.6
PSO782G4509 Papaver somniferum HOM05D004123 ORTHO05D004768 6.5e-28 128.6 270 37.8
Aqoxy3G00286 Aquilegia oxysepala HOM05D004123 ORTHO05D004768 8.5e-28 128.3 246 38.2
SalBow8G0349 Salvia bowleyana HOM05D004123 ORTHO05D004768 8.5e-28 128.3 221 44.3
MD13G1040900 Malus domestica HOM05D004123 ORTHO05D004768 1.5e-27 127.5 217 41.9
BcaC03g14956 Brassica carinata HOM05D004123 ORTHO05D004768 2.5e-27 126.7 65 95.4
FAN07G2244 Fragaria x ananassa HOM05D004123 ORTHO05D004768 2.5e-27 126.7 286 36.7
Sed0004295 Sechium edule HOM05D004123 ORTHO05D004768 3.2e-27 126.3 196 45.4
CAN.G610.78 Capsicum annuum HOM05D004123 ORTHO05D004768 4.2e-27 125.9 203 44.3
Lalb_Chr21g0308891 Lupinus albus HOM05D004123 ORTHO05D004768 6.1e-26 122.1 199 42.7
FAN22G2099 Fragaria x ananassa HOM05D004123 ORTHO05D004768 8.0e-26 121.7 183 47.0
Lalb_Chr10g0100051 Lupinus albus HOM05D004123 ORTHO05D004768 8.0e-26 121.7 209 42.1
AT1G13400 Arabidopsis thaliana HOM05D004123 ORTHO05D004768 1.8e-25 120.6 211 41.7
CANSAT01G1980 Cannabis sativa HOM05D004123 ORTHO05D004768 4.0e-25 119.4 249 39.4
Ah.03g137600 Amaranthus hybridus HOM05D004123 ORTHO05D004768 5.2e-25 119.0 216 39.8
CDE12G0443 Ceratophyllum demersum HOM05D004123 ORTHO05D004768 5.2e-25 119.0 215 40.5
Sc04g0006360 Simmondsia chinensis HOM05D004123 ORTHO05D004768 8.8e-25 118.2 94 69.1
Phvul.003G031000 Phaseolus vulgaris HOM05D004123 ORTHO05D004768 2.0e-24 117.1 217 41.5
DCAR_026735 Daucus carota HOM05D004123 ORTHO05D004768 3.4e-24 116.3 238 40.8
C08p16160 Brassica napus HOM05D004123 ORTHO05D004768 4.4e-24 115.9 237 39.7
ATR1125G037 Amborella trichopoda HOM05D004123 ORTHO05D004768 5.7e-24 115.5 200 41.0
Os01g0129200 Oryza sativa ssp. japonica HOM05D004123 ORTHO05D004768 5.7e-24 115.5 102 62.7
VMungo1215G3079 Vigna mungo HOM05D004123 ORTHO05D004768 5.7e-24 115.5 242 38.4
BolC8t49237H Brassica oleracea HOM05D004123 ORTHO05D004768 9.8e-24 114.8 240 39.2
Carub.0001s1311 Capsella rubella HOM05D004123 ORTHO05D004768 9.8e-24 114.8 148 51.4
AL1G25160 Arabidopsis lyrata HOM05D004123 ORTHO05D004768 2.2e-23 113.6 204 41.2
Sp1g11890 Schrenkiella parvula HOM05D004123 ORTHO05D004768 2.2e-23 113.6 237 38.4
Lsat_1_v5_gn_8_41281 Lactuca sativa HOM05D004123 ORTHO05D004768 2.8e-23 113.2 178 45.5
Sabra10G0094200 Salix brachista HOM05D004123 ORTHO05D004768 4.9e-23 112.5 84 70.2
BcaB03g13142 Brassica carinata HOM05D004123 ORTHO05D004768 8.3e-23 111.7 238 38.7
Aa31LG1G1560 Aethionema arabicum HOM05D004123 ORTHO05D004768 9.2e-22 108.2 225 36.9
A08p32310 Brassica napus HOM05D004123 ORTHO05D004768 1.2e-21 107.8 216 41.7
CSS0039482 Camellia sinensis var. sinensis HOM05D004123 ORTHO05D004768 1.6e-21 107.5 77 71.4
Migut.E00347 Erythranthe guttata HOM05D004123 ORTHO05D004768 1.6e-21 107.5 107 57.9
BraA08t35155Z Brassica rapa HOM05D004123 ORTHO05D004768 3.5e-21 106.3 211 42.2
Psat6g226920 Pisum sativum HOM05D004123 ORTHO05D004768 1.0e-20 104.8 226 37.2
BcaC05g25048 Brassica carinata HOM05D004123 ORTHO05D004768 2.9e-20 103.2 208 41.3
CARHR013770 Cardamine hirsuta HOM05D004123 ORTHO05D004768 3.8e-20 102.8 238 37.0
Zm00001eb335100 Zea mays HOM05D004123 ORTHO05D004768 1.1e-19 101.3 99 56.6
HPP92_004806 Vanilla planifolia HOM05D004123 ORTHO05D004768 1.5e-19 100.9 98 61.2
HPP92_004807 Vanilla planifolia HOM05D004123 ORTHO05D004768 1.5e-19 100.9 98 61.2
TPR.G971 Trifolium pratense HOM05D004123 ORTHO05D004768 3.0e-17 93.2 52 86.5
COL.COLO4_03992 Corchorus olitorius HOM05D004123 ORTHO05D004768 6.8e-17 92.0 267 33.0
Potri.010G124200 Populus trichocarpa HOM05D004123 ORTHO05D004768 1.3e-15 87.8 208 37.5
VMungo0720G2589 Vigna mungo HOM05D004123 ORTHO05D004768 6.4e-15 85.5 278 34.2
Cfa018590 Carpinus fangiana HOM05D004123 ORTHO05D004768 1.6e-13 80.9 193 38.3
Nitab4.5_0003373g0030 Nicotiana tabacum HOM05D004123 ORTHO05D004768 8.0e-10 68.6 230 34.8
SMO266G0088 Selaginella moellendorffii HOM05D004123 ORTHO05D004768 1.8e-09 67.4 54 61.1
SMO288G0011 Selaginella moellendorffii HOM05D004123 ORTHO05D004768 1.8e-09 67.4 54 61.1
arahy.Tifrunner.gnm1.ann1.U1U6XH Arachis hypogaea HOM05D004123 ORTHO05D004768 5.2e-09 65.9 257 31.1
Pp3c20_10790 Physcomitrium patens HOM05D004123 ORTHO05D004768 5.2e-09 65.9 76 47.4
AagrBONN_evm.TU.Sc2ySwM_228.1523 Anthoceros agrestis HOM05D004123 ORTHO05D004768 1.2e-08 64.7 141 34.8
Dinv21080 Davidia involucrata HOM05D004123 ORTHO05D004768 3.4e-08 63.2 223 33.2
RcHm_v2.0_Chr4g0435091 Rosa chinensis HOM05D004123 ORTHO05D004768 1.7e-07 60.8 180 29.4
SalBow8G0756 Salvia bowleyana HOM05D004123 ORTHO05D004768 1.7e-07 60.8 218 33.0
SEGI_27536 Sequoiadendron giganteum HOM05D004123 ORTHO05D000239 2.9e-07 60.1 76 40.8
Sopen05g005180 Solanum pennellii HOM05D004123 ORTHO05D004768 3.7e-07 59.7 175 34.9
Nitab4.5_0000791g0080 Nicotiana tabacum HOM05D004123 ORTHO05D004768 4.9e-07 59.3 172 36.6
arahy.Tifrunner.gnm1.ann1.A2D7P4 Arachis hypogaea HOM05D004123 ORTHO05D004768 8.3e-07 58.5 210 31.4
Pp3c3_21050 Physcomitrium patens HOM05D004123 ORTHO05D004768 8.3e-07 58.5 103 37.9
Dinv31634 Davidia involucrata HOM05D004123 ORTHO05D004768 3.2e-06 56.6 156 34.0
Pp3c23_2190 Physcomitrium patens HOM05D004123 ORTHO05D004768 5.4e-06 55.8 138 31.9
Pp3c23_800 Physcomitrium patens HOM05D059517 ORTHO05D004768 7.0e-06 55.5 146 33.6


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