Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p14980 Brassica napus HOM05D003134 ORTHO05D003500 1.4e-75 286.2 148 100.0
BraA02t06565Z Brassica rapa HOM05D003134 ORTHO05D003500 1.4e-75 286.2 148 100.0
BolC2t08556H Brassica oleracea HOM05D003134 ORTHO05D003500 3.3e-72 275.0 148 96.6
C02p24530 Brassica napus HOM05D003134 ORTHO05D003500 2.0e-69 265.8 148 95.3
BcaB05g24377 Brassica carinata HOM05D003134 ORTHO05D003500 5.9e-69 264.2 148 92.6
Sp5g23500 Schrenkiella parvula HOM05D003134 ORTHO05D003500 2.9e-60 235.3 149 85.2
A07p32020 Brassica napus HOM05D003134 ORTHO05D003500 5.2e-57 224.6 148 83.1
BraA07t30832Z Brassica rapa HOM05D003134 ORTHO05D003500 5.2e-57 224.6 148 83.1
BcaB03g15416 Brassica carinata HOM05D003134 ORTHO05D003500 8.8e-57 223.8 148 82.4
Thhalv10019521m.g Eutrema salsugineum HOM05D003134 ORTHO05D003500 1.3e-55 219.9 150 82.7
BcaC08g45971 Brassica carinata HOM05D003134 ORTHO05D003500 1.4e-54 216.5 150 80.0
C06p37610 Brassica napus HOM05D003134 ORTHO05D003500 1.4e-54 216.5 150 80.0
BolC6t38864H Brassica oleracea HOM05D003134 ORTHO05D003500 1.4e-54 216.5 150 80.0
BcaB03g15807 Brassica carinata HOM05D003134 ORTHO05D003500 5.0e-52 208.0 148 78.4
BcaC08g46286 Brassica carinata HOM05D003134 ORTHO05D003500 3.6e-50 201.8 148 77.0
C06p41530 Brassica napus HOM05D003134 ORTHO05D003500 6.3e-47 191.0 150 74.7
BolC6t39271H Brassica oleracea HOM05D003134 ORTHO05D003500 6.3e-47 191.0 150 74.7
A07p34840 Brassica napus HOM05D003134 ORTHO05D003500 1.4e-46 189.9 150 74.7
BraA07t31102Z Brassica rapa HOM05D003134 ORTHO05D003500 1.4e-46 189.9 150 74.7
BcaC08g46282 Brassica carinata HOM05D003134 ORTHO05D003500 3.1e-46 188.7 150 74.0
Carub.0002s1492 Capsella rubella HOM05D003134 ORTHO05D003500 4.5e-45 184.9 157 72.0
AL2G27290 Arabidopsis lyrata HOM05D003134 ORTHO05D003500 1.7e-44 183.0 151 71.5
CARHR061210 Cardamine hirsuta HOM05D003134 ORTHO05D003500 1.6e-42 176.4 155 67.7
Aa31LG4G14620 Aethionema arabicum HOM05D003134 ORTHO05D003500 2.3e-36 156.0 158 62.0
AT1G68430 Arabidopsis thaliana HOM05D003134 ORTHO05D003500 8.6e-36 154.1 151 64.9
THA.LOC104808293 Tarenaya hassleriana HOM05D003134 ORTHO05D003500 1.2e-32 143.7 164 56.7
Ciclev10016989m.g Citrus clementina HOM05D003134 ORTHO05D003500 1.0e-20 104.0 170 44.7
Cfa015852 Carpinus fangiana HOM05D003134 ORTHO05D003500 1.7e-20 103.2 155 48.4
Cfa015853 Carpinus fangiana HOM05D003134 ORTHO05D003500 1.7e-20 103.2 155 49.0
Prupe.1G315800 Prunus persica HOM05D003134 ORTHO05D003500 1.9e-19 99.8 150 46.7
TWI31G0745 Tripterygium wilfordii HOM05D003134 ORTHO05D003500 2.5e-19 99.4 165 44.8
Manes.06G065600 Manihot esculenta HOM05D003134 ORTHO05D003500 3.3e-19 99.0 158 44.3
Cfa015849 Carpinus fangiana HOM05D003134 ORTHO05D003500 7.3e-19 97.8 154 48.1
Cpa.g.sc65.57 Carica papaya HOM05D003134 ORTHO05D003500 1.2e-18 97.1 166 44.0
Sabra10G0091400 Salix brachista HOM05D003134 ORTHO05D003500 2.1e-18 96.3 156 44.2
Thecc.02G223300 Theobroma cacao HOM05D003134 ORTHO05D003500 4.7e-18 95.1 163 44.8
QL01p040313 Quercus lobata HOM05D003134 ORTHO05D003500 6.2e-18 94.7 168 44.0
CiPaw.05G241000 Carya illinoinensis HOM05D003134 ORTHO05D003500 1.8e-17 93.2 161 44.1
COL.COLO4_32156 Corchorus olitorius HOM05D003134 ORTHO05D003500 3.1e-17 92.4 166 42.8
MD16G1038900 Malus domestica HOM05D003134 ORTHO05D003500 3.1e-17 92.4 154 41.6
Duzib251G0591 Durio zibethinus HOM05D003134 ORTHO05D003500 4.0e-17 92.0 162 44.4
CSS0042149 Camellia sinensis var. sinensis HOM05D003134 ORTHO05D003500 8.9e-17 90.9 163 44.2
TAR374G1690 Trochodendron aralioides HOM05D003134 ORTHO05D003500 8.9e-17 90.9 155 41.9
Cpa.g.sc170.42 Carica papaya HOM05D003134 ORTHO05D003500 2.6e-16 89.4 169 40.8
Gohir.D02G171600 Gossypium hirsutum HOM05D003134 ORTHO05D003500 2.6e-16 89.4 161 43.5
Gorai.005G193000 Gossypium raimondii HOM05D003134 ORTHO05D003500 2.6e-16 89.4 161 43.5
Hma1.2p1_1109F.1_g258190 Hydrangea macrophylla HOM05D003134 ORTHO05D003500 2.6e-16 89.4 158 44.3
Lalb_Chr02g0145791 Lupinus albus HOM05D003134 ORTHO05D003500 3.4e-16 89.0 151 45.0
Sabra04G0066000 Salix brachista HOM05D003134 ORTHO05D003500 7.5e-16 87.8 152 44.1
Rhsim08G0083300 Rhododendron simsii HOM05D003134 ORTHO05D003500 1.3e-15 87.0 163 42.9
Potri.010G121300 Populus trichocarpa HOM05D003134 ORTHO05D003500 1.7e-15 86.7 154 39.6
Nn3g17932 Nelumbo nucifera HOM05D003134 ORTHO05D003500 3.7e-15 85.5 164 40.9
MD13G1036300 Malus domestica HOM05D003134 ORTHO05D003500 4.9e-15 85.1 152 42.1
Oeu012575.1 Olea europaea HOM05D003134 ORTHO05D003500 4.9e-15 85.1 164 41.5
Ciclev10013038m.g Citrus clementina HOM05D003134 ORTHO05D003500 6.4e-15 84.7 161 39.1
Gohir.A03G148500 Gossypium hirsutum HOM05D003134 ORTHO05D003500 1.1e-14 84.0 161 42.2
PGR042G1462 Punica granatum HOM05D003134 ORTHO05D003500 1.1e-14 84.0 164 40.9
Lj4P188T25 Lonicera japonica HOM05D003134 ORTHO05D003500 1.4e-14 83.6 156 43.6
Medtr1g110190 Medicago truncatula HOM05D003134 ORTHO05D003500 1.4e-14 83.6 152 44.7
Dinv33962 Davidia involucrata HOM05D003134 ORTHO05D003500 1.9e-14 83.2 159 41.5
TAR433G0003 Trochodendron aralioides HOM05D003134 ORTHO05D003500 1.9e-14 83.2 154 39.6
Glyma.20G119200 Glycine max HOM05D003134 ORTHO05D003500 3.2e-14 82.4 148 40.5
Oeu012577.1 Olea europaea HOM05D003134 ORTHO05D003500 3.2e-14 82.4 161 42.2
Prupe.3G146400 Prunus persica HOM05D003134 ORTHO05D003500 3.2e-14 82.4 169 40.2
Oeu039736.1 Olea europaea HOM05D003134 ORTHO05D003500 4.1e-14 82.0 163 41.1
FvH4_4g26860 Fragaria vesca HOM05D003134 ORTHO05D003500 5.4e-14 81.6 151 44.4
Lsat_1_v5_gn_3_80541 Lactuca sativa HOM05D003134 ORTHO05D003500 5.4e-14 81.6 154 44.2
MD17G1247700 Malus domestica HOM05D003134 ORTHO05D003500 5.4e-14 81.6 168 41.1
RcHm_v2.0_Chr4g0434621 Rosa chinensis HOM05D003134 ORTHO05D003500 5.4e-14 81.6 154 42.9
SGA_v2.0_scaffold49G18114 Striga asiatica HOM05D003134 ORTHO05D003500 5.4e-14 81.6 163 41.1
FAN22G0900 Fragaria x ananassa HOM05D003134 ORTHO05D003500 7.1e-14 81.3 150 44.0
CANSAT01G0067 Cannabis sativa HOM05D003134 ORTHO05D003500 1.6e-13 80.1 176 38.1
FAN12G3405 Fragaria x ananassa HOM05D003134 ORTHO05D003500 1.6e-13 80.1 150 43.3
PGR119G2525 Punica granatum HOM05D003134 ORTHO05D003500 3.5e-13 79.0 153 44.4
Duzib268G0372 Durio zibethinus HOM05D003134 ORTHO05D003500 4.6e-13 78.6 163 41.1
SalBow5G3107 Salvia bowleyana HOM05D003134 ORTHO05D003500 6.0e-13 78.2 151 39.7
SalBow5G4218 Salvia bowleyana HOM05D003134 ORTHO05D003500 6.0e-13 78.2 151 39.7
VMungo0720G1250 Vigna mungo HOM05D000260 ORTHO05D000318 6.0e-13 78.2 151 41.1
Atru.chr1.1630 Acer truncatum HOM05D003134 ORTHO05D003500 7.8e-13 77.8 156 38.5
Cc07_g08620 Coffea canephora HOM05D003134 ORTHO05D003500 1.0e-12 77.4 170 39.4
Manes.01G112200 Manihot esculenta HOM05D003134 ORTHO05D003500 1.0e-12 77.4 161 39.8
PGSC0003DMG400002449 Solanum tuberosum HOM05D003134 ORTHO05D003500 1.0e-12 77.4 170 35.9
Phvul.007G030600 Phaseolus vulgaris HOM05D003134 ORTHO05D003500 1.3e-12 77.0 150 42.0
Solyc03g034300.1 Solanum lycopersicum HOM05D003134 ORTHO05D003500 1.3e-12 77.0 157 39.5
Sc10g0001080 Simmondsia chinensis HOM05D003134 ORTHO05D003500 1.7e-12 76.6 161 37.9
ClCG01G005860 Citrullus lanatus HOM05D003134 ORTHO05D003500 2.3e-12 76.3 155 40.0
CANSAT78G1475 Cannabis sativa HOM05D003134 ORTHO05D003500 3.0e-12 75.9 174 39.7
PGSC0003DMG400024380 Solanum tuberosum HOM05D003134 ORTHO05D003500 3.0e-12 75.9 170 35.3
Psat6g225360 Pisum sativum HOM05D003134 ORTHO05D003500 3.9e-12 75.5 153 42.5
Solyc02g086260.1 Solanum lycopersicum HOM05D003134 ORTHO05D003500 3.9e-12 75.5 161 39.8
FAN03G2307 Fragaria x ananassa HOM05D003134 ORTHO05D003500 5.1e-12 75.1 163 39.9
TAR622G0779 Trochodendron aralioides HOM05D003134 ORTHO05D003500 5.1e-12 75.1 156 36.5
TAR622G1269 Trochodendron aralioides HOM05D003134 ORTHO05D003500 5.1e-12 75.1 156 36.5
MELO3C008147.2 Cucumis melo HOM05D003134 ORTHO05D003500 6.6e-12 74.7 167 37.7
AUR62009019 Chenopodium quinoa HOM05D003134 ORTHO05D003500 1.1e-11 73.9 172 39.0
Dinv34801 Davidia involucrata HOM05D003134 ORTHO05D003500 1.1e-11 73.9 159 39.0
FAN14G3652 Fragaria x ananassa HOM05D003134 ORTHO05D003500 1.1e-11 73.9 162 38.3
DCAR_021449 Daucus carota HOM05D003134 ORTHO05D003500 1.5e-11 73.6 158 38.0
FAN07G2257 Fragaria x ananassa HOM05D003134 ORTHO05D003500 1.5e-11 73.6 149 43.6
SalBow3G2725 Salvia bowleyana HOM05D003134 ORTHO05D003500 1.5e-11 73.6 153 39.2
TPR.G36596 Trifolium pratense HOM05D003134 ORTHO05D003500 1.5e-11 73.6 162 38.3
Manes.02G070500 Manihot esculenta HOM05D003134 ORTHO05D003500 1.9e-11 73.2 158 36.7
Migut.H00233 Erythranthe guttata HOM05D003134 ORTHO05D003500 3.3e-11 72.4 168 37.5
FAN17G2365 Fragaria x ananassa HOM05D003134 ORTHO05D003500 3.3e-11 72.4 150 40.0
Sopen03g007090 Solanum pennellii HOM05D003134 ORTHO05D003500 3.3e-11 72.4 160 37.5
Actinidia17642 Actinidia chinensis HOM05D003134 ORTHO05D003500 4.3e-11 72.0 153 39.9
CsaV3_2G033780 Cucumis sativus L. HOM05D003134 ORTHO05D003500 4.3e-11 72.0 170 37.6
Glyma.02G088600 Glycine max HOM05D003134 ORTHO05D003500 4.3e-11 72.0 161 39.1
Oeu008433.1 Olea europaea HOM05D003134 ORTHO05D003500 4.3e-11 72.0 163 37.4
Peaxi162Scf00104g00142 Petunia axillaris HOM05D003134 ORTHO05D003500 5.6e-11 71.6 150 41.3
FAN01G0579 Fragaria x ananassa HOM05D003134 ORTHO05D003500 7.3e-11 71.2 164 38.4
Gohir.D11G171400 Gossypium hirsutum HOM05D003134 ORTHO05D003500 7.3e-11 71.2 167 35.3
Gorai.007G183800 Gossypium raimondii HOM05D003134 ORTHO05D003500 7.3e-11 71.2 167 35.3
Potri.017G117866 Populus trichocarpa HOM05D003134 ORTHO05D003500 7.3e-11 71.2 151 39.7
ClCG11G007810 Citrullus lanatus HOM05D003134 ORTHO05D003500 9.5e-11 70.9 166 36.1
Lj5g0013847 Lotus japonicus HOM05D003134 ORTHO05D003500 9.5e-11 70.9 166 38.0
Sed0007756 Sechium edule HOM05D003134 ORTHO05D003500 9.5e-11 70.9 160 38.1
Gohir.A11G165400 Gossypium hirsutum HOM05D003134 ORTHO05D003500 1.2e-10 70.5 167 35.3
Psat3g098080 Pisum sativum HOM05D003134 ORTHO05D003500 1.2e-10 70.5 164 36.0
Potri.008G123800 Populus trichocarpa HOM05D003134 ORTHO05D003500 1.2e-10 70.5 101 47.5
Sed0003377 Sechium edule HOM05D003134 ORTHO05D003500 1.2e-10 70.5 153 35.9
EL10Ac2g04546 Beta vulgaris HOM05D003134 ORTHO05D003500 1.6e-10 70.1 171 36.8
Ca_08085_v3 Cicer arietinum L. HOM05D003134 ORTHO05D003500 1.6e-10 70.1 160 35.6
RcHm_v2.0_Chr1g0326241 Rosa chinensis HOM05D003134 ORTHO05D003500 1.6e-10 70.1 174 36.8
Medtr7g082520 Medicago truncatula HOM05D003134 ORTHO05D003500 2.1e-10 69.7 161 34.8
AUR62023283 Chenopodium quinoa HOM05D003134 ORTHO05D003500 3.6e-10 68.9 172 39.0
Glyma.18G294900 Glycine max HOM05D003134 ORTHO05D003500 3.6e-10 68.9 160 37.5
FAN10G2348 Fragaria x ananassa HOM05D003134 ORTHO05D003500 4.7e-10 68.6 162 37.0
PGR004G0132 Punica granatum HOM05D003134 ORTHO05D003500 4.7e-10 68.6 164 35.4
FAN02G1640 Fragaria x ananassa HOM05D003134 ORTHO05D003500 6.2e-10 68.2 164 38.4
Oeu036853.1 Olea europaea HOM05D003134 ORTHO05D003500 6.2e-10 68.2 161 35.4
Lalb_Chr10g0091341 Lupinus albus HOM05D003134 ORTHO05D003500 8.1e-10 67.8 156 38.5
MBI16_g37123_MAGBIO Magnolia biondii HOM05D003134 ORTHO05D003500 8.1e-10 67.8 161 36.0
Nitab4.5_0015828g0010 Nicotiana tabacum HOM05D003134 ORTHO05D003500 8.1e-10 67.8 164 37.2
Potri.004G097200 Populus trichocarpa HOM05D003134 ORTHO05D003500 8.1e-10 67.8 151 35.8
Oeu030792.1 Olea europaea HOM05D000260 ORTHO05D000318 1.1e-09 67.4 151 37.7
Cfa007900 Carpinus fangiana HOM05D003134 ORTHO05D003500 1.4e-09 67.0 172 33.7
FAN28G2684 Fragaria x ananassa HOM05D003134 ORTHO05D003500 1.4e-09 67.0 164 37.8
Sed0004988 Sechium edule HOM05D003134 ORTHO05D003500 1.4e-09 67.0 152 38.2
unitig_0.g841 Utricularia gibba HOM05D003134 ORTHO05D003500 1.4e-09 67.0 147 35.4
CsaV3_5G028830 Cucumis sativus L. HOM05D003134 ORTHO05D003500 1.8e-09 66.6 162 38.3
HanXRQChr12g0375681 Helianthus annuus HOM05D003134 ORTHO05D003500 1.8e-09 66.6 159 37.1
Nitab4.5_0000625g0110 Nicotiana tabacum HOM05D003134 ORTHO05D003500 1.8e-09 66.6 167 37.1
VMungo1383G0351 Vigna mungo HOM05D003134 ORTHO05D003500 2.4e-09 66.2 171 35.7
FAN10G3294 Fragaria x ananassa HOM05D000266 ORTHO05D000765 3.1e-09 65.9 164 36.6
Sp5g21880 Schrenkiella parvula HOM05D003134 ORTHO05D003500 3.1e-09 65.9 166 36.1
C06p43260 Brassica napus HOM05D003134 ORTHO05D003500 4.0e-09 65.5 165 36.4
FAN23G1965 Fragaria x ananassa HOM05D003134 ORTHO05D003500 4.0e-09 65.5 161 35.4
Lj1g0014230 Lotus japonicus HOM05D003134 ORTHO05D003500 4.0e-09 65.5 171 33.9
FAN12G3727 Fragaria x ananassa HOM05D003134 ORTHO05D003500 5.2e-09 65.1 93 46.2
Sp7g03820 Schrenkiella parvula HOM05D003134 ORTHO05D003500 5.2e-09 65.1 167 38.3
THA.LOC104823851 Tarenaya hassleriana HOM05D003134 ORTHO05D003500 5.2e-09 65.1 160 38.8
PSO170G0811 Papaver somniferum HOM05D003134 ORTHO05D003500 6.8e-09 64.7 170 34.1
Haze_14180 Corylus avellana HOM05D003134 ORTHO05D003500 8.9e-09 64.3 175 36.0
Duzib138G0856 Durio zibethinus HOM05D003134 ORTHO05D003500 8.9e-09 64.3 169 33.1
Lsat_1_v5_gn_2_81120 Lactuca sativa HOM05D003134 ORTHO05D003500 8.9e-09 64.3 172 35.5
ATR1125G046 Amborella trichopoda HOM05D003134 ORTHO05D003500 1.2e-08 63.9 169 33.7
Ah.16g101650 Amaranthus hybridus HOM05D003134 ORTHO05D003500 2.0e-08 63.2 164 34.1
BcaB03g15220 Brassica carinata HOM05D003134 ORTHO05D003500 2.0e-08 63.2 169 36.7
Nitab4.5_0000753g0120 Nicotiana tabacum HOM05D003134 ORTHO05D003500 2.0e-08 63.2 126 41.3
PSO017G0284 Papaver somniferum HOM05D003134 ORTHO05D003500 2.0e-08 63.2 170 36.5
Peaxi162Scf00394g00095 Petunia axillaris HOM05D003134 ORTHO05D003500 2.0e-08 63.2 109 43.1
CiPaw.03G063500 Carya illinoinensis HOM05D003134 ORTHO05D003500 2.6e-08 62.8 185 34.1
FvH4_7g03610 Fragaria vesca HOM05D003134 ORTHO05D003500 2.6e-08 62.8 166 36.7
FAN06G4960 Fragaria x ananassa HOM05D003134 ORTHO05D003500 2.6e-08 62.8 166 36.7
BraA07t30998Z Brassica rapa HOM05D003134 ORTHO05D003500 3.4e-08 62.4 167 37.7
Migut.L00500 Erythranthe guttata HOM05D003134 ORTHO05D003500 3.4e-08 62.4 168 37.5
Haze_24605 Corylus avellana HOM05D003134 ORTHO05D003500 4.4e-08 62.0 49 69.4
FAN16G3541 Fragaria x ananassa HOM05D003134 ORTHO05D003500 4.4e-08 62.0 162 37.0
MELO3C005343.2 Cucumis melo HOM05D003134 ORTHO05D003500 7.6e-08 61.2 159 37.1
Thhalv10019248m.g Eutrema salsugineum HOM05D003134 ORTHO05D003500 7.6e-08 61.2 167 35.9
A07p33710 Brassica napus HOM05D003134 ORTHO05D003500 1.3e-07 60.5 168 37.5
Duzib133G1507 Durio zibethinus HOM05D003134 ORTHO05D003500 1.3e-07 60.5 174 32.2
BcaC08g46122 Brassica carinata HOM05D003134 ORTHO05D003500 1.7e-07 60.1 166 36.7
PGSC0003DMG400026385 Solanum tuberosum HOM05D001447 ORTHO05D005923 2.2e-07 59.7 97 45.4
Phvul.008G007800 Phaseolus vulgaris HOM05D003134 ORTHO05D003500 2.9e-07 59.3 158 36.7
QL02p049588 Quercus lobata HOM05D003134 ORTHO05D003500 2.9e-07 59.3 184 34.2
Phvul.004G066700 Phaseolus vulgaris HOM05D003134 ORTHO05D003500 3.8e-07 58.9 143 35.7
THA.LOC104805579 Tarenaya hassleriana HOM05D003134 ORTHO05D003500 3.8e-07 58.9 177 33.9
Nn4g23933 Nelumbo nucifera HOM05D003134 ORTHO05D003500 1.1e-06 57.4 162 30.2
Lalb_Chr06g0165891 Lupinus albus HOM05D003134 ORTHO05D003500 1.4e-06 57.0 58 60.3
AL2G25140 Arabidopsis lyrata HOM05D003134 ORTHO05D003500 1.9e-06 56.6 167 35.9
ECA238G3055 Erigeron canadensis HOM05D003134 ORTHO05D003500 1.9e-06 56.6 164 34.1
Ah.10g037670 Amaranthus hybridus HOM05D003134 ORTHO05D003500 2.4e-06 56.2 164 35.4
QL02p050634 Quercus lobata HOM05D003134 ORTHO05D003500 2.4e-06 56.2 183 32.2


User provided reference genes

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