Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p14700 Brassica napus HOM05D005922 ORTHO05D006934 4.9e-64 247.7 127 100.0
BraA02t06537Z Brassica rapa HOM05D005922 ORTHO05D006934 4.9e-64 247.7 127 100.0
CARHR060740 Cardamine hirsuta HOM05D005922 ORTHO05D006934 5.8e-33 144.4 160 51.9
Sp5g23080 Schrenkiella parvula HOM05D005922 ORTHO05D006934 2.2e-32 142.5 172 49.4
Thhalv10018688m.g Eutrema salsugineum HOM05D005922 ORTHO05D006934 8.4e-32 140.6 171 49.1
AT1G68080 Arabidopsis thaliana HOM05D005922 ORTHO05D006934 7.1e-31 137.5 171 48.0
C06p37940 Brassica napus HOM05D005922 ORTHO05D006934 7.1e-31 137.5 169 47.3
BraA07t30847Z Brassica rapa HOM05D005922 ORTHO05D006934 1.2e-30 136.7 169 48.5
BcaB03g15398 Brassica carinata HOM05D005922 ORTHO05D006934 2.7e-30 135.6 166 48.2
BcaC08g45997 Brassica carinata HOM05D005922 ORTHO05D006934 2.7e-30 135.6 166 48.2
A07p32170 Brassica napus HOM05D005922 ORTHO05D006934 4.6e-30 134.8 169 47.3
BcaC08g45999 Brassica carinata HOM05D005922 ORTHO05D006934 1.0e-29 133.7 169 47.3
BolC6t38893H Brassica oleracea HOM05D005922 ORTHO05D006934 1.0e-29 133.7 169 47.3
AL2G26830 Arabidopsis lyrata HOM05D005922 ORTHO05D006934 1.9e-28 129.4 168 45.8
BolC2t08514H Brassica oleracea HOM05D005922 ORTHO05D006934 1.3e-27 126.7 74 86.5
Carub.0002s1456 Capsella rubella HOM05D005922 ORTHO05D006934 1.6e-27 126.3 170 44.1
THA.LOC104809799 Tarenaya hassleriana HOM05D005922 ORTHO05D006934 1.9e-23 112.8 176 40.3
Aa31LG10G3720 Aethionema arabicum HOM05D005922 ORTHO05D006934 5.1e-21 104.8 177 39.0
GSVIVG01011600001 Vitis vinifera HOM05D005922 ORTHO05D006934 1.8e-18 96.3 150 37.3
Thecc.02G304700 Theobroma cacao HOM05D005922 ORTHO05D006934 7.2e-15 84.3 136 39.7
CANSAT78G1412 Cannabis sativa HOM05D005922 ORTHO05D006934 9.4e-15 84.0 170 31.8
Potri.008G139000 Populus trichocarpa HOM05D005922 ORTHO05D006934 9.4e-15 84.0 166 31.3
Ciclev10015473m.g Citrus clementina HOM05D005922 ORTHO05D006934 1.6e-14 83.2 175 32.6
Cc11_g05840 Coffea canephora HOM05D005922 ORTHO05D006934 1.8e-13 79.7 174 31.6
RcHm_v2.0_Chr4g0442081 Rosa chinensis HOM05D005922 ORTHO05D006934 3.0e-13 79.0 166 31.3
Sc10g0003730 Simmondsia chinensis HOM05D005922 ORTHO05D006934 6.7e-13 77.8 178 29.8
QL03p038994 Quercus lobata HOM05D005922 ORTHO05D006934 8.8e-13 77.4 170 31.2
Dinv14365 Davidia involucrata HOM05D001297 ORTHO05D001135 1.1e-12 77.0 131 36.6
CiPaw.06G059000 Carya illinoinensis HOM05D005922 ORTHO05D006934 2.5e-12 75.9 169 32.0
FAN12G4156 Fragaria x ananassa HOM05D005922 ORTHO05D006934 9.7e-12 73.9 171 31.6
MD16G1013700 Malus domestica HOM05D005922 ORTHO05D006934 9.7e-12 73.9 166 31.3
FAN07G1633 Fragaria x ananassa HOM05D005922 ORTHO05D006934 1.3e-11 73.6 169 30.8
FAN17G1819 Fragaria x ananassa HOM05D005922 ORTHO05D006934 1.3e-11 73.6 171 31.6
Ca_11580_v3 Cicer arietinum L. HOM05D005922 ORTHO05D006934 1.7e-11 73.2 176 31.8
COL.COLO4_27589 Corchorus olitorius HOM05D005922 ORTHO05D006934 1.7e-11 73.2 167 32.9
Lj3A860T49 Lonicera japonica HOM05D005922 ORTHO05D006934 2.2e-11 72.8 174 30.5
CSS0037760 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 2.8e-11 72.4 181 30.4
Manes.17G088400 Manihot esculenta HOM05D005922 ORTHO05D006934 2.8e-11 72.4 169 31.4
HanXRQChr17g0566161 Helianthus annuus HOM05D005922 ORTHO05D006934 3.7e-11 72.0 176 28.4
TWI74G0639 Tripterygium wilfordii HOM05D005922 ORTHO05D006934 3.7e-11 72.0 167 30.5
FvH4_4g33040 Fragaria vesca HOM05D005922 ORTHO05D006934 4.8e-11 71.6 171 31.0
Lj4g0028223 Lotus japonicus HOM05D005922 ORTHO05D006934 4.8e-11 71.6 173 29.5
TAR622G0311 Trochodendron aralioides HOM05D005922 ORTHO05D006934 4.8e-11 71.6 181 29.3
Actinidia20108 Actinidia chinensis HOM05D005922 ORTHO05D006934 8.2e-11 70.9 181 28.7
FAN22G1644 Fragaria x ananassa HOM05D005922 ORTHO05D006934 8.2e-11 70.9 171 31.0
Prupe.1G337400 Prunus persica HOM05D005922 ORTHO05D006934 1.1e-10 70.5 165 29.1
Cpa.g.sc2.132 Carica papaya HOM05D005922 ORTHO05D006934 2.4e-10 69.3 175 29.7
arahy.Tifrunner.gnm1.ann1.DV72QU Arachis hypogaea HOM05D005922 ORTHO05D006934 3.1e-10 68.9 173 29.5
arahy.Tifrunner.gnm1.ann1.GW2J4P Arachis hypogaea HOM05D006503 ORTHO05D008116 4.1e-10 68.6 168 29.8
Lalb_Chr13g0293631 Lupinus albus HOM05D005922 ORTHO05D006934 4.1e-10 68.6 170 30.6
Psat7g084400 Pisum sativum HOM05D005922 ORTHO05D006934 4.1e-10 68.6 173 29.5
SalBow7G4797 Salvia bowleyana HOM05D005922 ORTHO05D006934 4.1e-10 68.6 185 28.1
ECA234G0994 Erigeron canadensis HOM05D005922 ORTHO05D006934 5.3e-10 68.2 176 27.8
Hund05787 Selenicereus undatus HOM05D005922 ORTHO05D006934 9.1e-10 67.4 191 25.7
Duzib248G0719 Durio zibethinus HOM05D005922 ORTHO05D006934 1.5e-09 66.6 169 31.4
AUR62002964 Chenopodium quinoa HOM05D005922 ORTHO05D006934 2.0e-09 66.2 177 28.2
Ah.03g138110 Amaranthus hybridus HOM05D005922 ORTHO05D006934 3.4e-09 65.5 177 25.4
arahy.Tifrunner.gnm1.ann1.F0VD4J Arachis hypogaea HOM05D005922 ORTHO05D006934 3.4e-09 65.5 173 30.1
Migut.O00731 Erythranthe guttata HOM05D005922 ORTHO05D006934 5.9e-09 64.7 162 27.8
PGR102G1589 Punica granatum HOM05D005922 ORTHO05D006934 5.9e-09 64.7 163 30.1
CAN.G282.103 Capsicum annuum HOM05D005922 ORTHO05D006934 7.7e-09 64.3 181 28.7
Peaxi162Scf01111g00310 Petunia axillaris HOM05D005922 ORTHO05D006934 7.7e-09 64.3 179 27.4
Phvul.002G181600 Phaseolus vulgaris HOM05D005922 ORTHO05D006934 7.7e-09 64.3 171 28.1
Rhsim09G0086000 Rhododendron simsii HOM05D005922 ORTHO05D006934 7.7e-09 64.3 181 27.6
MSTRG.418 Avicennia marina HOM05D005922 ORTHO05D006934 1.0e-08 63.9 177 27.7
DCAR_026820 Daucus carota HOM05D005922 ORTHO05D006934 1.3e-08 63.5 181 27.6
Lsat_1_v5_gn_4_23861 Lactuca sativa HOM05D005922 ORTHO05D006934 1.3e-08 63.5 173 27.7
AUR62007770 Chenopodium quinoa HOM05D005922 ORTHO05D006934 1.7e-08 63.2 177 27.1
Migut.L00620 Erythranthe guttata HOM05D005922 ORTHO05D006934 1.7e-08 63.2 162 28.4
Sabra08G0105600 Salix brachista HOM05D005922 ORTHO05D006934 1.7e-08 63.2 196 26.0
Nitab4.5_0000521g0110 Nicotiana tabacum HOM05D005922 ORTHO05D006934 2.2e-08 62.8 185 27.0
TPR.G5128 Trifolium pratense HOM05D005922 ORTHO05D006934 2.2e-08 62.8 147 29.3
Nitab4.5_0001935g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 2.9e-08 62.4 184 27.2
Solyc01g005100.4 Solanum lycopersicum HOM05D005922 ORTHO05D006934 2.9e-08 62.4 181 27.6
Sopen01g001120 Solanum pennellii HOM05D005922 ORTHO05D006934 2.9e-08 62.4 181 27.6
Nn4g24501 Nelumbo nucifera HOM05D005922 ORTHO05D006934 5.0e-08 61.6 177 28.2
Glyma.08G093700 Glycine max HOM05D005922 ORTHO05D006934 6.5e-08 61.2 173 27.2
Gorai.012G183700 Gossypium raimondii HOM05D005922 ORTHO05D006934 6.5e-08 61.2 167 29.3
Eucgr.B02658 Eucalyptus grandis HOM05D005922 ORTHO05D006934 8.5e-08 60.8 177 26.6
PSO017G1338 Papaver somniferum HOM05D005922 ORTHO05D006934 1.1e-07 60.5 165 26.7
VMungo0251G2725 Vigna mungo HOM05D005922 ORTHO05D006934 1.4e-07 60.1 163 27.6
CSS0049283 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 1.9e-07 59.7 77 42.9
CDE05G0039 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 2.5e-07 59.3 153 28.1
PGSC0003DMG400022790 Solanum tuberosum HOM05D005922 ORTHO05D006934 3.2e-07 58.9 181 27.1
PSO478G3575 Papaver somniferum HOM05D005922 ORTHO05D006934 5.5e-07 58.2 165 26.7
Gohir.A04G143900 Gossypium hirsutum HOM05D005922 ORTHO05D006934 7.2e-07 57.8 131 31.3
Sed0026869 Sechium edule HOM05D005922 ORTHO05D006934 7.2e-07 57.8 146 24.7
MBI19_g25220_MAGBIO Magnolia biondii HOM05D005922 ORTHO05D006934 9.4e-07 57.4 152 28.9
SHI04278 Sapria himalayana HOM05D005922 ORTHO05D006934 1.6e-06 56.6 162 24.7
Gohir.D04G188200 Gossypium hirsutum HOM05D005922 ORTHO05D006934 2.1e-06 56.2 131 30.5
EL10Ac6g14554 Beta vulgaris HOM05D005922 ORTHO05D006934 4.7e-06 55.1 177 26.0
ClCG11G001170 Citrullus lanatus HOM05D005922 ORTHO05D006934 4.7e-06 55.1 146 26.7
CsaV3_5G013220 Cucumis sativus L. HOM05D005922 ORTHO05D006934 4.7e-06 55.1 146 26.0
HPP92_016714 Vanilla planifolia HOM05D005922 ORTHO05D006934 4.7e-06 55.1 150 28.0
MELO3C020028.2 Cucumis melo HOM05D005922 ORTHO05D006934 7.9e-06 54.3 146 26.0


User provided reference genes

Program Settings