Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p12440 Brassica napus HOM05D005379 ORTHO05D006661 7.5e-52 206.8 100 100.0
BraA02t06308Z Brassica rapa HOM05D005379 ORTHO05D006661 6.4e-51 203.8 100 98.0
BcaB08g35480 Brassica carinata HOM05D005379 ORTHO05D006661 4.9e-35 151.0 80 91.2
BcaC04g20721 Brassica carinata HOM05D005379 ORTHO05D006661 4.2e-34 147.9 80 88.8
C09p39890 Brassica napus HOM05D005379 ORTHO05D006661 4.2e-34 147.9 80 88.8
BolC9t56888H Brassica oleracea HOM05D005379 ORTHO05D006661 4.2e-34 147.9 80 88.8
A10p07900 Brassica napus HOM05D005379 ORTHO05D006661 5.4e-34 147.5 80 88.8
BraSC35t46008Z Brassica rapa HOM05D005379 ORTHO05D006661 5.4e-34 147.5 80 88.8
Sp6g13420 Schrenkiella parvula HOM05D005379 ORTHO05D006661 5.4e-34 147.5 80 90.0
AT5G51220 Arabidopsis thaliana HOM05D005379 ORTHO05D006661 6.6e-32 140.6 80 83.8
CARHR256800 Cardamine hirsuta HOM05D005379 ORTHO05D006661 1.1e-31 139.8 80 82.5
Thhalv10014342m.g Eutrema salsugineum HOM05D005379 ORTHO05D006661 1.5e-31 139.4 80 82.5
Aa31LG3G7760 Aethionema arabicum HOM05D005379 ORTHO05D006661 1.9e-31 139.0 80 82.5
AL8G25500 Arabidopsis lyrata HOM05D005379 ORTHO05D006661 1.9e-31 139.0 80 82.5
Carub.0008s1126 Capsella rubella HOM05D005379 ORTHO05D006661 1.9e-31 139.0 80 82.5
COL.COLO4_37344 Corchorus olitorius HOM05D003586 ORTHO05D004036 8.1e-30 133.7 90 71.1
THA.LOC104811535 Tarenaya hassleriana HOM05D005379 ORTHO05D006661 8.1e-30 133.7 80 78.8
BcaC03g14620 Brassica carinata HOM05D005379 ORTHO05D006661 1.3e-27 126.3 67 88.1
BolC2t08192H Brassica oleracea HOM05D005379 ORTHO05D006661 2.9e-27 125.2 69 85.5
MD07G1249400 Malus domestica HOM05D005379 ORTHO05D006661 2.9e-27 125.2 80 73.8
Sabra03G0109800 Salix brachista HOM05D005379 ORTHO05D006661 3.8e-27 124.8 99 60.6
Phvul.006G202400 Phaseolus vulgaris HOM05D005379 ORTHO05D006661 6.4e-27 124.0 99 60.6
TWI23G1062 Tripterygium wilfordii HOM05D005379 ORTHO05D006661 8.4e-27 123.6 80 72.5
CAN.G174.21 Capsicum annuum HOM05D005379 ORTHO05D006661 1.9e-26 122.5 80 70.0
Ciclev10005581m.g Citrus clementina HOM05D005379 ORTHO05D006661 1.9e-26 122.5 80 73.8
Potri.003G151600 Populus trichocarpa HOM05D005379 ORTHO05D006661 1.9e-26 122.5 99 59.6
QL09p028045 Quercus lobata HOM05D005379 ORTHO05D006661 1.9e-26 122.5 101 59.4
Nitab4.5_0000262g0030 Nicotiana tabacum HOM05D005379 ORTHO05D006661 2.4e-26 122.1 80 71.2
Peaxi162Scf00167g00730 Petunia axillaris HOM05D005379 ORTHO05D006661 2.4e-26 122.1 80 70.0
Solyc06g034100.4 Solanum lycopersicum HOM05D005379 ORTHO05D006661 2.4e-26 122.1 80 70.0
Sopen06g010750 Solanum pennellii HOM05D005379 ORTHO05D006661 2.4e-26 122.1 80 70.0
TPR.G9516 Trifolium pratense HOM05D005379 ORTHO05D006661 3.2e-26 121.7 80 68.8
Lj1A584T32 Lonicera japonica HOM05D005379 ORTHO05D006661 4.2e-26 121.3 80 70.0
arahy.Tifrunner.gnm1.ann1.3L844V Arachis hypogaea HOM05D005379 ORTHO05D006661 5.4e-26 120.9 79 70.9
Nitab4.5_0000448g0020 Nicotiana tabacum HOM05D005379 ORTHO05D006661 5.4e-26 120.9 80 70.0
Peaxi162Scf00304g01113 Petunia axillaris HOM05D005379 ORTHO05D006661 5.4e-26 120.9 80 70.0
Dinv06588 Davidia involucrata HOM05D005379 ORTHO05D006661 7.1e-26 120.6 80 71.2
ECA233G0107 Erigeron canadensis HOM05D003586 ORTHO05D004036 7.1e-26 120.6 98 59.2
Lsat_1_v5_gn_8_9541 Lactuca sativa HOM05D005379 ORTHO05D006661 7.1e-26 120.6 95 60.0
MD01G1177600 Malus domestica HOM05D005379 ORTHO05D006661 7.1e-26 120.6 80 71.2
PSO063G0621 Papaver somniferum HOM05D005379 ORTHO05D006661 7.1e-26 120.6 80 71.2
PSO782G5074 Papaver somniferum HOM05D005379 ORTHO05D006661 7.1e-26 120.6 80 71.2
BcaB05g24017 Brassica carinata HOM05D005379 ORTHO05D006661 9.3e-26 120.2 66 87.9
CDE11G0172 Ceratophyllum demersum HOM05D005379 ORTHO05D006661 1.2e-25 119.8 99 60.6
Glyma.15G056200 Glycine max HOM05D005379 ORTHO05D006661 1.2e-25 119.8 80 70.0
Psat1g214640 Pisum sativum HOM05D005379 ORTHO05D006661 1.2e-25 119.8 80 68.8
Prupe.2G273100 Prunus persica HOM05D005379 ORTHO05D006661 1.2e-25 119.8 80 68.8
ECA238G1883 Erigeron canadensis HOM05D005379 ORTHO05D006661 1.6e-25 119.4 80 67.5
Medtr2g009320 Medicago truncatula HOM05D005379 ORTHO05D006661 1.6e-25 119.4 80 67.5
Nitab4.5_0010756g0010 Nicotiana tabacum HOM05D005379 ORTHO05D006661 1.6e-25 119.4 80 68.8
vmacro06833 Vaccinium macrocarpon HOM05D005379 ORTHO05D006661 1.6e-25 119.4 80 68.8
Zm00001eb105230 Zea mays HOM05D005379 ORTHO05D006661 1.6e-25 119.4 81 69.1
Ca_00152_v3 Cicer arietinum L. HOM05D005379 ORTHO05D006661 2.1e-25 119.0 80 67.5
Glyma.08G176800 Glycine max HOM05D005379 ORTHO05D006661 2.1e-25 119.0 80 68.8
HanXRQChr08g0222701 Helianthus annuus HOM05D005379 ORTHO05D006661 2.1e-25 119.0 98 58.2
Nitab4.5_0002211g0080 Nicotiana tabacum HOM05D005379 ORTHO05D006661 2.1e-25 119.0 80 68.8
VMungo0540G0153 Vigna mungo HOM05D005379 ORTHO05D006661 2.1e-25 119.0 80 68.8
GSVIVG01013977001 Vitis vinifera HOM05D005379 ORTHO05D006661 2.1e-25 119.0 80 67.5
Actinidia31774 Actinidia chinensis HOM05D005379 ORTHO05D006661 2.7e-25 118.6 80 68.8
FvH4_7g27000 Fragaria vesca HOM05D005379 ORTHO05D006661 3.5e-25 118.2 80 70.0
FAN06G0815 Fragaria x ananassa HOM05D005379 ORTHO05D006661 3.5e-25 118.2 80 70.0
FAN06G1013 Fragaria x ananassa HOM05D005379 ORTHO05D006661 3.5e-25 118.2 80 70.0
FAN10G0849 Fragaria x ananassa HOM05D005379 ORTHO05D006661 3.5e-25 118.2 80 70.0
Zm00001eb321690 Zea mays HOM05D005379 ORTHO05D006661 3.5e-25 118.2 99 58.6
CANSAT56G0595 Cannabis sativa HOM05D005379 ORTHO05D006661 4.6e-25 117.9 80 68.8
CANSAT56G1299 Cannabis sativa HOM05D005379 ORTHO05D006661 4.6e-25 117.9 80 68.8
Manes.14G038300 Manihot esculenta HOM05D005379 ORTHO05D006661 4.6e-25 117.9 80 68.8
Oeu022464.1 Olea europaea HOM05D005379 ORTHO05D006661 4.6e-25 117.9 80 67.5
Rhsim03G0161700 Rhododendron simsii HOM05D005379 ORTHO05D006661 4.6e-25 117.9 80 68.8
Sed0000219 Sechium edule HOM05D005379 ORTHO05D006661 4.6e-25 117.9 80 68.8
CiPaw.08G041400 Carya illinoinensis HOM05D005379 ORTHO05D006661 6.0e-25 117.5 80 67.5
Gohir.A07G043200 Gossypium hirsutum HOM05D005379 ORTHO05D006661 6.0e-25 117.5 80 71.2
Gohir.D07G047600 Gossypium hirsutum HOM05D005379 ORTHO05D006661 6.0e-25 117.5 80 71.2
Gorai.001G050800 Gossypium raimondii HOM05D005379 ORTHO05D006661 6.0e-25 117.5 80 71.2
Lj3g0027387 Lotus japonicus HOM05D005379 ORTHO05D006661 6.0e-25 117.5 80 68.8
TAR374G0427 Trochodendron aralioides HOM05D005379 ORTHO05D006661 6.0e-25 117.5 80 68.8
CANSAT56G1106 Cannabis sativa HOM05D005379 ORTHO05D006661 7.8e-25 117.1 80 68.8
AUR62015453 Chenopodium quinoa HOM05D005379 ORTHO05D006661 7.8e-25 117.1 80 68.8
Lalb_Chr05g0217631 Lupinus albus HOM05D005379 ORTHO05D006661 7.8e-25 117.1 80 67.5
Os07g0490300 Oryza sativa ssp. japonica HOM05D005379 ORTHO05D006661 7.8e-25 117.1 80 67.5
PGR004G0100 Punica granatum HOM05D005379 ORTHO05D006661 7.8e-25 117.1 80 67.5
RcHm_v2.0_Chr1g0373791 Rosa chinensis HOM05D005379 ORTHO05D006661 7.8e-25 117.1 80 68.8
Hund11852 Selenicereus undatus HOM05D005379 ORTHO05D006661 7.8e-25 117.1 80 68.8
arahy.Tifrunner.gnm1.ann1.8RST7H Arachis hypogaea HOM05D005379 ORTHO05D006661 1.0e-24 116.7 74 73.0
EL10Ac3g05878 Beta vulgaris HOM05D005379 ORTHO05D006661 1.0e-24 116.7 80 70.0
CANSAT56G1775 Cannabis sativa HOM05D005379 ORTHO05D006661 1.0e-24 116.7 80 67.5
AUR62002241 Chenopodium quinoa HOM05D005379 ORTHO05D006661 1.0e-24 116.7 80 68.8
HanXRQChr07g0205531 Helianthus annuus HOM05D005379 ORTHO05D006661 1.0e-24 116.7 80 67.5
Thecc.03G149400 Theobroma cacao HOM05D005379 ORTHO05D006661 1.0e-24 116.7 80 71.2
Actinidia31671 Actinidia chinensis HOM05D005379 ORTHO05D006661 1.3e-24 116.3 80 67.5
Ah.13g071160 Amaranthus hybridus HOM05D005379 ORTHO05D006661 1.3e-24 116.3 80 70.0
TAR375G0328 Trochodendron aralioides HOM05D005379 ORTHO05D006661 1.3e-24 116.3 80 67.5
Cfa013572 Carpinus fangiana HOM05D005379 ORTHO05D006661 1.7e-24 115.9 80 66.2
Haze_22191 Corylus avellana HOM05D005379 ORTHO05D006661 1.7e-24 115.9 80 66.2
MBI04_g36330_MAGBIO Magnolia biondii HOM05D005379 ORTHO05D006661 1.7e-24 115.9 80 66.2
Hund04565 Selenicereus undatus HOM05D005379 ORTHO05D006661 1.7e-24 115.9 80 70.0
FAN03G3283 Fragaria x ananassa HOM05D005379 ORTHO05D006661 2.3e-24 115.5 80 68.8
MBI04_g38758_MAGBIO Magnolia biondii HOM05D005379 ORTHO05D006661 2.3e-24 115.5 80 67.5
CsaV3_6G041840 Cucumis sativus L. HOM05D005379 ORTHO05D006661 3.0e-24 115.2 80 66.2
ClCG01G015600 Citrullus lanatus HOM05D005379 ORTHO05D006661 3.9e-24 114.8 99 58.6
Migut.F00521 Erythranthe guttata HOM05D005379 ORTHO05D006661 5.1e-24 114.4 80 70.0
ATR0057G081 Amborella trichopoda HOM05D005379 ORTHO05D006661 6.6e-24 114.0 80 66.2
MELO3C008037.2 Cucumis melo HOM05D005379 ORTHO05D006661 6.6e-24 114.0 80 65.0
Eucgr.K00130 Eucalyptus grandis HOM05D005379 ORTHO05D006661 6.6e-24 114.0 80 65.0
HanXRQChr05g0139501 Helianthus annuus HOM05D005379 ORTHO05D006661 6.6e-24 114.0 98 58.2
HPP92_009947 Vanilla planifolia HOM05D005379 ORTHO05D006227 8.7e-24 113.6 80 66.2
CSS0027857 Camellia sinensis var. sinensis HOM05D005379 ORTHO05D006661 1.1e-23 113.2 80 65.0
Cpa.g.sc13.263 Carica papaya HOM05D005379 ORTHO05D006661 1.1e-23 113.2 79 69.6
Oeu042535.3 Olea europaea HOM05D005379 ORTHO05D006661 1.1e-23 113.2 80 63.8
Sc18g0007310 Simmondsia chinensis HOM05D005379 ORTHO05D006661 1.5e-23 112.8 80 66.2
MSTRG.8845 Avicennia marina HOM05D005379 ORTHO05D006661 1.9e-23 112.5 80 68.8
SalBow5G2200 Salvia bowleyana HOM05D005379 ORTHO05D006661 1.9e-23 112.5 80 68.8
SalBow7G1847 Salvia bowleyana HOM05D005379 ORTHO05D006661 1.9e-23 112.5 80 68.8
SalBow7G3941 Salvia bowleyana HOM05D005379 ORTHO05D006661 1.9e-23 112.5 80 68.8
unitig_0.g2509 Utricularia gibba HOM05D005379 ORTHO05D006661 4.3e-23 111.3 80 67.5
Cc02_g04670 Coffea canephora HOM05D005379 ORTHO05D006661 5.6e-23 110.9 80 66.2
SGA_v2.0_scaffold60G20811 Striga asiatica HOM05D005379 ORTHO05D006661 9.6e-23 110.2 80 66.2
DCAR_018078 Daucus carota HOM05D005379 ORTHO05D006661 3.6e-22 108.2 92 56.5
Hma1.2p1_0456F.1_g156820 Hydrangea macrophylla HOM05D005379 ORTHO05D006661 1.5e-20 102.8 114 48.2
AagrBONN_evm.TU.Sc2ySwM_228.472 Anthoceros agrestis HOM05D005379 ORTHO05D006661 8.7e-16 87.0 80 46.2
Mapoly0029s0089 Marchantia polymorpha HOM05D005379 ORTHO05D006661 4.3e-15 84.7 80 51.2
Pp3c8_7310 Physcomitrium patens HOM05D005379 ORTHO05D006661 2.1e-14 82.4 80 46.2
Manes.06G131601 Manihot esculenta HOM05D005379 ORTHO05D006661 1.2e-12 76.6 46 80.4
CBR_g48514 Chara braunii HOM05D005379 ORTHO05D006661 4.5e-12 74.7 80 42.5
C02p20560 Brassica napus HOM05D005379 ORTHO05D006661 7.6e-12 73.9 52 69.2
SMO361G0220 Selaginella moellendorffii HOM05D005379 ORTHO05D006661 4.9e-11 71.2 80 42.5
HPP92_009968 Vanilla planifolia HOM05D005379 ORTHO05D006661 6.7e-08 60.8 37 70.3
MCO01G548 Micromonas commoda HOM05D005379 ORTHO05D006661 7.4e-07 57.4 80 37.5


User provided reference genes

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