Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 1.2e-137 493.0 228 100.0
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 3.6e-134 481.5 228 97.4
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 1.8e-133 479.2 228 96.5
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 6.8e-133 477.2 234 96.2
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 1.5e-132 476.1 229 96.9
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 3.3e-119 431.8 229 89.1
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 3.6e-118 428.3 222 89.6
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 3.8e-115 418.3 232 87.1
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 3.8e-115 418.3 232 87.1
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 9.3e-106 387.1 223 79.4
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 5.6e-103 377.9 195 94.4
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 2.5e-95 352.4 222 68.9
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 2.5e-95 352.4 221 72.4
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 7.4e-95 350.9 225 70.2
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 2.1e-94 349.4 190 84.7
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 4.8e-94 348.2 187 87.7
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.1e-93 347.1 222 68.9
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.1e-93 347.1 222 68.9
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 1.2e-92 343.6 187 84.5
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 1.5e-92 343.2 223 69.1
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 3.4e-92 342.0 216 73.1
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 5.8e-92 341.3 187 86.1
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 1.3e-91 340.1 229 66.8
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 2.9e-91 339.0 221 67.0
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 2.9e-91 339.0 221 67.0
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 4.9e-91 338.2 218 68.8
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 4.9e-91 338.2 222 68.5
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 6.4e-91 337.8 187 85.6
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 6.4e-91 337.8 220 68.6
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 1.4e-90 336.7 217 69.6
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 1.4e-90 336.7 228 66.7
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 1.4e-90 336.7 217 68.7
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 2.5e-90 335.9 222 67.6
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 3.2e-90 335.5 215 70.7
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 4.2e-90 335.1 215 68.8
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 9.3e-90 334.0 224 68.3
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 9.3e-90 334.0 229 66.4
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 1.6e-89 333.2 223 68.6
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 4.6e-89 331.6 224 67.4
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 6.0e-89 331.3 213 70.0
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 7.9e-89 330.9 225 66.7
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 1.8e-88 329.7 217 68.7
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 1.8e-88 329.7 222 66.2
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 2.3e-88 329.3 219 68.9
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 3.0e-88 328.9 230 66.5
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 3.0e-88 328.9 217 67.3
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 8.7e-88 327.4 220 68.2
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 8.7e-88 327.4 219 65.3
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 8.7e-88 327.4 218 67.4
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 1.5e-87 326.6 217 68.2
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 1.5e-87 326.6 219 65.8
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 1.5e-87 326.6 231 64.5
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 1.9e-87 326.2 217 66.8
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 1.9e-87 326.2 227 67.0
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 1.9e-87 326.2 218 66.5
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 7.4e-87 324.3 221 66.5
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 7.4e-87 324.3 228 63.6
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 9.6e-87 323.9 217 66.8
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 9.6e-87 323.9 222 66.2
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 1.3e-86 323.6 220 66.4
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 1.3e-86 323.6 218 66.5
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 2.1e-86 322.8 218 64.7
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 2.1e-86 322.8 219 67.6
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 6.2e-86 321.2 219 67.1
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 5.3e-85 318.2 220 65.5
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 9.0e-85 317.4 218 64.7
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 1.5e-84 316.6 220 65.0
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 2.6e-84 315.8 229 62.9
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 3.4e-84 315.5 218 64.2
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 5.8e-84 314.7 217 65.0
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 7.6e-84 314.3 220 65.9
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 2.9e-83 312.4 221 64.3
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 6.5e-83 311.2 220 65.9
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 2.5e-82 309.3 217 66.4
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 3.2e-82 308.9 235 62.6
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 9.3e-82 307.4 216 63.0
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 2.1e-81 306.2 259 56.4
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 4.6e-81 305.1 223 63.2
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 1.1e-79 300.4 227 59.0
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.5e-79 300.1 190 68.9
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 1.5e-79 300.1 219 61.6
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 2.5e-79 299.3 225 61.3
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 1.1e-77 293.9 234 61.5
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.4e-77 293.5 186 68.3
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 4.1e-77 292.0 219 60.3
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 4.1e-77 292.0 191 71.2
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 1.3e-75 287.0 190 68.9
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 1.3e-75 287.0 194 68.0
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 7.2e-74 281.2 267 53.2
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 7.2e-74 281.2 194 68.0
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 8.8e-72 274.2 197 63.5
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 1.5e-71 273.5 184 68.5
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 5.7e-71 271.6 184 67.9
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 2.2e-70 269.6 186 66.1
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 2.8e-70 269.2 201 63.2
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 4.1e-69 265.4 186 65.6
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 4.1e-69 265.4 214 57.9
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 1.0e-67 260.8 196 61.2
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 1.3e-67 260.4 182 64.8
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 1.3e-67 260.4 182 64.8
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 1.7e-67 260.0 183 66.1
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 2.2e-67 259.6 216 59.7
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 5.5e-66 255.0 185 63.2
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 2.1e-65 253.1 218 55.5
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 2.1e-65 253.1 218 55.5
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 3.6e-65 252.3 219 56.2
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 3.9e-64 248.8 195 59.5
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 3.5e-60 235.7 200 55.0
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 4.5e-60 235.3 219 54.3
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 5.0e-59 231.9 193 56.0
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 2.2e-51 206.5 214 46.3
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 9.4e-50 201.1 152 61.2
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 1.2e-47 194.1 133 63.2
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 4.4e-47 192.2 128 68.8
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 6.6e-35 151.8 84 72.6
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 9.5e-34 147.9 77 75.3
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 2.3e-19 100.1 188 36.7
AL8G25960 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 2.8e-09 66.6 36 86.1
CARHR264550 Cardamine hirsuta HOM05D006795 ORTHO05D008573 1.8e-08 63.9 29 89.7
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 2.6e-07 60.1 61 37.7


User provided reference genes

Program Settings