Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p11710 Brassica napus HOM05D002831 ORTHO05D010484 2.4e-59 231.9 111 100.0
Carub.0008s1269 Capsella rubella HOM05D002831 ORTHO05D010484 1.9e-11 72.8 37 86.5
CARHR233120 Cardamine hirsuta HOM05D002831 ORTHO05D010484 1.8e-09 66.2 37 78.4
BraA02t06236Z Brassica rapa HOM05D002831 ORTHO05D107857 2.3e-09 65.9 101 46.5
Carub.0007s1529 Capsella rubella HOM05D002831 ORTHO05D010484 2.3e-09 65.9 37 78.4
BraA01t01649Z Brassica rapa HOM05D002831 ORTHO05D010484 5.1e-09 64.7 47 66.0
BolC1t02050H Brassica oleracea HOM05D002831 ORTHO05D010484 6.7e-09 64.3 36 77.8
Potri.004G080000 Populus trichocarpa HOM05D002831 ORTHO05D010484 6.7e-09 64.3 37 75.7
Potri.017G143300 Populus trichocarpa HOM05D002831 ORTHO05D010484 8.8e-09 63.9 40 72.5
CiPaw.06G003400 Carya illinoinensis HOM05D002831 ORTHO05D010484 1.1e-08 63.5 37 73.0
CiPaw.06G003200 Carya illinoinensis HOM05D002831 ORTHO05D010484 1.9e-08 62.8 37 70.3
ClCG05G008350 Citrullus lanatus HOM05D002831 ORTHO05D010484 1.9e-08 62.8 56 57.1
Manes.06G152150 Manihot esculenta HOM05D002831 ORTHO05D010484 4.3e-08 61.6 37 75.7
CARHR233140 Cardamine hirsuta HOM05D002831 ORTHO05D010484 5.7e-08 61.2 36 69.4
MD01G1208000 Malus domestica HOM05D002831 ORTHO05D010484 5.7e-08 61.2 35 77.1
Manes.14G022900 Manihot esculenta HOM05D002831 ORTHO05D010484 5.7e-08 61.2 37 75.7
Nn1g01626 Nelumbo nucifera HOM05D002831 ORTHO05D010484 5.7e-08 61.2 40 67.5
Nitab4.5_0003825g0100 Nicotiana tabacum HOM05D002831 ORTHO05D010484 5.7e-08 61.2 72 41.7
Prupe.2G300500 Prunus persica HOM05D002831 ORTHO05D010484 5.7e-08 61.2 35 77.1
Sabra04G0053100 Salix brachista HOM05D002831 ORTHO05D004341 5.7e-08 61.2 36 72.2
arahy.Tifrunner.gnm1.ann1.VWVY78 Arachis hypogaea HOM05D002831 ORTHO05D010484 7.4e-08 60.8 35 74.3
Gohir.A11G012000 Gossypium hirsutum HOM05D002831 ORTHO05D010484 7.4e-08 60.8 37 70.3
Gohir.D11G011200 Gossypium hirsutum HOM05D002831 ORTHO05D010484 7.4e-08 60.8 37 70.3
Atru.ctg97_1.17 Acer truncatum HOM05D002831 ORTHO05D010484 9.7e-08 60.5 37 73.0
A03p56200 Brassica napus HOM05D002831 ORTHO05D010484 9.7e-08 60.5 58 46.6
BraA03t14690Z Brassica rapa HOM05D002831 ORTHO05D010484 9.7e-08 60.5 58 46.6
Cc02_g02410 Coffea canephora HOM05D002831 ORTHO05D010484 1.7e-07 59.7 37 70.3
BolC1t02047H Brassica oleracea HOM05D002831 ORTHO05D010484 2.8e-07 58.9 32 78.1
BraA01t01646Z Brassica rapa HOM05D002831 ORTHO05D010484 2.8e-07 58.9 32 78.1
Peaxi162Scf00444g00118 Petunia axillaris HOM05D002831 ORTHO05D010484 2.8e-07 58.9 41 61.0
Glyma.10G231251 Glycine max HOM05D002831 ORTHO05D010484 4.8e-07 58.2 38 68.4
MD07G1278600 Malus domestica HOM05D002831 ORTHO05D010484 4.8e-07 58.2 35 71.4
Glyma.09G132600 Glycine max HOM05D002831 ORTHO05D010484 6.3e-07 57.8 32 75.0
Glyma.16G179250 Glycine max HOM05D002831 ORTHO05D010484 6.3e-07 57.8 32 75.0
Glyma.20G162551 Glycine max HOM05D002831 ORTHO05D010484 6.3e-07 57.8 38 65.8
Gorai.004G117400 Gossypium raimondii HOM05D002831 ORTHO05D004341 6.3e-07 57.8 36 69.4
Thecc.03G183800 Theobroma cacao HOM05D002831 ORTHO05D010484 8.2e-07 57.4 37 67.6
BolC7t45935H Brassica oleracea HOM05D002831 ORTHO05D010484 1.4e-06 56.6 57 45.6
Prupe.7G027400 Prunus persica HOM05D002831 ORTHO05D010484 1.8e-06 56.2 33 69.7
Lalb_Chr02g0141241 Lupinus albus HOM05D002831 ORTHO05D010484 2.4e-06 55.8 37 67.6
Nitab4.5_0000084g0420 Nicotiana tabacum HOM05D002831 ORTHO05D010484 5.3e-06 54.7 40 57.5
Gohir.D09G177300 Gossypium hirsutum HOM05D002831 ORTHO05D010484 9.1e-06 53.9 37 64.9


User provided reference genes

Program Settings