Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p11120 Brassica napus HOM05D001465 ORTHO05D001434 2.7e-23 111.3 62 100.0
BcaC03g14429 Brassica carinata HOM05D001465 ORTHO05D001434 8.3e-17 89.7 62 88.7
C02p18440 Brassica napus HOM05D001465 ORTHO05D001434 7.8e-15 83.2 61 85.2
AT5G53350 Arabidopsis thaliana HOM05D001465 ORTHO05D001434 3.9e-14 80.9 55 81.8
BcaB05g22033 Brassica carinata HOM05D001465 ORTHO05D001434 3.9e-14 80.9 55 83.6
AL8G28060 Arabidopsis lyrata HOM05D001465 ORTHO05D001434 5.0e-14 80.5 55 81.8
Thhalv10013106m.g Eutrema salsugineum HOM05D001465 ORTHO05D001434 3.3e-13 77.8 55 81.8
Carub.0008s1353 Capsella rubella HOM05D001465 ORTHO05D001434 4.3e-13 77.4 55 80.0
BcaC01g06237 Brassica carinata HOM05D001465 ORTHO05D001434 5.6e-13 77.0 56 82.1
C03p17800 Brassica napus HOM05D001465 ORTHO05D001434 5.6e-13 77.0 56 82.1
BolC3t14187H Brassica oleracea HOM05D001465 ORTHO05D001434 5.6e-13 77.0 56 82.1
Sp6g15500 Schrenkiella parvula HOM05D001465 ORTHO05D001434 5.6e-13 77.0 55 81.8
BcaB08g35698 Brassica carinata HOM05D001465 ORTHO05D001434 7.3e-13 76.6 56 82.1
Aa31LG3G9510 Aethionema arabicum HOM05D001465 ORTHO05D001434 3.6e-12 74.3 56 76.8
A10p10860 Brassica napus HOM05D001465 ORTHO05D001434 6.2e-12 73.6 56 80.4
BolC9t57193H Brassica oleracea HOM05D001465 ORTHO05D001434 6.2e-12 73.6 56 80.4
BraA10t43171Z Brassica rapa HOM05D001465 ORTHO05D001434 6.2e-12 73.6 56 80.4
BcaC04g20463 Brassica carinata HOM05D001465 ORTHO05D001434 1.4e-11 72.4 56 78.6
C09p43200 Brassica napus HOM05D001465 ORTHO05D001434 3.1e-11 71.2 56 78.6
BolC2t07984H Brassica oleracea HOM05D001465 ORTHO05D001434 3.1e-11 71.2 47 89.4
BcaNung06631 Brassica carinata HOM05D001465 ORTHO05D001434 5.2e-11 70.5 55 76.4
CARHR266480 Cardamine hirsuta HOM05D001465 ORTHO05D001434 5.2e-11 70.5 55 76.4
C03p17710 Brassica napus HOM05D001465 ORTHO05D001434 3.4e-10 67.8 61 72.1
BolC3t14181H Brassica oleracea HOM05D001465 ORTHO05D001434 3.4e-10 67.8 61 72.1
A03p15180 Brassica napus HOM05D001465 ORTHO05D001434 5.8e-10 67.0 56 76.8
BraA03t10812Z Brassica rapa HOM05D001465 ORTHO05D001434 5.8e-10 67.0 56 76.8
THA.LOC104799975 Tarenaya hassleriana HOM05D001465 ORTHO05D001434 1.7e-09 65.5 56 66.1
BcaC01g06247 Brassica carinata HOM05D001465 ORTHO05D001434 3.7e-09 64.3 56 75.0
COL.COLO4_16764 Corchorus olitorius HOM05D001465 ORTHO05D001434 9.2e-08 59.7 52 69.2
Thecc.03G199000 Theobroma cacao HOM05D001465 ORTHO05D001434 9.2e-08 59.7 52 69.2
Duzib205G0949 Durio zibethinus HOM05D001465 ORTHO05D001434 2.1e-07 58.5 52 69.2
MD07G1288500 Malus domestica HOM05D001465 ORTHO05D001434 3.0e-06 54.7 52 61.5
Cc02_g01550 Coffea canephora HOM05D001465 ORTHO05D001434 3.9e-06 54.3 49 63.3
Gohir.A09G184600 Gossypium hirsutum HOM05D001465 ORTHO05D001434 5.1e-06 53.9 49 67.3
MD01G1218600 Malus domestica HOM05D001465 ORTHO05D001434 5.1e-06 53.9 52 59.6
Migut.F00212 Erythranthe guttata HOM05D001465 ORTHO05D001434 6.6e-06 53.5 49 61.2
Prupe.2G310000 Prunus persica HOM05D001465 ORTHO05D001434 6.6e-06 53.5 53 62.3
PGR142G0151 Punica granatum HOM05D001465 ORTHO05D001434 6.6e-06 53.5 54 57.4


User provided reference genes

Program Settings