Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p10710 Brassica napus HOM05D005295 ORTHO05D005962 2.0e-101 372.5 194 100.0
BraA02t06134Z Brassica rapa HOM05D005295 ORTHO05D005962 3.8e-100 368.2 194 99.0
C02p17850 Brassica napus HOM05D005295 ORTHO05D005962 1.2e-90 336.7 226 81.9
BolC2t07912H Brassica oleracea HOM05D005295 ORTHO05D005962 3.6e-90 335.1 231 80.1
BcaC03g14369 Brassica carinata HOM05D005295 ORTHO05D005962 1.8e-89 332.8 231 79.7
BcaC03g14372 Brassica carinata HOM05D005295 ORTHO05D005962 1.1e-86 323.6 228 79.4
BolC2t07916H Brassica oleracea HOM05D005295 ORTHO05D005962 1.1e-86 323.6 228 79.4
C02p17830 Brassica napus HOM05D005295 ORTHO05D005962 3.1e-86 322.0 183 92.3
BcaB05g22086 Brassica carinata HOM05D005295 ORTHO05D005962 7.0e-70 267.7 188 77.7
Thhalv10015755m.g Eutrema salsugineum HOM05D005295 ORTHO05D005962 2.7e-58 229.2 192 66.1
Carub.0007s1331 Capsella rubella HOM05D005295 ORTHO05D005962 2.7e-53 212.6 167 65.3
Thhalv10026112m.g Eutrema salsugineum HOM05D005295 ORTHO05D005962 3.5e-53 212.2 167 63.5
C01p23710 Brassica napus HOM05D005295 ORTHO05D005962 1.0e-52 210.7 167 63.5
BcaNung06688 Brassica carinata HOM05D005295 ORTHO05D005962 1.3e-52 210.3 167 63.5
AL7G25230 Arabidopsis lyrata HOM05D005295 ORTHO05D005962 2.3e-52 209.5 165 64.8
BcaNung06687 Brassica carinata HOM05D005295 ORTHO05D005962 3.8e-52 208.8 167 62.9
A01p18770 Brassica napus HOM05D005295 ORTHO05D005962 5.0e-52 208.4 167 62.3
Sp7g25480 Schrenkiella parvula HOM05D005295 ORTHO05D005962 8.6e-52 207.6 167 61.7
BolC1t02323H Brassica oleracea HOM05D005295 ORTHO05D005962 1.1e-51 207.2 167 62.3
AT4G27540 Arabidopsis thaliana HOM05D005295 ORTHO05D005962 1.5e-51 206.8 165 63.6
BraA01t01821Z Brassica rapa HOM05D005295 ORTHO05D005962 1.9e-51 206.5 160 63.8
CARHR235220 Cardamine hirsuta HOM05D005295 ORTHO05D005962 5.6e-51 204.9 164 62.2
Aa31LG5G9970 Aethionema arabicum HOM05D005295 ORTHO05D005962 2.1e-50 203.0 167 61.1
THA.LOC104811877 Tarenaya hassleriana HOM05D005295 ORTHO05D005962 2.3e-49 199.5 167 61.1
Ca_03531_v3 Cicer arietinum L. HOM05D005295 ORTHO05D005962 2.4e-46 189.5 170 56.5
Oeu019302.2 Olea europaea HOM05D005295 ORTHO05D005962 2.0e-45 186.4 167 53.3
Ciclev10009383m.g Citrus clementina HOM05D005295 ORTHO05D005962 1.7e-44 183.3 162 56.8
Medtr2g078650 Medicago truncatula HOM05D005295 ORTHO05D005962 3.0e-44 182.6 193 49.7
Potri.001G396900 Populus trichocarpa HOM05D005295 ORTHO05D005962 3.0e-44 182.6 164 53.7
Ciclev10009380m.g Citrus clementina HOM05D005295 ORTHO05D005962 3.9e-44 182.2 162 56.2
Manes.03G106500 Manihot esculenta HOM05D005295 ORTHO05D005962 2.5e-43 179.5 160 55.0
CSS0001236 Camellia sinensis var. sinensis HOM05D005295 ORTHO05D005962 1.2e-42 177.2 162 54.9
Sabra16G0260000 Salix brachista HOM05D005295 ORTHO05D005962 1.2e-42 177.2 164 54.9
Potri.011G116200 Populus trichocarpa HOM05D005295 ORTHO05D005962 2.1e-42 176.4 155 55.5
TWI39G0015 Tripterygium wilfordii HOM05D005295 ORTHO05D005962 2.1e-42 176.4 169 51.5
Cc05_g11790 Coffea canephora HOM05D005295 ORTHO05D005962 2.8e-42 176.0 161 52.2
Lj3g0021836 Lotus japonicus HOM05D005295 ORTHO05D005962 3.6e-42 175.6 181 51.9
Phvul.005G075000 Phaseolus vulgaris HOM05D005295 ORTHO05D005962 3.6e-42 175.6 176 52.3
Psat0s1402g0040 Pisum sativum HOM05D005295 ORTHO05D005962 3.6e-42 175.6 190 47.9
CANSAT56G1083 Cannabis sativa HOM05D005295 ORTHO05D005962 4.7e-42 175.3 190 49.5
VMungo1080G0752 Vigna mungo HOM05D005295 ORTHO05D005962 4.7e-42 175.3 161 55.3
MD03G1231400 Malus domestica HOM05D005295 ORTHO05D005962 8.0e-42 174.5 167 53.9
Sabra11G0101800 Salix brachista HOM05D005295 ORTHO05D005962 1.4e-41 173.7 158 53.2
arahy.Tifrunner.gnm1.ann1.B1NQ7W Arachis hypogaea HOM05D005295 ORTHO05D005962 2.3e-41 172.9 161 53.4
Cpa.g.sc622.2 Carica papaya HOM05D005295 ORTHO05D005962 2.3e-41 172.9 167 51.5
Prupe.4G176600 Prunus persica HOM05D005295 ORTHO05D005962 2.3e-41 172.9 165 52.7
Glyma.13G273800 Glycine max HOM05D005295 ORTHO05D005962 3.1e-41 172.6 162 54.9
Eucgr.F01159 Eucalyptus grandis HOM05D005295 ORTHO05D005962 4.0e-41 172.2 159 54.1
TWI38G0013 Tripterygium wilfordii HOM05D005295 ORTHO05D005962 4.0e-41 172.2 167 50.9
Hma1.2p1_0387F.1_g141920 Hydrangea macrophylla HOM05D005295 ORTHO05D005962 5.2e-41 171.8 160 53.1
Lalb_Chr20g0109501 Lupinus albus HOM05D005295 ORTHO05D005962 5.2e-41 171.8 167 51.5
PGR083G0729 Punica granatum HOM05D005295 ORTHO05D005962 6.8e-41 171.4 162 54.9
Haze_09452 Corylus avellana HOM05D005295 ORTHO05D005962 8.9e-41 171.0 166 52.4
arahy.Tifrunner.gnm1.ann1.3CLR9I Arachis hypogaea HOM05D005295 ORTHO05D005962 1.2e-40 170.6 161 52.2
Thecc.07G095500 Theobroma cacao HOM05D005295 ORTHO05D005962 1.2e-40 170.6 161 53.4
GSVIVG01014296001 Vitis vinifera HOM05D005295 ORTHO05D005962 1.5e-40 170.2 161 52.8
CsaV3_4G033520 Cucumis sativus L. HOM05D005295 ORTHO05D005962 2.6e-40 169.5 192 47.4
Migut.M00784 Erythranthe guttata HOM05D005295 ORTHO05D005962 2.6e-40 169.5 153 54.9
SGA_v2.0_scaffold34G13800 Striga asiatica HOM05D005295 ORTHO05D005962 2.6e-40 169.5 162 55.6
Ah.06g184530 Amaranthus hybridus HOM05D005295 ORTHO05D005962 4.4e-40 168.7 169 53.3
Sopen12g005670 Solanum pennellii HOM05D005295 ORTHO05D005962 5.8e-40 168.3 164 51.2
Cfa020562 Carpinus fangiana HOM05D005295 ORTHO05D005962 9.8e-40 167.5 162 53.1
Solyc12g013910.2 Solanum lycopersicum HOM05D005295 ORTHO05D005962 9.8e-40 167.5 164 51.2
MELO3C025603.2 Cucumis melo HOM05D005295 ORTHO05D005962 1.3e-39 167.2 192 46.9
ECA234G3281 Erigeron canadensis HOM05D005295 ORTHO05D005962 1.7e-39 166.8 157 54.8
ClCG11G017890 Citrullus lanatus HOM05D005295 ORTHO05D005962 2.2e-39 166.4 159 50.9
COL.COLO4_36711 Corchorus olitorius HOM05D005295 ORTHO05D005962 2.2e-39 166.4 161 53.4
Sed0001385 Sechium edule HOM05D005295 ORTHO05D005962 2.2e-39 166.4 167 48.5
Actinidia12794 Actinidia chinensis HOM05D005295 ORTHO05D005962 2.9e-39 166.0 184 49.5
PGSC0003DMG400015366 Solanum tuberosum HOM05D005295 ORTHO05D005962 2.9e-39 166.0 162 51.2
Aqoxy1G02337 Aquilegia oxysepala HOM05D005295 ORTHO05D005962 4.9e-39 165.2 158 53.2
Lj8A154T78 Lonicera japonica HOM05D005295 ORTHO05D005962 4.9e-39 165.2 176 50.6
Duzib213G0204 Durio zibethinus HOM05D005295 ORTHO05D005962 1.1e-38 164.1 160 52.5
EL10Ac4g08225 Beta vulgaris HOM05D005295 ORTHO05D005962 1.4e-38 163.7 169 51.5
SalBow8G4458 Salvia bowleyana HOM05D005295 ORTHO05D005962 2.4e-38 162.9 191 47.1
PSO675G2991 Papaver somniferum HOM05D005295 ORTHO05D005962 3.2e-38 162.5 162 48.8
Gorai.009G376000 Gossypium raimondii HOM05D005295 ORTHO05D005962 7.0e-38 161.4 158 51.3
Lsat_1_v5_gn_5_128440 Lactuca sativa HOM05D005295 ORTHO05D005962 7.0e-38 161.4 158 51.3
CiPaw.11G171800 Carya illinoinensis HOM05D005295 ORTHO05D005962 9.2e-38 161.0 217 44.2
Hund22882 Selenicereus undatus HOM05D005295 ORTHO05D005962 9.2e-38 161.0 169 51.5
SGA_v2.0_scaffold73G24237 Striga asiatica HOM05D005295 ORTHO05D005962 1.6e-37 160.2 160 50.6
AUR62036172 Chenopodium quinoa HOM05D005295 ORTHO05D005962 2.0e-37 159.8 161 53.4
Gohir.A04G035200 Gossypium hirsutum HOM05D005295 ORTHO05D005962 3.5e-37 159.1 158 50.0
Rhsim06G0201600 Rhododendron simsii HOM05D005295 ORTHO05D005962 3.5e-37 159.1 174 48.9
CAN.G213.18 Capsicum annuum HOM05D005295 ORTHO05D005962 6.0e-37 158.3 159 49.7
HanXRQChr12g0361161 Helianthus annuus HOM05D005295 ORTHO05D005962 1.7e-36 156.8 153 51.6
Nn1g04175 Nelumbo nucifera HOM05D005295 ORTHO05D005962 3.0e-36 156.0 152 51.3
Peaxi162Scf00000g00314 Petunia axillaris HOM05D005295 ORTHO05D005962 1.9e-35 153.3 159 49.1
TPR.G7946 Trifolium pratense HOM05D005295 ORTHO05D005962 1.9e-35 153.3 145 51.7
MBI02_g22345_MAGBIO Magnolia biondii HOM05D005295 ORTHO05D005962 7.3e-35 151.4 160 46.9
AUR62019458 Chenopodium quinoa HOM05D005295 ORTHO05D005962 6.2e-34 148.3 142 57.7
Sc16g0007150 Simmondsia chinensis HOM05D005295 ORTHO05D005962 2.3e-33 146.4 150 50.7
unitig_0.g1149 Utricularia gibba HOM05D005295 ORTHO05D005962 2.3e-33 146.4 174 45.4
FAN25G2205 Fragaria x ananassa HOM05D005295 ORTHO05D005962 7.5e-32 141.4 168 43.5
FAN21G0215 Fragaria x ananassa HOM05D005295 ORTHO05D005962 9.8e-32 141.0 168 42.9
FvH4_3g19520 Fragaria vesca HOM05D005295 ORTHO05D005962 1.3e-31 140.6 168 42.9
CDE05G3097 Ceratophyllum demersum HOM05D006331 ORTHO05D008043 6.4e-31 138.3 151 50.3
CDE05G1939 Ceratophyllum demersum HOM05D005295 ORTHO05D005962 1.4e-30 137.1 189 41.8
RcHm_v2.0_Chr5g0032761 Rosa chinensis HOM05D005295 ORTHO05D005962 2.4e-30 136.3 168 42.3
Gohir.D05G348200 Gossypium hirsutum HOM05D005295 ORTHO05D005962 4.1e-30 135.6 130 51.5
Atru.chr2.2424 Acer truncatum HOM05D005295 ORTHO05D005962 9.2e-30 134.4 179 44.1
Nitab4.5_0000332g0010 Nicotiana tabacum HOM05D005295 ORTHO05D005962 2.1e-29 133.3 147 47.6
MSTRG.6822 Avicennia marina HOM05D005295 ORTHO05D005962 6.0e-29 131.7 111 56.8
QL08p022700 Quercus lobata HOM05D005295 ORTHO05D005962 3.0e-28 129.4 281 30.6
HPP92_003730 Vanilla planifolia HOM05D005295 ORTHO05D005962 3.9e-28 129.0 155 43.9
FAN11G0135 Fragaria x ananassa HOM05D005295 ORTHO05D005962 1.1e-27 127.5 168 41.1
DCAR_013119 Daucus carota HOM05D005295 ORTHO05D005962 5.8e-24 115.2 119 46.2
Zm00001eb231100 Zea mays HOM05D005295 ORTHO05D005962 1.7e-23 113.6 154 42.2
ATR0150G019 Amborella trichopoda HOM05D005295 ORTHO05D005962 2.9e-23 112.8 214 33.2
BcaNung07036 Brassica carinata HOM05D005295 ORTHO05D005962 1.7e-20 103.6 85 57.6
SEGI_06803 Sequoiadendron giganteum HOM05D005295 ORTHO05D005962 3.0e-20 102.8 204 30.4
BcaB05g22090 Brassica carinata HOM05D005295 ORTHO05D005962 2.8e-18 96.3 70 72.9
Eucgr.F01198 Eucalyptus grandis HOM05D005295 ORTHO05D005962 1.2e-16 90.9 75 62.7
SMO285G0011 Selaginella moellendorffii HOM05D005295 ORTHO05D005962 1.5e-16 90.5 159 30.8
BcaB06g26783 Brassica carinata HOM05D005295 ORTHO05D005962 9.9e-16 87.8 73 65.8
BcaB05g22088 Brassica carinata HOM05D005295 ORTHO05D005962 3.8e-15 85.9 72 66.7
Ciclev10010240m.g Citrus clementina HOM05D005295 ORTHO05D005962 3.8e-15 85.9 162 38.9
vmacro11885 Vaccinium macrocarpon HOM05D005295 ORTHO05D005962 1.1e-14 84.3 81 46.9
Carub.0003s1487 Capsella rubella HOM05D005295 ORTHO05D005962 3.3e-11 72.8 186 29.0
Pp3c9_10810 Physcomitrium patens HOM05D005295 ORTHO05D005962 7.3e-11 71.6 150 29.3
Dinv12314 Davidia involucrata HOM05D005295 ORTHO05D005962 9.6e-11 71.2 86 44.2
Os09g0134400 Oryza sativa ssp. japonica HOM05D005295 ORTHO05D005962 1.3e-10 70.9 175 31.4
Mapoly0124s0020 Marchantia polymorpha HOM05D005295 ORTHO05D005962 2.1e-10 70.1 205 28.8
BcaB04g20941 Brassica carinata HOM05D001464 ORTHO05D005962 4.0e-09 65.9 157 29.3
AL3G27610 Arabidopsis lyrata HOM05D005295 ORTHO05D005962 6.9e-09 65.1 121 31.4
Dinv14935 Davidia involucrata HOM05D005295 ORTHO05D005962 6.9e-09 65.1 56 57.1
A01p38800 Brassica napus HOM05D005295 ORTHO05D005962 1.5e-08 63.9 134 31.3
BraA01t03927Z Brassica rapa HOM05D005295 ORTHO05D005962 1.5e-08 63.9 134 31.3
BcaC09g48479 Brassica carinata HOM05D005295 ORTHO05D005962 3.4e-08 62.8 134 31.3
BolC1t04893H Brassica oleracea HOM05D005295 ORTHO05D005962 3.4e-08 62.8 134 31.3
C01p49340 Brassica napus HOM05D005295 ORTHO05D005962 2.9e-07 59.7 134 29.9
Hma1.2p1_0387F.1_g141930 Hydrangea macrophylla HOM05D005295 ORTHO05D005962 2.9e-07 59.7 70 37.1
THA.LOC104818140 Tarenaya hassleriana HOM05D005295 ORTHO05D005962 3.8e-07 59.3 92 43.5
Lj1C840T8 Lonicera japonica HOM05D005295 ORTHO05D005962 3.2e-06 56.2 88 40.9


User provided reference genes

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