Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 1.3e-281 972.2 453 100.0
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 1.3e-281 972.2 453 100.0
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 7.6e-277 956.4 452 98.2
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 6.4e-276 953.4 452 98.0
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 1.4e-275 952.2 452 97.8
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 3.2e-275 951.0 452 97.1
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 4.2e-267 924.1 452 94.2
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 2.8e-263 911.4 450 92.9
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 6.3e-263 910.2 450 92.9
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 1.4e-262 909.1 450 93.3
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 1.8e-262 908.7 446 92.8
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 5.3e-262 907.1 450 92.4
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 3.0e-249 864.8 444 88.1
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 3.5e-237 824.7 433 85.7
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 4.7e-234 814.3 447 83.2
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 6.1e-234 813.9 443 81.5
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 1.0e-233 813.1 445 82.9
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 3.0e-233 811.6 443 81.5
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 6.7e-233 810.4 443 81.0
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 1.2e-232 809.7 450 81.3
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 2.0e-232 808.9 441 83.2
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 7.5e-232 807.0 440 83.0
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 9.7e-232 806.6 445 82.0
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 2.2e-231 805.4 432 84.5
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 2.8e-231 805.1 446 82.1
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 4.8e-231 804.3 439 82.2
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 4.8e-231 804.3 445 81.6
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 4.8e-231 804.3 445 82.0
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 8.2e-231 803.5 440 82.5
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 1.4e-230 802.7 445 81.6
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.4e-230 802.0 441 81.9
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 3.1e-230 801.6 437 82.6
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 5.3e-230 800.8 441 82.1
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 7.0e-230 800.4 441 81.4
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 1.2e-229 799.7 438 81.5
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 1.2e-229 799.7 436 83.3
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 1.2e-229 799.7 462 79.0
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 2.7e-229 798.5 439 81.8
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 4.5e-229 797.7 441 82.1
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 5.9e-229 797.3 437 82.8
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 7.7e-229 797.0 433 82.7
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 1.0e-228 796.6 433 82.2
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 1.7e-228 795.8 446 81.2
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 2.9e-228 795.0 433 82.2
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 2.9e-228 795.0 434 81.6
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 3.8e-228 794.7 432 82.6
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 6.5e-228 793.9 464 78.9
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 1.5e-227 792.7 446 80.5
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 1.9e-227 792.3 433 82.9
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 4.2e-227 791.2 434 82.5
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 7.2e-227 790.4 431 82.8
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 9.4e-227 790.0 438 81.5
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 1.2e-226 789.6 445 80.2
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 2.7e-226 788.5 434 81.8
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 2.7e-226 788.5 442 80.5
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 4.7e-226 787.7 433 82.9
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 6.1e-226 787.3 438 81.3
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 1.0e-225 786.6 446 78.9
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 1.0e-225 786.6 431 81.9
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 3.0e-225 785.0 452 82.7
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 4.0e-225 784.6 437 80.8
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 5.2e-225 784.3 432 82.2
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 1.2e-224 783.1 431 81.4
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 1.7e-223 779.2 432 81.7
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 1.7e-223 779.2 454 78.2
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 2.2e-223 778.9 438 80.4
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 2.8e-223 778.5 471 75.4
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 4.8e-223 777.7 432 80.8
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.8e-222 775.8 470 76.0
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 3.1e-222 775.0 445 79.1
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 5.4e-222 774.2 434 79.7
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 2.7e-221 771.9 432 81.2
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 3.5e-221 771.5 443 79.5
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 3.5e-221 771.5 443 79.5
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 3.5e-221 771.5 432 80.3
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 1.7e-220 769.2 433 79.4
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 5.0e-220 767.7 429 81.6
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 8.6e-220 766.9 436 80.7
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 1.5e-219 766.1 433 79.4
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 3.6e-218 761.5 469 74.2
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 3.6e-218 761.5 469 74.2
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 1.2e-216 756.5 440 78.9
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 1.2e-216 756.5 432 79.4
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 1.7e-215 752.7 468 74.4
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 3.7e-215 751.5 441 77.8
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 2.0e-213 745.7 433 79.7
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 2.0e-213 745.7 438 75.6
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 8.0e-210 733.8 439 76.1
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 1.4e-209 733.0 456 75.4
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 9.8e-208 726.9 384 85.9
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 1.4e-206 723.0 468 72.9
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 3.5e-205 718.4 433 76.4
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 1.9e-203 712.6 378 84.7
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 3.6e-202 708.4 432 74.3
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 1.3e-196 689.9 397 79.1
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 1.8e-193 679.5 438 70.3
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 4.6e-189 664.8 424 70.0
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 9.5e-187 657.1 448 67.6
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 2.4e-182 642.5 445 69.7
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 1.9e-174 616.3 415 69.6
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 1.5e-171 606.7 433 64.4
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 1.5e-163 580.1 325 79.7
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 1.1e-161 573.9 311 83.3
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 1.7e-159 566.6 447 61.5
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 5.1e-156 555.1 304 81.9
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 1.2e-152 543.9 459 59.0
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 5.8e-152 541.6 376 69.1
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 1.9e-147 526.6 280 83.9
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 1.7e-127 460.3 270 77.8
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 3.1e-92 343.2 427 50.4
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 5.1e-79 299.3 196 73.0
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 4.7e-77 292.7 302 56.3
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 1.6e-72 277.7 159 79.2
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 4.7e-69 266.2 132 89.4
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 4.4e-67 259.6 164 70.1
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 1.5e-62 244.6 230 55.2
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 2.8e-61 240.4 133 82.0
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 3.6e-61 240.0 133 81.2
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 3.8e-58 229.9 132 78.0
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 4.2e-57 226.5 120 85.8
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 3.2e-49 200.3 249 49.8
TWI38G1497 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 1.1e-46 191.8 119 73.9
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 7.4e-46 189.1 114 70.2
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 2.6e-35 154.1 182 50.5
SEGI_25954 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 2.2e-29 134.4 84 71.4
FAN25G2983 Fragaria x ananassa HOM05D006017 ORTHO05D007821 3.6e-24 117.1 95 56.8
arahy.Tifrunner.gnm1.ann1.EZ2Q4B Arachis hypogaea HOM05D006004 ORTHO05D006976 2.2e-21 107.8 61 77.0
SEGI_23248 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 1.4e-20 105.1 68 67.6
TWI38G0821 Tripterygium wilfordii HOM05D006017 ORTHO05D413584 2.4e-20 104.4 55 78.2
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 3.8e-18 97.1 103 47.6
BraA10t43231Z Brassica rapa HOM05D006017 ORTHO05D017343 1.6e-16 91.7 68 63.2
HPP92_003866 Vanilla planifolia HOM05D006017 ORTHO05D007821 4.2e-09 67.0 54 61.1
Mapoly0432s0001 Marchantia polymorpha HOM05D019566 ORTHO05D017343 4.7e-08 63.5 43 65.1


User provided reference genes

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