Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p10030 Brassica napus HOM05D010845 ORTHO05D002692 6.4e-91 337.4 172 100.0
BraA02t06071Z Brassica rapa HOM05D010845 ORTHO05D002692 2.7e-89 332.0 172 97.1
BolC2t07773H Brassica oleracea HOM05D010845 ORTHO05D002692 3.9e-80 301.6 174 89.7
BcaC03g14288 Brassica carinata HOM05D010845 ORTHO05D002692 1.2e-78 296.6 171 88.9
BcaB05g22158 Brassica carinata HOM05D010845 ORTHO05D002692 6.2e-78 294.3 172 87.2
BcaB08g35844 Brassica carinata HOM05D010845 ORTHO05D002692 3.5e-65 251.9 173 78.0
Sp6g16730 Schrenkiella parvula HOM05D010845 ORTHO05D002692 8.6e-64 247.3 173 76.9
C02p16670 Brassica napus HOM05D010845 ORTHO05D002692 2.8e-62 242.3 140 88.6
AL8G30220 Arabidopsis lyrata HOM05D010845 ORTHO05D002692 1.8e-61 239.6 173 75.1
AT5G54790 Arabidopsis thaliana HOM05D010845 ORTHO05D002692 1.7e-59 233.0 173 74.0
A10p12040 Brassica napus HOM05D010845 ORTHO05D002692 1.7e-59 233.0 174 74.1
Thhalv10015916m.g Eutrema salsugineum HOM05D010845 ORTHO05D002692 1.9e-58 229.6 172 72.1
Carub.0008s1506 Capsella rubella HOM05D010845 ORTHO05D002692 1.0e-56 223.8 174 72.4
CARHR268130 Cardamine hirsuta HOM05D010845 ORTHO05D002692 1.5e-52 209.9 176 70.5
BolC9t57396H Brassica oleracea HOM05D010845 ORTHO05D002692 1.9e-47 193.0 143 75.5
C09p45220 Brassica napus HOM05D010845 ORTHO05D002692 8.1e-46 187.6 140 74.3
BraA10t43305Z Brassica rapa HOM05D010845 ORTHO05D002692 1.1e-45 187.2 170 62.4
Aa31LG3G10720 Aethionema arabicum HOM05D010845 ORTHO05D002692 1.7e-19 100.1 173 43.4
THA.LOC104813418 Tarenaya hassleriana HOM05D010845 ORTHO05D002692 7.9e-17 91.3 187 38.5
Duzib213G0532 Durio zibethinus HOM05D002846 ORTHO05D002692 7.4e-15 84.7 193 35.2
Dinv39698 Davidia involucrata HOM05D002846 ORTHO05D002692 1.2e-12 77.4 200 36.0
Gohir.D01G063800 Gossypium hirsutum HOM05D002846 ORTHO05D002692 1.2e-12 77.4 182 34.1
TAR627G0783 Trochodendron aralioides HOM05D002846 ORTHO05D002692 2.0e-12 76.6 189 36.5
Gohir.A01G076300 Gossypium hirsutum HOM05D002846 ORTHO05D002692 3.4e-12 75.9 186 34.9
TPR.G19979 Trifolium pratense HOM05D002846 ORTHO05D002692 5.9e-12 75.1 181 37.0
Gorai.002G084300 Gossypium raimondii HOM05D002846 ORTHO05D002692 7.7e-12 74.7 186 34.9
Actinidia27214 Actinidia chinensis HOM05D002846 ORTHO05D002692 1.7e-11 73.6 161 37.3
Medtr2g083300 Medicago truncatula HOM05D002846 ORTHO05D002692 1.7e-11 73.6 161 39.8
Hma1.2p1_0948F.1_g240490 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 5.0e-11 72.0 173 36.4
Psat5g251520 Pisum sativum HOM05D002846 ORTHO05D002692 6.5e-11 71.6 156 36.5
Peaxi162Scf00007g01016 Petunia axillaris HOM05D002846 ORTHO05D002692 8.5e-11 71.2 197 34.5
FAN25G2313 Fragaria x ananassa HOM05D002846 ORTHO05D002692 1.4e-10 70.5 199 35.7
TWI38G2122 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 1.4e-10 70.5 199 37.2
Thecc.07G046400 Theobroma cacao HOM05D002846 ORTHO05D002692 4.2e-10 68.9 194 36.1
TWI36G0639 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 4.2e-10 68.9 191 36.1
Potri.001G419400 Populus trichocarpa HOM05D002846 ORTHO05D002692 5.5e-10 68.6 204 32.8
CsaV3_3G023230 Cucumis sativus L. HOM05D002846 ORTHO05D002692 7.2e-10 68.2 186 32.8
Potri.014G151900 Populus trichocarpa HOM05D002846 ORTHO05D002692 7.2e-10 68.2 192 35.9
Sp1g37670 Schrenkiella parvula HOM05D010922 ORTHO05D011067 7.2e-10 68.2 200 32.0
Sabra11G0121900 Salix brachista HOM05D002846 ORTHO05D002692 9.4e-10 67.8 198 33.8
Peaxi162Scf00932g00218 Petunia axillaris HOM05D002846 ORTHO05D002692 1.6e-09 67.0 192 32.8
QL08p012603 Quercus lobata HOM05D002846 ORTHO05D002692 1.6e-09 67.0 186 34.4
CSS0004659 Camellia sinensis var. sinensis HOM05D002846 ORTHO05D002692 2.1e-09 66.6 202 30.2
Lalb_Chr01g0005591 Lupinus albus HOM05D002846 ORTHO05D002692 2.1e-09 66.6 150 38.0
Manes.13G071601 Manihot esculenta HOM05D002846 ORTHO05D002692 2.1e-09 66.6 197 33.0
A06p02810 Brassica napus HOM05D010922 ORTHO05D011067 2.7e-09 66.2 181 31.5
Peaxi162Scf00462g00005 Petunia axillaris HOM05D002846 ORTHO05D002692 3.6e-09 65.9 192 32.8
MELO3C018090.2 Cucumis melo HOM05D002846 ORTHO05D002692 4.7e-09 65.5 170 33.5
Thecc.02G312900 Theobroma cacao HOM05D002846 ORTHO05D002692 4.7e-09 65.5 182 33.0
TWI38G1873 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 4.7e-09 65.5 194 34.5
GSVIVG01030606001 Vitis vinifera HOM05D002846 ORTHO05D002692 4.7e-09 65.5 199 36.2
Cfa020399 Carpinus fangiana HOM05D002846 ORTHO05D002692 6.1e-09 65.1 191 33.0
Sabra14G0115500 Salix brachista HOM05D002846 ORTHO05D002692 6.1e-09 65.1 193 34.7
ATR0697G184 Amborella trichopoda HOM05D002846 ORTHO05D002692 8.0e-09 64.7 164 39.0
Aqoxy4G01970 Aquilegia oxysepala HOM05D002846 ORTHO05D002692 8.0e-09 64.7 170 35.9
AT1G50930 Arabidopsis thaliana HOM05D010922 ORTHO05D011067 8.0e-09 64.7 201 29.4
Potri.011G135700 Populus trichocarpa HOM05D002846 ORTHO05D002692 8.0e-09 64.7 204 32.8
QL08p033485 Quercus lobata HOM05D002846 ORTHO05D002692 8.0e-09 64.7 177 32.8
PGSC0003DMG400005270 Solanum tuberosum HOM05D002846 ORTHO05D002692 8.0e-09 64.7 186 33.3
BcaB07g33533 Brassica carinata HOM05D010922 ORTHO05D011067 1.0e-08 64.3 186 31.2
BraA06t23488Z Brassica rapa HOM05D010922 ORTHO05D011067 1.0e-08 64.3 183 32.2
ClCG05G014610 Citrullus lanatus HOM05D002846 ORTHO05D002692 1.0e-08 64.3 185 33.5
Gohir.A12G156600 Gossypium hirsutum HOM05D002846 ORTHO05D002692 1.0e-08 64.3 183 31.1
Sabra16G0285000 Salix brachista HOM05D002846 ORTHO05D002692 1.0e-08 64.3 205 32.2
Cc05_g13390 Coffea canephora HOM05D002846 ORTHO05D002692 1.4e-08 63.9 193 31.6
Lalb_Chr14g0367581 Lupinus albus HOM05D002846 ORTHO05D002692 1.4e-08 63.9 179 30.2
Medtr2g088590 Medicago truncatula HOM05D002846 ORTHO05D002692 1.4e-08 63.9 162 34.6
Sabra02G0175700 Salix brachista HOM05D002846 ORTHO05D002692 1.4e-08 63.9 200 33.5
Lalb_Chr19g0135751 Lupinus albus HOM05D002846 ORTHO05D002692 1.8e-08 63.5 149 36.9
C06p06090 Brassica napus HOM05D010922 ORTHO05D011067 3.0e-08 62.8 181 31.5
BolC6t35722H Brassica oleracea HOM05D010922 ORTHO05D011067 3.0e-08 62.8 181 31.5
AUR62037135 Chenopodium quinoa HOM05D002846 ORTHO05D002692 3.0e-08 62.8 166 38.0
FAN14G0905 Fragaria x ananassa HOM05D002846 ORTHO05D002692 3.0e-08 62.8 168 34.5
Nitab4.5_0003509g0040 Nicotiana tabacum HOM05D002846 ORTHO05D002692 3.0e-08 62.8 185 31.9
Psat5g264560 Pisum sativum HOM05D002846 ORTHO05D002692 3.0e-08 62.8 180 36.1
Ciclev10018295m.g Citrus clementina HOM05D002846 ORTHO05D002692 3.9e-08 62.4 175 34.3
Gohir.A13G140400 Gossypium hirsutum HOM05D002846 ORTHO05D002692 3.9e-08 62.4 165 32.7
Gohir.D12G159433 Gossypium hirsutum HOM05D002846 ORTHO05D002692 3.9e-08 62.4 187 31.0
Gorai.008G172600 Gossypium raimondii HOM05D002846 ORTHO05D002692 3.9e-08 62.4 187 31.0
MD09G1107000 Malus domestica HOM05D002846 ORTHO05D002692 3.9e-08 62.4 201 32.3
HanXRQChr05g0159181 Helianthus annuus HOM05D002846 ORTHO05D002692 5.2e-08 62.0 164 31.7
Nitab4.5_0001176g0060 Nicotiana tabacum HOM05D002846 ORTHO05D002692 5.2e-08 62.0 168 33.9
TPR.G4201 Trifolium pratense HOM05D002846 ORTHO05D002692 5.2e-08 62.0 164 35.4
Haze_09635 Corylus avellana HOM05D002846 ORTHO05D002692 6.7e-08 61.6 192 34.9
Lalb_Chr03g0028801 Lupinus albus HOM05D002846 ORTHO05D002692 6.7e-08 61.6 167 34.7
Nn1g07065 Nelumbo nucifera HOM05D002846 ORTHO05D002692 6.7e-08 61.6 188 36.2
GSVIVG01001985001 Vitis vinifera HOM05D002846 ORTHO05D002692 6.7e-08 61.6 194 34.0
Gorai.013G163000 Gossypium raimondii HOM05D002846 ORTHO05D002692 8.8e-08 61.2 165 33.3
Prupe.4G205800 Prunus persica HOM05D002846 ORTHO05D002692 8.8e-08 61.2 179 31.3
TPR.G4595 Trifolium pratense HOM05D002846 ORTHO05D002692 8.8e-08 61.2 163 31.3
Actinidia05119 Actinidia chinensis HOM05D002846 ORTHO05D002692 1.1e-07 60.8 184 35.3
FAN05G4571 Fragaria x ananassa HOM05D002846 ORTHO05D002692 1.1e-07 60.8 162 33.3
TAR624G1330 Trochodendron aralioides HOM05D002846 ORTHO05D002692 1.1e-07 60.8 188 35.1
AL1G58650 Arabidopsis lyrata HOM05D010922 ORTHO05D011067 1.5e-07 60.5 200 29.0
CANSAT64G1541 Cannabis sativa HOM05D002846 ORTHO05D002692 1.5e-07 60.5 219 30.1
Duzib251G0618 Durio zibethinus HOM05D002846 ORTHO05D002692 1.5e-07 60.5 179 31.8
FAN21G2316 Fragaria x ananassa HOM05D002846 ORTHO05D002692 1.5e-07 60.5 199 31.7
Lj3g0014799 Lotus japonicus HOM05D002846 ORTHO05D002692 1.5e-07 60.5 191 33.5
Cc05_g04910 Coffea canephora HOM05D002846 ORTHO05D002692 2.0e-07 60.1 184 32.1
Phvul.005G114400 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 2.6e-07 59.7 177 33.3
Sed0016321 Sechium edule HOM05D002846 ORTHO05D002692 2.6e-07 59.7 160 35.0
Glyma.06G303502 Glycine max HOM05D002846 ORTHO05D002692 4.4e-07 58.9 164 32.9
HanXRQChr15g0496381 Helianthus annuus HOM05D002846 ORTHO05D002692 4.4e-07 58.9 194 28.9
CAN.G1151.1 Capsicum annuum HOM05D002846 ORTHO05D002692 5.7e-07 58.5 216 30.6
Gohir.D13G145200 Gossypium hirsutum HOM05D002846 ORTHO05D002692 5.7e-07 58.5 163 35.0
CARHR040970 Cardamine hirsuta HOM05D010922 ORTHO05D011067 7.4e-07 58.2 202 28.7
FvH4_6g43420 Fragaria vesca HOM05D002846 ORTHO05D002692 7.4e-07 58.2 168 33.3
FAN09G0250 Fragaria x ananassa HOM05D002846 ORTHO05D002692 7.4e-07 58.2 171 32.2
RhsimUnG0010900 Rhododendron simsii HOM05D002846 ORTHO05D002692 7.4e-07 58.2 189 31.7
BcaC05g27377 Brassica carinata HOM05D010922 ORTHO05D011067 9.7e-07 57.8 192 32.3
DCAR_019769 Daucus carota HOM05D002846 ORTHO05D002692 1.3e-06 57.4 163 33.7
Glyma.12G194600 Glycine max HOM05D002846 ORTHO05D002692 1.3e-06 57.4 170 32.4
CiPaw.11G185800 Carya illinoinensis HOM05D002846 ORTHO05D002692 1.7e-06 57.0 198 34.3
Hma1.2p1_1344F.1_g277060 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 1.7e-06 57.0 159 35.8
PGSC0003DMG400025494 Solanum tuberosum HOM05D002846 ORTHO05D002692 1.7e-06 57.0 167 31.1
Glyma.12G100400 Glycine max HOM05D002846 ORTHO05D002692 2.2e-06 56.6 164 32.3
Nitab4.5_0002083g0020 Nicotiana tabacum HOM05D002846 ORTHO05D002692 2.2e-06 56.6 159 34.6
Nitab4.5_0015723g0010 Nicotiana tabacum HOM05D002846 ORTHO05D002692 2.2e-06 56.6 170 32.4
Phvul.011G105200 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 2.2e-06 56.6 172 30.8
RcHm_v2.0_Chr2g0159761 Rosa chinensis HOM05D002846 ORTHO05D002692 2.2e-06 56.6 168 30.4
Atru.chr6.3164 Acer truncatum HOM05D002846 ORTHO05D002692 2.8e-06 56.2 220 31.4
Cfa014424 Carpinus fangiana HOM05D002846 ORTHO05D002692 2.8e-06 56.2 183 31.7
Dinv40727 Davidia involucrata HOM05D002846 ORTHO05D002692 3.7e-06 55.8 187 35.8
FAN02G4078 Fragaria x ananassa HOM05D002846 ORTHO05D002692 3.7e-06 55.8 171 31.6
EL10Ac9g20666 Beta vulgaris HOM05D002846 ORTHO05D002692 4.8e-06 55.5 193 33.2
vmacro12218 Vaccinium macrocarpon HOM05D002846 ORTHO05D002692 4.8e-06 55.5 193 32.1
Thhalv10011976m.g Eutrema salsugineum HOM05D010922 ORTHO05D011067 6.3e-06 55.1 194 27.3
Oeu041933.1 Olea europaea HOM05D002846 ORTHO05D002692 6.3e-06 55.1 167 31.7
BcaB02g11196 Brassica carinata HOM05D010922 ORTHO05D011067 8.2e-06 54.7 193 31.6
BcaB02g11197 Brassica carinata HOM05D010922 ORTHO05D011067 8.2e-06 54.7 193 31.6
Carub.0001s3987 Capsella rubella HOM05D010922 ORTHO05D011067 8.2e-06 54.7 195 30.3
ClCG02G008550 Citrullus lanatus HOM05D002846 ORTHO05D002692 8.2e-06 54.7 155 32.9
ECA246G4222 Erigeron canadensis HOM05D002846 ORTHO05D002692 8.2e-06 54.7 149 30.2
Nitab4.5_0000006g0090 Nicotiana tabacum HOM05D002846 ORTHO05D002692 8.2e-06 54.7 178 29.8


User provided reference genes

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