Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p08680 Brassica napus HOM05D001655 ORTHO05D001567 8.8e-34 146.4 73 100.0
BraA02t05938Z Brassica rapa HOM05D001655 ORTHO05D001567 1.1e-12 76.3 37 100.0
BcaB08g36075 Brassica carinata HOM05D001655 ORTHO05D001567 6.1e-11 70.5 43 81.4
AT5G57170 Arabidopsis thaliana HOM05D001655 ORTHO05D001567 8.0e-11 70.1 43 81.4
BcaC04g19993 Brassica carinata HOM05D001655 ORTHO05D001567 8.0e-11 70.1 43 81.4
A10p14560 Brassica napus HOM05D001655 ORTHO05D001567 8.0e-11 70.1 43 81.4
C09p49000 Brassica napus HOM05D001655 ORTHO05D001567 8.0e-11 70.1 43 81.4
BolC9t57751H Brassica oleracea HOM05D001655 ORTHO05D001567 8.0e-11 70.1 43 81.4
BraA10t43543Z Brassica rapa HOM05D001655 ORTHO05D001567 8.0e-11 70.1 43 81.4
Thhalv10015052m.g Eutrema salsugineum HOM05D001655 ORTHO05D001567 8.0e-11 70.1 43 81.4
Carub.0008s1768 Capsella rubella HOM05D001655 ORTHO05D001567 1.4e-10 69.3 43 79.1
Sp6g18900 Schrenkiella parvula HOM05D001655 ORTHO05D001567 1.8e-10 68.9 43 79.1
CARHR270960 Cardamine hirsuta HOM05D001655 ORTHO05D001567 3.1e-10 68.2 43 81.4
THA.LOC104817772 Tarenaya hassleriana HOM05D001655 ORTHO05D001567 8.9e-10 66.6 43 79.1
CANSAT11G0805 Cannabis sativa HOM05D009499 ORTHO05D001567 1.5e-09 65.9 38 81.6
COL.COLO4_07062 Corchorus olitorius HOM05D001655 ORTHO05D001567 1.5e-09 65.9 40 80.0
Aa31LG3G13070 Aethionema arabicum HOM05D001655 ORTHO05D001567 2.0e-09 65.5 43 76.7
arahy.Tifrunner.gnm1.ann1.85KK33 Arachis hypogaea HOM05D001655 ORTHO05D001567 2.0e-09 65.5 43 76.7
arahy.Tifrunner.gnm1.ann1.RRL2AN Arachis hypogaea HOM05D001655 ORTHO05D001567 2.0e-09 65.5 43 76.7
AL8G33100 Arabidopsis lyrata HOM05D001655 ORTHO05D001567 2.6e-09 65.1 43 74.4
Eucgr.C00111 Eucalyptus grandis HOM05D001655 ORTHO05D001567 2.6e-09 65.1 43 74.4
Glyma.13G100900 Glycine max HOM05D001655 ORTHO05D001567 2.6e-09 65.1 43 74.4
Phvul.003G141000 Phaseolus vulgaris HOM05D001655 ORTHO05D001567 2.6e-09 65.1 43 74.4
CDE05G1277 Ceratophyllum demersum HOM05D001655 ORTHO05D001567 3.4e-09 64.7 43 76.7
CAN.G555.10 Capsicum annuum HOM05D001655 ORTHO05D001567 4.4e-09 64.3 43 74.4
Cc06_g20800 Coffea canephora HOM05D001655 ORTHO05D001567 4.4e-09 64.3 40 77.5
Duzib150G1125 Durio zibethinus HOM05D001655 ORTHO05D001567 4.4e-09 64.3 40 77.5
Gohir.A08G080600 Gossypium hirsutum HOM05D001655 ORTHO05D001567 4.4e-09 64.3 40 77.5
Gohir.D08G090700 Gossypium hirsutum HOM05D001655 ORTHO05D001567 4.4e-09 64.3 40 77.5
Gorai.004G096000 Gossypium raimondii HOM05D001655 ORTHO05D001567 4.4e-09 64.3 40 77.5
Nitab4.5_0000491g0170 Nicotiana tabacum HOM05D001655 ORTHO05D001567 4.4e-09 64.3 43 74.4
Nitab4.5_0007929g0020 Nicotiana tabacum HOM05D001655 ORTHO05D001567 4.4e-09 64.3 43 74.4
Actinidia02498 Actinidia chinensis HOM05D001655 ORTHO05D001567 5.8e-09 63.9 40 77.5
CiPaw.07G197500 Carya illinoinensis HOM05D001655 ORTHO05D001567 5.8e-09 63.9 43 74.4
Dinv41183 Davidia involucrata HOM05D001655 ORTHO05D001567 5.8e-09 63.9 43 74.4
Oeu044669.1 Olea europaea HOM05D001655 ORTHO05D001567 5.8e-09 63.9 43 74.4
RcHm_v2.0_Chr4g0399451 Rosa chinensis HOM05D001655 ORTHO05D001567 5.8e-09 63.9 43 74.4
GSVIVG01029318001 Vitis vinifera HOM05D001655 ORTHO05D001567 5.8e-09 63.9 43 74.4
CANSAT11G1296 Cannabis sativa HOM05D001655 ORTHO05D001567 7.5e-09 63.5 40 77.5
Cfa013456 Carpinus fangiana HOM05D004601 ORTHO05D005806 7.5e-09 63.5 65 53.8
Glyma.17G058800 Glycine max HOM05D001655 ORTHO05D001567 7.5e-09 63.5 60 60.0
Lsat_1_v5_gn_5_83400 Lactuca sativa HOM05D001655 ORTHO05D001567 7.5e-09 63.5 43 74.4
Lj4g0008466 Lotus japonicus HOM05D001655 ORTHO05D001567 7.5e-09 63.5 43 74.4
Potri.006G075100 Populus trichocarpa HOM05D001655 ORTHO05D001567 7.5e-09 63.5 40 77.5
Rhsim01G0116400 Rhododendron simsii HOM05D001655 ORTHO05D001567 7.5e-09 63.5 40 77.5
Solyc07g008470.3 Solanum lycopersicum HOM05D001655 ORTHO05D001567 7.5e-09 63.5 43 74.4
Sopen07g004400 Solanum pennellii HOM05D001655 ORTHO05D001567 7.5e-09 63.5 43 74.4
vmacro14176 Vaccinium macrocarpon HOM05D001655 ORTHO05D001567 7.5e-09 63.5 37 81.1
vmacro20810 Vaccinium macrocarpon HOM05D001655 ORTHO05D001567 7.5e-09 63.5 37 81.1
MSTRG.5940 Avicennia marina HOM05D001655 ORTHO05D001567 9.8e-09 63.2 40 77.5
Hma1.2p1_1326F.1_g275880 Hydrangea macrophylla HOM05D001655 ORTHO05D001567 9.8e-09 63.2 43 72.1
SalBow1G1724 Salvia bowleyana HOM05D001655 ORTHO05D001567 9.8e-09 63.2 37 81.1
PGSC0003DMG400010973 Solanum tuberosum HOM05D001655 ORTHO05D001567 9.8e-09 63.2 43 74.4
TWI59G0536 Tripterygium wilfordii HOM05D001655 ORTHO05D001567 9.8e-09 63.2 43 72.1
TAR625G1148 Trochodendron aralioides HOM05D001655 ORTHO05D001567 9.8e-09 63.2 43 72.1
Ca_21255_v3 Cicer arietinum L. HOM05D001655 ORTHO05D001567 1.3e-08 62.8 43 72.1
MELO3C017426.2 Cucumis melo HOM05D001655 ORTHO05D001567 1.3e-08 62.8 43 69.8
CsaV3_1G031900 Cucumis sativus L. HOM05D001655 ORTHO05D001567 1.3e-08 62.8 43 69.8
DCAR_014669 Daucus carota HOM05D001655 ORTHO05D001567 1.3e-08 62.8 40 77.5
FAN22G1992 Fragaria x ananassa HOM05D001655 ORTHO05D001567 1.3e-08 62.8 43 72.1
MBI16_g05831_MAGBIO Magnolia biondii HOM05D001655 ORTHO05D001567 1.3e-08 62.8 43 72.1
Manes.06G018900 Manihot esculenta HOM05D001655 ORTHO05D001567 1.3e-08 62.8 40 75.0
Psat0s3389g0160 Pisum sativum HOM05D001655 ORTHO05D001567 1.3e-08 62.8 43 74.4
Prupe.1G074700 Prunus persica HOM05D001655 ORTHO05D001567 1.3e-08 62.8 43 72.1
PGR142G0110 Punica granatum HOM05D001655 ORTHO05D001567 1.3e-08 62.8 43 69.8
PGR142G1910 Punica granatum HOM05D001655 ORTHO05D001567 1.3e-08 62.8 43 69.8
VMungo1215G2778 Vigna mungo HOM05D001655 ORTHO05D001567 1.3e-08 62.8 40 75.0
Aqoxy7G02832 Aquilegia oxysepala HOM05D001655 ORTHO05D001567 1.7e-08 62.4 43 72.1
CSS0002580 Camellia sinensis var. sinensis HOM05D001655 ORTHO05D001567 1.7e-08 62.4 40 75.0
FvH4_4g07201 Fragaria vesca HOM05D001655 ORTHO05D001567 1.7e-08 62.4 43 72.1
AUR62040322 Chenopodium quinoa HOM05D001655 ORTHO05D001567 2.2e-08 62.0 40 75.0
Migut.J00794 Erythranthe guttata HOM05D001655 ORTHO05D001567 2.2e-08 62.0 40 75.0
Lalb_Chr07g0180661 Lupinus albus HOM05D001655 ORTHO05D001567 2.2e-08 62.0 43 69.8
Peaxi162Scf00046g00227 Petunia axillaris HOM05D001655 ORTHO05D001567 2.2e-08 62.0 36 77.8
Sabra06G0055800 Salix brachista HOM05D001655 ORTHO05D001567 2.2e-08 62.0 45 64.4
SGA_v2.0_scaffold31G12769 Striga asiatica HOM05D001655 ORTHO05D001567 2.2e-08 62.0 40 75.0
AUR62042143 Chenopodium quinoa HOM05D001655 ORTHO05D001567 2.9e-08 61.6 40 75.0
HanXRQChr10g0308911 Helianthus annuus HOM05D001655 ORTHO05D001567 2.9e-08 61.6 40 75.0
MD13G1239500 Malus domestica HOM05D001376 ORTHO05D004383 2.9e-08 61.6 37 78.4
MD16G1248200 Malus domestica HOM05D001655 ORTHO05D001567 2.9e-08 61.6 58 58.6
Thecc.09G186400 Theobroma cacao HOM05D001655 ORTHO05D001567 2.9e-08 61.6 40 72.5
Medtr4g127370 Medicago truncatula HOM05D003511 ORTHO05D004403 3.7e-08 61.2 43 72.1
EL10Ac7g17289 Beta vulgaris HOM05D001655 ORTHO05D001567 4.9e-08 60.8 40 72.5
ClCG06G013630 Citrullus lanatus HOM05D001655 ORTHO05D001567 4.9e-08 60.8 43 67.4
PSO063G3366 Papaver somniferum HOM05D001655 ORTHO05D001567 4.9e-08 60.8 43 72.1
PSO170G5289 Papaver somniferum HOM05D001655 ORTHO05D001567 4.9e-08 60.8 43 72.1
QL02p046996 Quercus lobata HOM05D001655 ORTHO05D001567 4.9e-08 60.8 40 72.5
Hund26162 Selenicereus undatus HOM05D001655 ORTHO05D001567 4.9e-08 60.8 40 72.5
Sc18g0007240 Simmondsia chinensis HOM05D001655 ORTHO05D001567 4.9e-08 60.8 40 72.5
Atru.chr7.752 Acer truncatum HOM05D001655 ORTHO05D001567 6.4e-08 60.5 43 67.4
Atru.chr7.773 Acer truncatum HOM05D001655 ORTHO05D001567 6.4e-08 60.5 43 67.4
Ah.15g091790 Amaranthus hybridus HOM05D001655 ORTHO05D001567 6.4e-08 60.5 40 72.5
Nn8g40750 Nelumbo nucifera HOM05D001655 ORTHO05D001567 1.1e-07 59.7 40 72.5
Sed0023599 Sechium edule HOM05D001655 ORTHO05D001567 1.4e-07 59.3 43 65.1
Ciclev10009962m.g Citrus clementina HOM05D001655 ORTHO05D001567 2.4e-07 58.5 40 70.0
CARHR270940 Cardamine hirsuta HOM05D001655 ORTHO05D001567 3.2e-07 58.2 43 76.7
ATR0626G104 Amborella trichopoda HOM05D001655 ORTHO05D001567 4.1e-07 57.8 43 65.1
Medtr4g127360 Medicago truncatula HOM05D001655 ORTHO05D001567 9.2e-07 56.6 37 67.6
SEGI_17219 Sequoiadendron giganteum HOM05D001655 ORTHO05D001567 9.2e-07 56.6 43 62.8
HPP92_018577 Vanilla planifolia HOM05D001655 ORTHO05D001567 9.2e-07 56.6 43 65.1
ECA234G3514 Erigeron canadensis HOM05D001655 ORTHO05D001567 1.2e-06 56.2 40 72.5
Zm00001eb226780 Zea mays HOM05D001655 ORTHO05D001567 2.0e-06 55.5 40 65.0
AagrBONN_evm.TU.Sc2ySwM_228.3909 Anthoceros agrestis HOM05D001655 ORTHO05D001567 3.5e-06 54.7 43 60.5
SMO364G0072 Selaginella moellendorffii HOM05D001655 ORTHO05D001567 7.8e-06 53.5 40 62.5


User provided reference genes

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