Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p07250 Brassica napus HOM05D007865 ORTHO05D010123 2.6e-144 515.4 267 100.0
A02p07230 Brassica napus HOM05D007865 ORTHO05D010123 3.2e-142 508.4 267 98.9
BraA02t05803Z Brassica rapa HOM05D007865 ORTHO05D010123 4.2e-142 508.1 267 98.9
A02p07240 Brassica napus HOM05D007865 ORTHO05D010123 7.2e-142 507.3 267 98.9
BraA02t05804Z Brassica rapa HOM05D007865 ORTHO05D010123 1.4e-137 493.0 268 97.4
A02p07380 Brassica napus HOM05D007865 ORTHO05D010123 1.5e-134 483.0 265 95.8
BraA02t05817Z Brassica rapa HOM05D007865 ORTHO05D010123 1.5e-134 483.0 265 95.8
BcaC03g14051 Brassica carinata HOM05D007865 ORTHO05D010123 3.4e-131 471.9 265 94.0
C02p12860 Brassica napus HOM05D007865 ORTHO05D010123 2.0e-128 462.6 265 92.8
BcaC03g14053 Brassica carinata HOM05D007865 ORTHO05D010123 2.7e-128 462.2 265 92.5
BolC2t07395H Brassica oleracea HOM05D007865 ORTHO05D010123 2.7e-128 462.2 265 92.5
BraA02t05802Z Brassica rapa HOM05D007865 ORTHO05D010123 4.5e-128 461.5 251 97.2
BcaC03g14047 Brassica carinata HOM05D007865 ORTHO05D010123 2.9e-127 458.8 265 91.3
BolC2t07384H Brassica oleracea HOM05D007865 ORTHO05D010123 3.8e-127 458.4 265 91.3
BolC2t07382H Brassica oleracea HOM05D007865 ORTHO05D010123 6.5e-127 457.6 265 91.7
BcaC03g14044 Brassica carinata HOM05D007865 ORTHO05D010123 1.2e-125 453.4 265 90.9
BolC2t07386H Brassica oleracea HOM05D007865 ORTHO05D010123 1.2e-125 453.4 265 90.9
BcaC03g14042 Brassica carinata HOM05D007865 ORTHO05D010123 2.7e-125 452.2 265 90.9
C02p12890 Brassica napus HOM05D007865 ORTHO05D010123 5.9e-120 434.5 269 87.7
C02p12920 Brassica napus HOM05D007865 ORTHO05D010123 3.4e-115 418.7 265 86.0
BcaC03g14023 Brassica carinata HOM05D007865 ORTHO05D010123 3.9e-111 405.2 266 84.6
C02p12610 Brassica napus HOM05D007865 ORTHO05D010123 1.1e-102 377.1 202 93.6
BcaB05g22473 Brassica carinata HOM05D007865 ORTHO05D010123 9.5e-102 374.0 307 70.0
BolC2t07361H Brassica oleracea HOM05D007865 ORTHO05D010123 2.2e-98 362.8 203 93.6
BolC2t07397H Brassica oleracea HOM05D007865 ORTHO05D010123 5.4e-97 358.2 202 90.1
BcaB05g22474 Brassica carinata HOM05D007865 ORTHO05D010123 2.2e-90 336.3 321 63.6
C02p12900 Brassica napus HOM05D007865 ORTHO05D010123 3.8e-82 308.9 177 92.1
BcaC03g14024 Brassica carinata HOM05D007865 ORTHO05D010123 7.9e-72 274.6 148 95.9
BolC2t07362H Brassica oleracea HOM05D007865 ORTHO05D010123 7.9e-72 274.6 148 95.9
C02p12910 Brassica napus HOM05D007865 ORTHO05D010123 4.0e-68 262.3 150 93.3
BcaB05g22471 Brassica carinata HOM05D007865 ORTHO05D010123 2.1e-61 240.0 294 53.4
Thhalv10015599m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 5.0e-42 175.6 238 50.0
C09p51140 Brassica napus HOM05D007865 ORTHO05D010123 7.2e-41 171.8 200 51.0
BolC9t57977H Brassica oleracea HOM05D007865 ORTHO05D010123 1.2e-40 171.0 200 51.0
A10p15310 Brassica napus HOM05D007865 ORTHO05D010123 1.6e-40 170.6 200 51.0
A10p15300 Brassica napus HOM05D007865 ORTHO05D010123 1.4e-39 167.5 200 49.5
BraA10t43702Z Brassica rapa HOM05D007865 ORTHO05D010123 1.4e-39 167.5 200 49.5
BcaB08g36307 Brassica carinata HOM05D007865 ORTHO05D010123 6.7e-39 165.2 206 48.1
AL4G20480 Arabidopsis lyrata HOM05D014137 ORTHO05D010123 2.0e-38 163.7 160 55.0
AL4G20500 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 2.0e-38 163.7 160 55.0
BcaB01g02171 Brassica carinata HOM05D007865 ORTHO05D010123 4.3e-38 162.5 213 48.4
BcaC03g14025 Brassica carinata HOM05D007865 ORTHO05D010123 2.8e-37 159.8 91 92.3
AL8G35160 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 8.2e-37 158.3 171 52.6
Thhalv10015349m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 5.3e-36 155.6 225 44.9
CARHR273100 Cardamine hirsuta HOM05D007865 ORTHO05D010123 3.4e-35 152.9 228 45.6
Thhalv10015750m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 1.7e-34 150.6 177 52.5
BcaB05g22499 Brassica carinata HOM05D007865 ORTHO05D010123 9.4e-33 144.8 96 79.2
AL8G35690 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 2.7e-32 143.3 142 54.2
C09p51150 Brassica napus HOM05D007865 ORTHO05D010123 4.7e-32 142.5 144 56.2
BolC9t57975H Brassica oleracea HOM05D007865 ORTHO05D010123 4.7e-32 142.5 200 46.0
Carub.0008s1968 Capsella rubella HOM05D007865 ORTHO05D010123 2.0e-30 137.1 191 44.0
Carub.0008s1992 Capsella rubella HOM05D007865 ORTHO05D010123 2.0e-30 137.1 191 44.0
BcaB03g13835 Brassica carinata HOM05D007865 ORTHO05D010123 8.2e-29 131.7 126 60.3
Thhalv10015954m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 7.0e-28 128.6 158 48.7
BraA10t43701Z Brassica rapa HOM05D007865 ORTHO05D010123 3.5e-27 126.3 173 47.4
Thhalv10028104m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 5.9e-27 125.6 148 51.4
BolC2t07399H Brassica oleracea HOM05D007865 ORTHO05D010123 2.9e-26 123.2 69 91.3
AL8G35420 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 1.1e-25 121.3 161 42.9
BolC2t07398H Brassica oleracea HOM05D007865 ORTHO05D010123 2.5e-25 120.2 97 75.3
Thhalv10028345m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 5.5e-25 119.0 144 49.3
Carub.0006s1626 Capsella rubella HOM05D007865 ORTHO05D010123 2.2e-18 97.1 167 39.5
Carub.0001s0263 Capsella rubella HOM05D007865 ORTHO05D010513 4.7e-16 89.4 224 31.7
BcaB02g07852 Brassica carinata HOM05D009350 ORTHO05D010513 1.8e-15 87.4 226 29.6
Thhalv10009374m.g Eutrema salsugineum HOM05D009272 ORTHO05D010513 1.8e-15 87.4 158 37.3
SpUn1022_0010 Schrenkiella parvula HOM05D007865 ORTHO05D010123 2.3e-15 87.0 56 73.2
BraA05t20584Z Brassica rapa HOM05D009350 ORTHO05D010513 4.0e-15 86.3 224 31.2
THA.LOC104813384 Tarenaya hassleriana HOM05D007865 ORTHO05D010123 5.2e-15 85.9 161 34.2
BraA05t20590Z Brassica rapa HOM05D009350 ORTHO05D010513 6.8e-15 85.5 255 31.0
A05p16790 Brassica napus HOM05D009350 ORTHO05D010513 1.2e-14 84.7 255 31.0
C06p16850 Brassica napus HOM05D009350 ORTHO05D010513 1.2e-14 84.7 195 33.3
BcaC08g44261 Brassica carinata HOM05D009350 ORTHO05D010513 1.5e-14 84.3 195 33.3
BcaC08g44264 Brassica carinata HOM05D009350 ORTHO05D010513 1.5e-14 84.3 195 33.3
BcaC08g44265 Brassica carinata HOM05D009350 ORTHO05D010513 1.5e-14 84.3 195 33.3
BcaC08g44267 Brassica carinata HOM05D009350 ORTHO05D010513 1.5e-14 84.3 195 33.3
A05p16820 Brassica napus HOM05D009350 ORTHO05D010513 1.5e-14 84.3 168 35.7
C06p16770 Brassica napus HOM05D009350 ORTHO05D010513 1.5e-14 84.3 195 33.3
C06p16820 Brassica napus HOM05D009350 ORTHO05D010513 1.5e-14 84.3 195 33.3
BolC6t36876H Brassica oleracea HOM05D009350 ORTHO05D010513 1.5e-14 84.3 195 33.3
BraA05t20583Z Brassica rapa HOM05D009350 ORTHO05D010513 1.5e-14 84.3 168 35.7
BraA05t20585Z Brassica rapa HOM05D009350 ORTHO05D010513 1.5e-14 84.3 168 35.7
AT3G46565 Arabidopsis thaliana HOM05D007865 ORTHO05D010123 3.4e-14 83.2 86 52.3
A05p16800 Brassica napus HOM05D009350 ORTHO05D010513 4.4e-14 82.8 230 31.3
CARHR249930 Cardamine hirsuta HOM05D009056 ORTHO05D011508 4.4e-14 82.8 149 36.9
C06p16700 Brassica napus HOM05D009350 ORTHO05D010513 5.7e-14 82.4 230 30.9
BolC6t36869H Brassica oleracea HOM05D009350 ORTHO05D010513 5.7e-14 82.4 230 30.9
C06p16790 Brassica napus HOM05D009350 ORTHO05D010513 1.3e-13 81.3 230 30.9
BolC6t36877H Brassica oleracea HOM05D009350 ORTHO05D010513 1.3e-13 81.3 230 30.9
C05p02270 Brassica napus HOM05D009272 ORTHO05D015471 2.2e-13 80.5 172 33.1
BcaB02g06921 Brassica carinata HOM05D009272 ORTHO05D015471 2.8e-13 80.1 192 31.8
BcaB02g06922 Brassica carinata HOM05D009272 ORTHO05D015471 2.8e-13 80.1 192 31.8
BcaB02g06923 Brassica carinata HOM05D009272 ORTHO05D010123 2.8e-13 80.1 192 31.8
BcaB02g06925 Brassica carinata HOM05D009272 ORTHO05D015471 2.8e-13 80.1 192 31.8
BcaB05g22472 Brassica carinata HOM05D007865 ORTHO05D010123 2.8e-13 80.1 47 80.9
AT1G35890 Arabidopsis thaliana HOM05D007865 ORTHO05D010123 4.8e-13 79.3 108 42.6
AL6G29200 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 6.3e-13 79.0 186 32.8
C05p01970 Brassica napus HOM05D009272 ORTHO05D015471 8.3e-13 78.6 196 31.6
BolC5t29005H Brassica oleracea HOM05D009272 ORTHO05D015471 8.3e-13 78.6 172 32.6
AL1G12990 Arabidopsis lyrata HOM05D009272 ORTHO05D010513 1.4e-12 77.8 168 32.1
AL1G13550 Arabidopsis lyrata HOM05D009272 ORTHO05D010513 1.4e-12 77.8 168 32.1
BcaC05g24525 Brassica carinata HOM05D009272 ORTHO05D015471 1.4e-12 77.8 172 32.6
BolC5t28976H Brassica oleracea HOM05D009272 ORTHO05D015471 1.4e-12 77.8 172 32.6
A10p02020 Brassica napus HOM05D009272 ORTHO05D015471 4.1e-12 76.3 172 32.6
A10p02460 Brassica napus HOM05D009272 ORTHO05D015471 4.1e-12 76.3 172 32.6
THA.LOC104806001 Tarenaya hassleriana HOM05D007865 ORTHO05D010513 4.1e-12 76.3 144 31.2
THA.LOC104806002 Tarenaya hassleriana HOM05D007865 ORTHO05D010513 4.1e-12 76.3 144 31.2
Thhalv10017733m.g Eutrema salsugineum HOM05D007865 ORTHO05D010513 5.4e-12 75.9 203 32.5
THA.LOC104818129 Tarenaya hassleriana HOM05D007865 ORTHO05D010513 5.4e-12 75.9 144 31.2
BraA10t42475Z Brassica rapa HOM05D009272 ORTHO05D015471 7.0e-12 75.5 186 32.3
A05p16860 Brassica napus HOM05D009350 ORTHO05D010513 9.1e-12 75.1 158 34.2
A05p16870 Brassica napus HOM05D009350 ORTHO05D010513 9.1e-12 75.1 158 34.2
BolC6t36881H Brassica oleracea HOM05D009350 ORTHO05D010513 9.1e-12 75.1 158 34.2
Thhalv10017700m.g Eutrema salsugineum HOM05D007865 ORTHO05D010513 9.1e-12 75.1 214 32.2
CARHR289550 Cardamine hirsuta HOM05D009350 ORTHO05D010513 1.6e-11 74.3 226 29.6
CiPaw.01G116900 Carya illinoinensis HOM05D007865 ORTHO05D011589 1.6e-11 74.3 168 32.7
Sp6g01800 Schrenkiella parvula HOM05D009056 ORTHO05D011508 2.0e-11 73.9 154 35.1
TAR362G0680 Trochodendron aralioides HOM05D000010 ORTHO05D001550 2.7e-11 73.6 192 32.8
BcaC08g44266 Brassica carinata HOM05D009350 ORTHO05D010513 3.5e-11 73.2 193 31.1
Thhalv10029188m.g Eutrema salsugineum HOM05D009056 ORTHO05D011508 3.5e-11 73.2 156 31.4
C09p01340 Brassica napus HOM05D009056 ORTHO05D011508 4.5e-11 72.8 133 33.8
BraA09t35794Z Brassica rapa HOM05D009056 ORTHO05D011508 4.5e-11 72.8 154 33.8
BolC6t36880H Brassica oleracea HOM05D009350 ORTHO05D010513 5.9e-11 72.4 172 32.0
Thhalv10015280m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 7.7e-11 72.0 163 35.0
Thhalv10017056m.g Eutrema salsugineum HOM05D007865 ORTHO05D010513 1.0e-10 71.6 215 30.2
BcaC04g24060 Brassica carinata HOM05D009056 ORTHO05D011508 1.3e-10 71.2 142 30.3
C09p01500 Brassica napus HOM05D009056 ORTHO05D011508 1.3e-10 71.2 142 30.3
BolC4t21858H Brassica oleracea HOM05D009272 ORTHO05D010513 1.7e-10 70.9 142 33.1
Carub.0001s0160 Capsella rubella HOM05D009350 ORTHO05D010513 1.7e-10 70.9 197 32.5
BcaB01g03533 Brassica carinata HOM05D009272 ORTHO05D010513 2.9e-10 70.1 163 33.1
C04p02040 Brassica napus HOM05D009272 ORTHO05D010513 2.9e-10 70.1 197 31.5
BolC4t21854H Brassica oleracea HOM05D009272 ORTHO05D010513 2.9e-10 70.1 197 31.5
BolC9t53085H Brassica oleracea HOM05D009056 ORTHO05D011508 3.8e-10 69.7 143 32.2
BcaC02g12724 Brassica carinata HOM05D009272 ORTHO05D010513 6.5e-10 68.9 197 29.9
A05p01760 Brassica napus HOM05D009272 ORTHO05D010513 1.5e-09 67.8 203 29.6
A09p01400 Brassica napus HOM05D009056 ORTHO05D011508 1.5e-09 67.8 143 31.5
BraA05t19173Z Brassica rapa HOM05D009272 ORTHO05D010513 1.5e-09 67.8 203 29.6
BraA09t35804Z Brassica rapa HOM05D009056 ORTHO05D011508 1.5e-09 67.8 143 31.5
Carub.0006s3546 Capsella rubella HOM05D009056 ORTHO05D011508 1.5e-09 67.8 167 32.3
BcaC02g12720 Brassica carinata HOM05D009272 ORTHO05D010513 1.9e-09 67.4 211 29.4
AT5G18300 Arabidopsis thaliana HOM05D007865 ORTHO05D010123 3.2e-09 66.6 176 32.4
BcaB01g02112 Brassica carinata HOM05D009056 ORTHO05D011508 3.2e-09 66.6 148 30.4
BcaC04g24073 Brassica carinata HOM05D009056 ORTHO05D011508 3.2e-09 66.6 133 33.1
BcaB01g02097 Brassica carinata HOM05D009056 ORTHO05D011508 7.2e-09 65.5 143 30.8
BcaC05g24482 Brassica carinata HOM05D009272 ORTHO05D010513 9.4e-09 65.1 190 28.9
BraA05t19178Z Brassica rapa HOM05D009272 ORTHO05D010513 1.2e-08 64.7 142 32.4
COL.COLO4_15554 Corchorus olitorius HOM05D002641 ORTHO05D001537 1.2e-08 64.7 187 33.2
BcaB02g06924 Brassica carinata HOM05D009272 ORTHO05D010513 6.1e-08 62.4 119 34.5
TAR362G1033 Trochodendron aralioides HOM05D007865 ORTHO05D013286 6.1e-08 62.4 168 32.7
A05p01800 Brassica napus HOM05D009272 ORTHO05D010513 8.0e-08 62.0 139 32.4
A09p01390 Brassica napus HOM05D009056 ORTHO05D027233 8.0e-08 62.0 152 29.6
BraA09t35803Z Brassica rapa HOM05D009056 ORTHO05D027233 8.0e-08 62.0 152 29.6
Thecc.05G193700 Theobroma cacao HOM05D018692 ORTHO05D013286 8.0e-08 62.0 188 29.8
Thecc.05G192300 Theobroma cacao HOM05D018692 ORTHO05D013286 1.4e-07 61.2 188 29.8
BraA03t12330Z Brassica rapa HOM05D009056 ORTHO05D011508 1.8e-07 60.8 129 31.8
C04p02100 Brassica napus HOM05D009272 ORTHO05D010513 2.3e-07 60.5 190 28.9
Thhalv10017577m.g Eutrema salsugineum HOM05D007865 ORTHO05D010513 4.0e-07 59.7 182 28.0
Thecc.05G196400 Theobroma cacao HOM05D018692 ORTHO05D013286 5.2e-07 59.3 188 29.8
BcaC04g24061 Brassica carinata HOM05D009056 ORTHO05D027233 8.8e-07 58.5 152 28.3
BolC9t53084H Brassica oleracea HOM05D009056 ORTHO05D027233 8.8e-07 58.5 152 28.3
Thecc.05G196200 Theobroma cacao HOM05D018692 ORTHO05D013286 8.8e-07 58.5 189 30.2
Thecc.05G197000 Theobroma cacao HOM05D018692 ORTHO05D013286 8.8e-07 58.5 189 30.2
AT1G03490 Arabidopsis thaliana HOM05D009272 ORTHO05D010513 1.5e-06 57.8 215 27.0
Thecc.10G077600 Theobroma cacao HOM05D028483 ORTHO05D013286 2.0e-06 57.4 184 31.0
FvH4_3g25830 Fragaria vesca HOM05D000010 ORTHO05D005236 4.4e-06 56.2 245 24.1
FAN11G1134 Fragaria x ananassa HOM05D000010 ORTHO05D005236 4.4e-06 56.2 220 25.5
AL6G29530 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 5.7e-06 55.8 132 32.6
Aa31LG5G8710 Aethionema arabicum HOM05D000010 ORTHO05D005236 7.5e-06 55.5 166 31.3
Peaxi162Scf00875g00111 Petunia axillaris HOM05D000010 ORTHO05D003912 7.5e-06 55.5 167 32.3
FAN16G0841 Fragaria x ananassa HOM05D000010 ORTHO05D005236 9.8e-06 55.1 220 25.0
Solyc10g055760.2 Solanum lycopersicum HOM05D000010 ORTHO05D003912 9.8e-06 55.1 180 30.6


User provided reference genes

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