Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p06390 Brassica napus HOM05D003803 ORTHO05D004456 1.2e-93 347.1 229 100.0
BraA02t05584Z Brassica rapa HOM05D003803 ORTHO05D004456 7.5e-93 344.4 229 99.1
BolC2t07055H Brassica oleracea HOM05D003803 ORTHO05D004456 1.6e-79 300.1 230 87.8
Sp6g23850 Schrenkiella parvula HOM05D003803 ORTHO05D004456 4.8e-63 245.4 147 81.0
A10p19380 Brassica napus HOM05D003803 ORTHO05D004456 1.3e-60 237.3 240 66.2
CARHR192170 Cardamine hirsuta HOM05D003803 ORTHO05D004456 2.4e-59 233.0 146 85.6
A03p10180 Brassica napus HOM05D003803 ORTHO05D004456 1.3e-57 227.3 140 79.3
BraA03t10328Z Brassica rapa HOM05D003803 ORTHO05D004456 1.3e-57 227.3 140 79.3
BraA10t44015Z Brassica rapa HOM05D003803 ORTHO05D004456 2.3e-57 226.5 253 62.5
C03p11700 Brassica napus HOM05D003803 ORTHO05D004456 3.9e-57 225.7 141 79.4
BolC3t13641H Brassica oleracea HOM05D003803 ORTHO05D004456 3.9e-57 225.7 141 79.4
C09p55600 Brassica napus HOM05D003803 ORTHO05D004456 5.6e-56 221.9 196 66.8
AL6G32180 Arabidopsis lyrata HOM05D003803 ORTHO05D004456 1.5e-53 213.8 204 69.1
AT5G20635 Arabidopsis thaliana HOM05D003803 ORTHO05D004456 8.4e-52 208.0 204 70.1
THA.LOC104799616 Tarenaya hassleriana HOM05D003803 ORTHO05D004456 9.3e-51 204.5 122 77.0
Thhalv10014548m.g Eutrema salsugineum HOM05D003803 ORTHO05D004456 1.6e-50 203.8 152 77.6
BolC9t58422H Brassica oleracea HOM05D003803 ORTHO05D004456 3.5e-50 202.6 212 60.4
Carub.0006s1897 Capsella rubella HOM05D003803 ORTHO05D004456 5.3e-46 188.7 103 85.4
THA.LOC104810996 Tarenaya hassleriana HOM05D003803 ORTHO05D004456 3.4e-45 186.0 243 48.6
Thecc.09G075700 Theobroma cacao HOM05D003803 ORTHO05D004456 6.5e-44 181.8 128 66.4
Duzib168G2099 Durio zibethinus HOM05D003803 ORTHO05D004456 4.2e-43 179.1 128 64.1
BNapus_Darmor_BZH_scaffold_38p01430 Brassica napus HOM05D003803 ORTHO05D004456 9.3e-43 177.9 142 100.0
MD15G1218900 Malus domestica HOM05D003803 ORTHO05D004456 1.2e-42 177.6 126 65.9
Manes.16G094800 Manihot esculenta HOM05D003803 ORTHO05D004456 1.2e-42 177.6 131 63.4
MD02G1093600 Malus domestica HOM05D003803 ORTHO05D004456 3.5e-42 176.0 126 66.7
Prupe.7G197000 Prunus persica HOM05D003803 ORTHO05D004456 7.9e-42 174.9 126 65.9
Potri.006G141100 Populus trichocarpa HOM05D003803 ORTHO05D004456 1.3e-41 174.1 121 67.8
BcaB01g04775 Brassica carinata HOM05D003803 ORTHO05D004456 1.1e-40 171.0 109 78.0
Manes.03G041000 Manihot esculenta HOM05D003803 ORTHO05D004456 1.9e-40 170.2 125 60.8
Gohir.A13G190300 Gossypium hirsutum HOM05D003803 ORTHO05D004456 5.7e-40 168.7 108 70.4
Gohir.D13G196350 Gossypium hirsutum HOM05D003803 ORTHO05D004456 5.7e-40 168.7 108 70.4
CsaV3_2G001120 Cucumis sativus L. HOM05D003803 ORTHO05D004456 1.3e-39 167.5 108 67.6
Gorai.001G015700 Gossypium raimondii HOM05D003803 ORTHO05D004456 1.3e-39 167.5 114 67.5
CiPaw.04G142500 Carya illinoinensis HOM05D003803 ORTHO05D004456 2.8e-39 166.4 131 58.0
Gohir.A07G015200 Gossypium hirsutum HOM05D003803 ORTHO05D004456 4.8e-39 165.6 114 67.5
Gorai.013G223800 Gossypium raimondii HOM05D003803 ORTHO05D004456 6.3e-39 165.2 112 67.9
Ciclev10010564m.g Citrus clementina HOM05D003803 ORTHO05D004456 4.1e-38 162.5 129 59.7
RcHm_v2.0_Chr2g0095321 Rosa chinensis HOM05D003803 ORTHO05D004456 5.3e-38 162.2 113 68.1
CiPaw.03G205300 Carya illinoinensis HOM05D003803 ORTHO05D004456 6.9e-38 161.8 124 62.1
Dinv42400 Davidia involucrata HOM05D003803 ORTHO05D004456 2.6e-37 159.8 133 61.7
CANSAT56G4286 Cannabis sativa HOM05D003803 ORTHO05D004456 3.4e-37 159.5 112 65.2
Duzib187G1358 Durio zibethinus HOM05D003803 ORTHO05D004456 5.9e-37 158.7 125 60.8
FvH4_1g08850 Fragaria vesca HOM05D003803 ORTHO05D004456 5.9e-37 158.7 112 67.0
TWI63G1012 Tripterygium wilfordii HOM05D003803 ORTHO05D004456 1.0e-36 157.9 109 65.1
Nn8g38618 Nelumbo nucifera HOM05D003803 ORTHO05D004456 1.7e-36 157.1 113 67.3
TWI34G0129 Tripterygium wilfordii HOM05D003803 ORTHO05D004456 1.7e-36 157.1 126 61.9
Lalb_Chr13g0299401 Lupinus albus HOM05D003803 ORTHO05D004456 2.2e-36 156.8 115 65.2
MELO3C015527.2 Cucumis melo HOM05D003803 ORTHO05D004456 8.5e-36 154.8 143 58.0
PGR044G0570 Punica granatum HOM05D003803 ORTHO05D004456 1.4e-35 154.1 154 62.3
Eucgr.C03259 Eucalyptus grandis HOM05D003803 ORTHO05D004456 2.5e-35 153.3 125 60.8
Migut.L01571 Erythranthe guttata HOM05D003803 ORTHO05D004456 7.2e-35 151.8 116 62.9
Potri.018G062400 Populus trichocarpa HOM05D003803 ORTHO05D004456 7.2e-35 151.8 113 64.6
Glyma.17G048600 Glycine max HOM05D003803 ORTHO05D004456 9.4e-35 151.4 111 64.0
Duzib150G1133 Durio zibethinus HOM05D003803 ORTHO05D004456 1.6e-34 150.6 126 57.9
Phvul.003G130200 Phaseolus vulgaris HOM05D003803 ORTHO05D004456 4.6e-34 149.1 115 62.6
Cc06_g12240 Coffea canephora HOM05D003803 ORTHO05D004456 6.1e-34 148.7 113 63.7
Hma1.2p1_0169F.1_g074460 Hydrangea macrophylla HOM05D003803 ORTHO05D004456 6.1e-34 148.7 121 61.2
SalBow5G3024 Salvia bowleyana HOM05D003803 ORTHO05D004456 6.1e-34 148.7 119 61.3
SalBow5G4531 Salvia bowleyana HOM05D003803 ORTHO05D004456 6.1e-34 148.7 119 61.3
TAR624G1266 Trochodendron aralioides HOM05D003803 ORTHO05D004456 1.4e-33 147.5 170 52.4
Gorai.010G088900 Gossypium raimondii HOM05D003803 ORTHO05D004456 3.0e-33 146.4 124 58.1
Lalb_Chr07g0181211 Lupinus albus HOM05D003803 ORTHO05D004456 3.0e-33 146.4 115 60.9
Gohir.A06G077000 Gossypium hirsutum HOM05D003803 ORTHO05D004456 3.9e-33 146.0 124 58.1
Gohir.D06G076000 Gossypium hirsutum HOM05D003803 ORTHO05D004456 5.1e-33 145.6 124 57.3
ClCG03G015020 Citrullus lanatus HOM05D003803 ORTHO05D004456 8.8e-33 144.8 104 62.5
Sabra06G0110200 Salix brachista HOM05D003803 ORTHO05D004456 8.8e-33 144.8 93 72.0
FAN26G0190 Fragaria x ananassa HOM05D003803 ORTHO05D004456 1.1e-32 144.4 85 76.5
VMungo1215G1786 Vigna mungo HOM05D003803 ORTHO05D004456 1.5e-32 144.1 92 70.7
Actinidia30227 Actinidia chinensis HOM05D003803 ORTHO05D004456 1.9e-32 143.7 106 67.0
GSVIVG01015067001 Vitis vinifera HOM05D003803 ORTHO05D004456 1.9e-32 143.7 118 62.7
Solyc07g041980.3 Solanum lycopersicum HOM05D003803 ORTHO05D004456 3.3e-32 142.9 121 57.9
FAN28G2731 Fragaria x ananassa HOM05D003803 ORTHO05D004456 5.7e-32 142.1 105 66.7
MSTRG.26474 Avicennia marina HOM05D003803 ORTHO05D004456 1.3e-31 141.0 116 59.5
Gohir.D07G014900 Gossypium hirsutum HOM05D003803 ORTHO05D004456 2.8e-31 139.8 112 58.9
Nitab4.5_0000343g0290 Nicotiana tabacum HOM05D003803 ORTHO05D004456 3.7e-31 139.4 85 76.5
QL11p000998 Quercus lobata HOM05D003803 ORTHO05D004456 4.8e-31 139.0 92 69.6
TPR.G12599 Trifolium pratense HOM05D003803 ORTHO05D004456 6.3e-31 138.7 107 60.7
Lj4g0012858 Lotus japonicus HOM05D003803 ORTHO05D004456 8.2e-31 138.3 90 66.7
Glyma.09G070100 Glycine max HOM05D003803 ORTHO05D004456 1.1e-30 137.9 114 57.9
CAN.G595.3 Capsicum annuum HOM05D003803 ORTHO05D004456 4.1e-30 136.0 114 58.8
Glyma.15G178100 Glycine max HOM05D003803 ORTHO05D004456 4.1e-30 136.0 122 52.5
Psat4g018440 Pisum sativum HOM05D003803 ORTHO05D004456 5.3e-30 135.6 86 68.6
Sed0004681 Sechium edule HOM05D003803 ORTHO05D004456 6.9e-30 135.2 147 46.9
Nn6g35693 Nelumbo nucifera HOM05D003803 ORTHO05D004456 9.1e-30 134.8 113 60.2
Lj6g0024210 Lotus japonicus HOM05D003803 ORTHO05D004456 1.5e-29 134.0 115 55.7
Sopen07g021560 Solanum pennellii HOM05D003803 ORTHO05D004456 4.5e-29 132.5 85 70.6
Medtr2g042200 Medicago truncatula HOM05D003803 ORTHO05D004456 5.9e-29 132.1 86 66.3
PSO421G0234 Papaver somniferum HOM05D003803 ORTHO05D004456 2.2e-28 130.2 110 58.2
Psat1g134600 Pisum sativum HOM05D003803 ORTHO05D004456 2.9e-28 129.8 119 57.1
PSO104G0196 Papaver somniferum HOM05D003803 ORTHO05D004456 3.8e-28 129.4 110 57.3
Sc18g0002620 Simmondsia chinensis HOM05D003803 ORTHO05D004456 3.8e-28 129.4 113 58.4
Glyma.13G110900 Glycine max HOM05D003803 ORTHO05D004456 5.0e-28 129.0 90 64.4
TPR.G8075 Trifolium pratense HOM05D003803 ORTHO05D004456 6.5e-28 128.6 86 65.1
Oeu007415.1 Olea europaea HOM05D003803 ORTHO05D004456 3.2e-27 126.3 111 56.8
Oeu000278.1 Olea europaea HOM05D003803 ORTHO05D004456 9.4e-27 124.8 112 55.4
arahy.Tifrunner.gnm1.ann1.TX00RK Arachis hypogaea HOM05D003803 ORTHO05D004456 1.6e-26 124.0 82 69.5
arahy.Tifrunner.gnm1.ann1.AJ3133 Arachis hypogaea HOM05D003803 ORTHO05D004456 3.6e-26 122.9 82 68.3
Actinidia29937 Actinidia chinensis HOM05D003803 ORTHO05D004456 6.1e-26 122.1 101 60.4
Dinv25550 Davidia involucrata HOM05D003803 ORTHO05D004456 5.1e-25 119.0 71 77.5
BcaB08g36515 Brassica carinata HOM05D003803 ORTHO05D004456 6.7e-25 118.6 61 90.2
MSTRG.10505 Avicennia marina HOM05D003803 ORTHO05D004456 2.0e-24 117.1 115 55.7
Actinidia39653 Actinidia chinensis HOM05D003803 ORTHO05D004456 3.3e-24 116.3 90 65.6
Peaxi162Scf00348g00817 Petunia axillaris HOM05D003803 ORTHO05D004456 5.7e-24 115.5 69 78.3
Sed0026577 Sechium edule HOM05D003803 ORTHO05D004456 5.7e-24 115.5 77 70.1
Manes.11G018700 Manihot esculenta HOM05D003803 ORTHO05D004456 4.8e-23 112.5 110 50.0
Cpa.g.sc28.25 Carica papaya HOM05D003803 ORTHO05D004456 8.2e-23 111.7 69 73.9
MELO3C004657.2 Cucumis melo HOM05D003803 ORTHO05D004456 1.4e-22 110.9 63 76.2
BcaC03g13781 Brassica carinata HOM05D003803 ORTHO05D004456 1.8e-22 110.5 62 93.5
HPP92_004363 Vanilla planifolia HOM05D003803 ORTHO05D004456 7.0e-22 108.6 80 58.8
DCAR_024755 Daucus carota HOM05D003803 ORTHO05D004456 9.1e-22 108.2 154 39.6
Aqoxy7G01029 Aquilegia oxysepala HOM05D003803 ORTHO05D004456 4.5e-21 105.9 75 69.3
Zm00001eb314160 Zea mays HOM05D003803 ORTHO05D004456 7.7e-21 105.1 118 46.6
Lalb_Chr11g0074261 Lupinus albus HOM05D003803 ORTHO05D004456 1.0e-20 104.8 115 46.1
FAN23G2205 Fragaria x ananassa HOM05D003803 ORTHO05D004456 6.5e-20 102.1 59 79.7
Zm00001eb100230 Zea mays HOM05D003803 ORTHO05D004456 6.5e-20 102.1 104 49.0
Os08g0456600 Oryza sativa ssp. japonica HOM05D003803 ORTHO05D004456 1.9e-19 100.5 80 52.5
ATR0598G175 Amborella trichopoda HOM05D003803 ORTHO05D004456 3.2e-19 99.8 83 55.4
Hund26046 Selenicereus undatus HOM05D003803 ORTHO05D004456 9.4e-19 98.2 59 76.3
BcaB05g22827 Brassica carinata HOM05D003803 ORTHO05D004456 1.2e-18 97.8 61 83.6
Hma1.2p1_0179F.1_g079480 Hydrangea macrophylla HOM05D003803 ORTHO05D004456 1.2e-18 97.8 133 45.9
HanXRQChr10g0319741 Helianthus annuus HOM05D003803 ORTHO05D004456 2.7e-18 96.7 97 52.6
arahy.Tifrunner.gnm1.ann1.1Y26QK Arachis hypogaea HOM05D003803 ORTHO05D004456 4.7e-18 95.9 91 50.5
arahy.Tifrunner.gnm1.ann1.KPGD7J Arachis hypogaea HOM05D003803 ORTHO05D004456 4.7e-18 95.9 91 50.5
CDE05G2490 Ceratophyllum demersum HOM05D003803 ORTHO05D004456 4.7e-18 95.9 112 46.4
FAN19G2912 Fragaria x ananassa HOM05D003803 ORTHO05D004456 4.7e-18 95.9 55 81.8
Sed0024871 Sechium edule HOM05D003803 ORTHO05D004456 8.0e-18 95.1 112 45.5
RcHm_v2.0_Chr6g0246401 Rosa chinensis HOM05D003803 ORTHO05D004456 3.9e-17 92.8 77 53.2
ClCG11G001400 Citrullus lanatus HOM05D003803 ORTHO05D004456 8.8e-17 91.7 115 43.5
Atru.chr7.1717 Acer truncatum HOM05D003803 ORTHO05D004456 1.1e-16 91.3 67 62.7
Os09g0441900 Oryza sativa ssp. japonica HOM05D003803 ORTHO05D004456 1.1e-16 91.3 98 48.0
Sc15g0000470 Simmondsia chinensis HOM05D003803 ORTHO05D004456 1.5e-16 90.9 122 44.3
SGA_v2.0_scaffold21G09503 Striga asiatica HOM05D003803 ORTHO05D004456 4.4e-16 89.4 84 56.0
CsaV3_1G041120 Cucumis sativus L. HOM05D003803 ORTHO05D004456 5.7e-16 89.0 62 69.4
Lsat_1_v5_gn_4_94241 Lactuca sativa HOM05D003803 ORTHO05D004456 7.4e-16 88.6 167 37.7
HPP92_016238 Vanilla planifolia HOM05D003803 ORTHO05D004456 1.7e-15 87.4 111 45.0
Atru.chr1.4007 Acer truncatum HOM05D003803 ORTHO05D004456 1.4e-14 84.3 69 60.9
Lalb_Chr04g0263591 Lupinus albus HOM05D003803 ORTHO05D004456 4.1e-14 82.8 114 41.2
Ca_02184_v3 Cicer arietinum L. HOM05D003803 ORTHO05D004456 7.0e-14 82.0 57 68.4
Rhsim03G0227100 Rhododendron simsii HOM05D003803 ORTHO05D004456 7.0e-14 82.0 72 61.1
Glyma.07G040200 Glycine max HOM05D003803 ORTHO05D004456 1.0e-12 78.2 123 38.2
Os03g0407400 Oryza sativa ssp. japonica HOM05D003803 ORTHO05D004456 1.0e-12 78.2 126 38.1
COL.COLO4_30738 Corchorus olitorius HOM05D003803 ORTHO05D004456 2.2e-12 77.0 66 54.5
Medtr8g021170 Medicago truncatula HOM05D003803 ORTHO05D004456 2.9e-12 76.6 117 38.5
QL05p003994 Quercus lobata HOM05D003803 ORTHO05D004456 2.9e-12 76.6 92 41.3
SEGI_34897 Sequoiadendron giganteum HOM05D003803 ORTHO05D004456 2.9e-12 76.6 73 42.5
ECA232G3825 Erigeron canadensis HOM05D003803 ORTHO05D004456 3.8e-12 76.3 95 43.2
Haze_26022 Corylus avellana HOM05D003803 ORTHO05D004456 1.5e-11 74.3 49 73.5
Zm00001eb019600 Zea mays HOM05D003803 ORTHO05D004456 1.5e-11 74.3 130 36.9
SGA_v2.0_scaffold609G53181 Striga asiatica HOM05D003803 ORTHO05D004456 3.2e-11 73.2 62 59.7
HanXRQChr12g0354391 Helianthus annuus HOM05D003803 ORTHO05D004456 4.2e-11 72.8 125 37.6
Nitab4.5_0009541g0010 Nicotiana tabacum HOM05D003803 ORTHO05D004456 4.2e-11 72.8 39 89.7
HanXRQChr09g0276811 Helianthus annuus HOM05D003803 ORTHO05D004456 7.2e-11 72.0 71 49.3
PGSC0003DMG400027887 Solanum tuberosum HOM05D003803 ORTHO05D004456 9.4e-11 71.6 48 77.1
FAN26G2608 Fragaria x ananassa HOM05D003803 ORTHO05D004456 1.2e-10 71.2 37 91.9
Rhsim05G0007000 Rhododendron simsii HOM05D003803 ORTHO05D004456 1.6e-10 70.9 44 79.5
TPR.G16739 Trifolium pratense HOM05D003803 ORTHO05D004456 1.6e-10 70.9 61 52.5
COL.COLO4_18088 Corchorus olitorius HOM05D003803 ORTHO05D004456 2.1e-10 70.5 49 71.4
Thecc.06G122400 Theobroma cacao HOM05D003803 ORTHO05D004456 2.1e-10 70.5 117 42.7
unitig_699.g19272 Utricularia gibba HOM05D003803 ORTHO05D004456 6.1e-10 68.9 51 64.7
Ca_09305_v3 Cicer arietinum L. HOM05D003803 ORTHO05D004456 8.0e-10 68.6 37 89.2
vmacro06347 Vaccinium macrocarpon HOM05D003803 ORTHO05D004456 8.0e-10 68.6 39 82.1
unitig_85.g27251 Utricularia gibba HOM05D003803 ORTHO05D004456 1.0e-09 68.2 38 81.6
Psat4g168440 Pisum sativum HOM05D003803 ORTHO05D004456 2.3e-09 67.0 61 50.8
TAR636G1611 Trochodendron aralioides HOM05D003803 ORTHO05D004456 2.3e-09 67.0 58 63.8
MBI13_g43925_MAGBIO Magnolia biondii HOM05D003803 ORTHO05D004456 3.0e-09 66.6 81 42.0
CSS0005199 Camellia sinensis var. sinensis HOM05D003803 ORTHO05D004456 4.0e-09 66.2 55 60.0
RcHm_v2.0_Chr6g0246681 Rosa chinensis HOM05D003803 ORTHO05D004456 4.0e-09 66.2 58 50.0
Oeu060649.1 Olea europaea HOM05D003803 ORTHO05D004456 3.3e-08 63.2 38 76.3
SEGI_33452 Sequoiadendron giganteum HOM05D003803 ORTHO05D004456 3.3e-08 63.2 106 37.7
Haze_16046 Corylus avellana HOM05D000015 ORTHO05D000249 4.4e-08 62.8 58 60.3
Hma1.2p1_0291F.1_g114940 Hydrangea macrophylla HOM05D003803 ORTHO05D004456 2.8e-07 60.1 46 60.9


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