Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 2.8e-117 425.2 211 100.0
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 1.1e-113 413.3 217 96.3
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 2.3e-103 379.0 189 100.0
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 6.8e-103 377.5 190 97.9
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 1.5e-102 376.3 190 97.4
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 7.5e-102 374.0 190 96.8
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 1.2e-94 350.1 189 90.5
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 1.3e-93 346.7 189 89.9
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 2.9e-93 345.5 189 90.5
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 3.7e-93 345.1 189 89.9
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 1.4e-92 343.2 189 90.5
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 5.4e-92 341.3 189 88.9
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 1.2e-86 323.6 189 82.0
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 3.5e-83 312.0 189 81.0
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 5.4e-76 288.1 189 72.5
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 1.6e-75 286.6 177 79.7
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 2.1e-75 286.2 189 71.4
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 4.6e-75 285.0 189 73.0
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 1.1e-73 280.4 189 69.8
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 1.5e-73 280.0 189 68.8
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.9e-73 279.6 189 74.1
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 2.5e-73 279.3 189 72.5
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 4.3e-73 278.5 189 72.5
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 5.6e-73 278.1 189 72.5
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 9.6e-73 277.3 189 71.4
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 3.6e-72 275.4 194 68.6
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 3.6e-72 275.4 189 70.9
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 6.2e-72 274.6 189 70.4
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 1.1e-71 273.9 195 70.8
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 1.4e-71 273.5 189 69.8
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 4.0e-71 271.9 190 69.5
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 4.0e-71 271.9 195 69.7
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 5.3e-71 271.6 194 68.0
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 6.9e-71 271.2 195 68.7
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 9.0e-71 270.8 189 69.3
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 1.5e-70 270.0 189 67.7
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 9.9e-70 267.3 189 67.7
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 9.9e-70 267.3 185 69.7
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 2.2e-69 266.2 193 69.4
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 8.4e-69 264.2 189 69.3
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 1.4e-68 263.5 223 62.3
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 1.9e-68 263.1 189 67.2
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 4.2e-68 261.9 189 67.2
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 3.5e-67 258.8 195 65.1
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 4.6e-67 258.5 197 65.5
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 1.0e-66 257.3 189 66.7
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 3.9e-66 255.4 190 66.3
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 5.1e-66 255.0 189 66.1
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 1.3e-64 250.4 190 64.7
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 3.6e-64 248.8 188 65.4
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 4.8e-64 248.4 188 64.4
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 6.9e-63 244.6 251 52.2
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 1.2e-62 243.8 183 65.6
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 2.6e-62 242.7 200 64.5
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 4.5e-62 241.9 190 65.8
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 4.5e-62 241.9 190 65.8
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 1.3e-61 240.4 186 62.4
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 1.3e-61 240.4 188 64.4
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 1.3e-61 240.4 191 60.7
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 2.9e-61 239.2 191 62.3
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 2.9e-61 239.2 191 60.2
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 4.9e-61 238.4 189 61.9
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 2.4e-60 236.1 192 62.5
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 4.2e-60 235.3 190 61.1
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 1.2e-59 233.8 191 60.2
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 1.6e-59 233.4 200 63.5
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 2.1e-59 233.0 192 59.4
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 2.7e-59 232.6 188 62.8
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 1.0e-58 230.7 191 63.9
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 1.0e-58 230.7 189 64.0
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 1.0e-58 230.7 192 63.5
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 1.3e-58 230.3 189 59.8
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 1.8e-58 229.9 189 59.3
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 3.0e-58 229.2 190 57.9
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 5.1e-58 228.4 189 59.3
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 6.7e-58 228.0 210 56.2
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 1.1e-57 227.3 192 58.9
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 1.9e-57 226.5 150 69.3
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 1.9e-57 226.5 190 58.4
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 2.5e-57 226.1 188 61.2
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 2.5e-57 226.1 188 61.2
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 9.6e-57 224.2 188 60.6
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 1.3e-56 223.8 189 57.7
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 1.8e-55 219.9 189 60.3
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 4.0e-55 218.8 159 67.3
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 1.2e-54 217.2 188 60.1
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 2.6e-54 216.1 191 56.5
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 5.8e-54 214.9 190 60.5
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 1.0e-53 214.2 142 70.4
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 2.9e-53 212.6 184 61.4
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 1.1e-52 210.7 151 67.5
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 1.1e-52 210.7 190 55.8
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 3.2e-52 209.1 190 60.5
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 2.7e-51 206.1 156 63.5
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 6.2e-48 194.9 190 57.4
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 5.3e-47 191.8 141 67.4
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 6.9e-47 191.4 169 57.4
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 3.8e-45 185.7 161 57.1
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 1.1e-44 184.1 145 64.1
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 3.9e-42 175.6 190 52.1
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 1.0e-37 161.0 190 50.5
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 1.2e-35 154.1 134 55.2
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.1e-33 147.5 103 70.9
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 1.5e-33 147.1 185 46.5
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 4.3e-33 145.6 189 42.9
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 1.3e-32 144.1 96 70.8
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 6.5e-29 131.7 87 70.1
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 2.1e-27 126.7 161 43.5
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 6.1e-27 125.2 161 39.8
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 1.8e-26 123.6 89 66.3
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 2.0e-22 110.2 96 54.2
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 2.7e-19 99.8 121 38.8
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 8.0e-19 98.2 168 33.3
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 5.2e-18 95.5 87 60.9
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 8.8e-18 94.7 66 74.2
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 1.3e-16 90.9 75 60.0
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 1.7e-13 80.5 100 48.0
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 1.8e-10 70.5 95 32.6
Cpa.g.sc75.50 Carica papaya HOM05D006513 ORTHO05D008150 2.2e-08 63.5 47 70.2
RcHm_v2.0_Chr7g0212941 Rosa chinensis HOM05D006513 ORTHO05D008150 1.1e-07 61.2 45 68.9
AUR62043674 Chenopodium quinoa HOM05D006513 ORTHO05D003876 1.8e-07 60.5 46 58.7
vmacro22116 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 7.7e-06 55.1 98 37.8


User provided reference genes

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