Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p05940 Brassica napus HOM05D008081 ORTHO05D010223 3.1e-237 824.7 401 100.0
BraA02t05546Z Brassica rapa HOM05D008081 ORTHO05D010223 3.1e-237 824.7 401 100.0
BolC2t06998H Brassica oleracea HOM05D008081 ORTHO05D010223 3.0e-232 808.1 401 97.5
BNapus_Darmor_BZH_scaffold_38p01920 Brassica napus HOM05D008081 ORTHO05D010223 2.5e-231 805.1 401 97.0
Sp6g24410 Schrenkiella parvula HOM05D008081 ORTHO05D010223 4.2e-218 761.1 403 92.1
Thhalv10013658m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 6.2e-214 747.3 403 90.6
AT5G19970 Arabidopsis thaliana HOM05D008081 ORTHO05D010223 9.6e-207 723.4 403 88.3
Carub.0006s1834 Capsella rubella HOM05D008081 ORTHO05D010223 9.3e-202 706.8 404 87.1
Thhalv10013905m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 1.5e-188 662.9 364 88.5
CARHR192880 Cardamine hirsuta HOM05D008081 ORTHO05D010223 7.2e-186 654.1 367 86.9
AL6G31500 Arabidopsis lyrata HOM05D008081 ORTHO05D010223 1.3e-184 649.8 365 87.1
Aa31LG4G11630 Aethionema arabicum HOM05D008081 ORTHO05D010223 4.7e-145 518.5 354 73.4
BcaB05g22890 Brassica carinata HOM05D008081 ORTHO05D010223 6.6e-131 471.5 238 95.0
COL.COLO4_34977 Corchorus olitorius HOM05D008081 ORTHO05D010223 9.9e-111 404.4 402 52.0
THA.LOC104815107 Tarenaya hassleriana HOM05D008081 ORTHO05D010223 2.9e-110 402.9 400 52.8
Duzib168G0460 Durio zibethinus HOM05D008081 ORTHO05D010223 2.7e-108 396.4 397 53.4
Thecc.09G118700 Theobroma cacao HOM05D008081 ORTHO05D010223 6.6e-107 391.7 398 51.8
Gohir.A06G059000 Gossypium hirsutum HOM05D008081 ORTHO05D010223 1.0e-99 367.9 395 49.6
Gorai.010G066900 Gossypium raimondii HOM05D008081 ORTHO05D010223 2.3e-99 366.7 395 49.6
Gohir.D06G057200 Gossypium hirsutum HOM05D008081 ORTHO05D010223 8.7e-99 364.8 395 49.4
Medtr2g055250 Medicago truncatula HOM05D008081 ORTHO05D010223 1.6e-97 360.5 394 49.7
Psat1g025520 Pisum sativum HOM05D008081 ORTHO05D010223 3.6e-97 359.4 396 48.7
Lalb_Chr01g0020971 Lupinus albus HOM05D008081 ORTHO05D010223 8.1e-97 358.2 401 48.4
Glyma.06G213000 Glycine max HOM05D008081 ORTHO05D010223 6.9e-96 355.1 398 47.7
Cpa.g.sc75.87 Carica papaya HOM05D008081 ORTHO05D010223 9.9e-95 351.3 370 50.0
Glyma.04G150400 Glycine max HOM05D008081 ORTHO05D010223 1.3e-94 350.9 397 47.4
Ca_02616_v3 Cicer arietinum L. HOM05D008081 ORTHO05D010223 1.4e-93 347.4 399 48.4
Hma1.2p1_0018F.1_g012950 Hydrangea macrophylla HOM05D008081 ORTHO05D010223 1.4e-93 347.4 399 45.6
Ciclev10008639m.g Citrus clementina HOM05D008081 ORTHO05D010223 3.2e-93 346.3 398 46.0
ECA234G2703 Erigeron canadensis HOM05D008081 ORTHO05D010223 1.6e-92 344.0 405 46.7
Lj1g0011101 Lotus japonicus HOM05D008081 ORTHO05D010223 1.8e-91 340.5 403 47.6
Atru.chr7.1264 Acer truncatum HOM05D008081 ORTHO05D010223 2.3e-91 340.1 408 44.4
Nitab4.5_0000282g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 2.3e-91 340.1 397 44.8
QL02p086958 Quercus lobata HOM05D008081 ORTHO05D010223 3.0e-91 339.7 395 47.1
Aqoxy7G01970 Aquilegia oxysepala HOM05D008081 ORTHO05D010223 3.9e-91 339.3 395 46.6
TWI34G1060 Tripterygium wilfordii HOM05D008081 ORTHO05D010223 3.9e-91 339.3 389 46.8
Cc06_g09100 Coffea canephora HOM05D008081 ORTHO05D010223 5.1e-91 339.0 398 45.0
Lsat_1_v5_gn_5_98420 Lactuca sativa HOM05D008081 ORTHO05D010223 8.7e-91 338.2 401 46.1
Phvul.009G199400 Phaseolus vulgaris HOM05D008081 ORTHO05D010223 1.1e-90 337.8 389 46.8
HanXRQChr10g0316871 Helianthus annuus HOM05D008081 ORTHO05D010223 1.9e-90 337.0 404 44.8
Nn2g11886 Nelumbo nucifera HOM05D008081 ORTHO05D010223 4.3e-90 335.9 393 46.6
PGR142G1327 Punica granatum HOM05D008081 ORTHO05D010223 1.3e-89 334.3 402 44.3
VMungo1309G1591 Vigna mungo HOM05D008081 ORTHO05D010223 6.2e-89 332.0 400 45.0
PSO765G0202 Papaver somniferum HOM05D008081 ORTHO05D010223 1.1e-88 331.3 392 45.7
Manes.14G127800 Manihot esculenta HOM05D008081 ORTHO05D010223 5.3e-88 328.9 392 44.4
CANSAT56G1336 Cannabis sativa HOM05D008081 ORTHO05D010223 9.0e-88 328.2 399 43.9
Potri.018G071900 Populus trichocarpa HOM05D008081 ORTHO05D010223 9.9e-87 324.7 414 43.0
Eucgr.L02382 Eucalyptus grandis HOM05D008081 ORTHO05D010223 1.3e-86 324.3 398 43.2
PGSC0003DMG400015624 Solanum tuberosum HOM05D008081 ORTHO05D010223 4.9e-86 322.4 399 44.1
Sabra18G0062600 Salix brachista HOM05D008081 ORTHO05D010223 8.4e-86 321.6 394 43.4
PSO349G0241 Papaver somniferum HOM05D008081 ORTHO05D010223 4.2e-85 319.3 394 44.9
Sopen08g011800 Solanum pennellii HOM05D008081 ORTHO05D010223 1.2e-84 317.8 400 44.2
DCAR_009223 Daucus carota HOM05D008081 ORTHO05D010223 4.6e-84 315.8 406 43.8
Solyc08g041700.1 Solanum lycopersicum HOM05D008081 ORTHO05D010223 4.6e-84 315.8 400 44.0
MBI04_g33811_MAGBIO Magnolia biondii HOM05D008081 ORTHO05D010223 6.0e-84 315.5 391 42.7
GSVIVG01015465001 Vitis vinifera HOM05D008081 ORTHO05D010223 4.3e-82 309.3 398 41.7
TAR383G0366 Trochodendron aralioides HOM05D008081 ORTHO05D010223 5.6e-82 308.9 393 44.3
BcaC03g13723 Brassica carinata HOM05D008081 ORTHO05D010223 1.4e-80 304.3 150 97.3
Oeu032197.1 Olea europaea HOM05D008081 ORTHO05D010223 2.1e-76 290.4 396 41.7
Nitab4.5_0003085g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 2.7e-76 290.0 360 43.3
CSS0008637 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 7.4e-74 282.0 326 46.9
CSS0001106 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 3.4e-71 273.1 326 46.0
Eucgr.C01103 Eucalyptus grandis HOM05D008081 ORTHO05D010223 1.8e-64 250.8 325 41.8
Actinidia09389 Actinidia chinensis HOM05D008081 ORTHO05D010223 4.1e-64 249.6 321 45.5
CSS0031360 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 6.9e-64 248.8 326 44.2
Peaxi162Scf00292g00051 Petunia axillaris HOM05D008081 ORTHO05D010223 4.5e-63 246.1 295 43.7
Zm00001eb158500 Zea mays HOM05D008081 ORTHO05D010223 9.4e-61 238.4 404 36.4
Os01g0647000 Oryza sativa ssp. japonica HOM05D008081 ORTHO05D010223 1.0e-59 235.0 395 38.2
ATR0083G076 Amborella trichopoda HOM05D008081 ORTHO05D010223 2.0e-55 220.7 381 34.4
Dinv36582 Davidia involucrata HOM05D008081 ORTHO05D010223 2.0e-55 220.7 314 40.4
CSS0020794 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.8e-51 207.6 388 35.6
TPR.G30892 Trifolium pratense HOM05D008081 ORTHO05D010223 5.2e-35 152.9 203 38.4


User provided reference genes

Program Settings