Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p05630 Brassica napus HOM05D005548 ORTHO05D007497 3.2e-262 907.9 464 100.0
BraA02t05515Z Brassica rapa HOM05D005548 ORTHO05D007497 3.2e-262 907.9 464 100.0
BolC2t06964H Brassica oleracea HOM05D005548 ORTHO05D007497 9.6e-251 869.8 469 95.9
BcaC03g13685 Brassica carinata HOM05D005548 ORTHO05D007497 1.8e-249 865.5 469 95.3
BNapus_Darmor_BZH_scaffold_38p02320 Brassica napus HOM05D005548 ORTHO05D007497 1.8e-249 865.5 469 95.3
BcaB05g23389 Brassica carinata HOM05D005548 ORTHO05D007497 8.7e-244 846.7 470 93.0
Sp6g24840 Schrenkiella parvula HOM05D005548 ORTHO05D007497 1.9e-227 792.3 472 87.9
Thhalv10013469m.g Eutrema salsugineum HOM05D005548 ORTHO05D007497 4.3e-227 791.2 471 86.4
CARHR193360 Cardamine hirsuta HOM05D005548 ORTHO05D007497 6.5e-215 750.7 465 83.7
Carub.0006s1789 Capsella rubella HOM05D005548 ORTHO05D007497 6.7e-212 740.7 465 83.4
AT5G19540 Arabidopsis thaliana HOM05D005548 ORTHO05D007497 3.3e-211 738.4 465 82.6
AL6G31050 Arabidopsis lyrata HOM05D005548 ORTHO05D007497 1.3e-207 726.5 470 81.1
Aa31LG4G18070 Aethionema arabicum HOM05D005548 ORTHO05D007497 2.6e-195 685.6 467 76.2
THA.LOC104811114 Tarenaya hassleriana HOM05D005548 ORTHO05D007497 1.9e-174 616.3 470 68.1
Eucgr.C01037 Eucalyptus grandis HOM05D005548 ORTHO05D007497 3.1e-164 582.4 474 63.9
Manes.03G021300 Manihot esculenta HOM05D005548 ORTHO05D007497 1.2e-163 580.5 476 63.9
GSVIVG01015386001 Vitis vinifera HOM05D005548 ORTHO05D007497 1.3e-162 577.0 426 67.8
PGR142G0895 Punica granatum HOM05D005548 ORTHO05D007497 2.2e-162 576.2 463 65.2
Thecc.09G109700 Theobroma cacao HOM05D005548 ORTHO05D007497 4.9e-162 575.1 470 63.8
ClCG00G004520 Citrullus lanatus HOM05D005548 ORTHO05D007497 1.4e-161 573.5 412 68.9
Haze_25723 Corylus avellana HOM05D005548 ORTHO05D007497 1.4e-161 573.5 467 64.9
Actinidia09420 Actinidia chinensis HOM05D005548 ORTHO05D007497 5.4e-161 571.6 399 69.9
Haze_25730 Corylus avellana HOM05D005548 ORTHO05D007497 5.4e-161 571.6 467 64.7
Glyma.07G085900 Glycine max HOM05D005548 ORTHO05D007497 5.4e-161 571.6 453 64.5
Glyma.09G191000 Glycine max HOM05D005548 ORTHO05D007497 2.1e-160 569.7 405 69.4
QL02p085206 Quercus lobata HOM05D005548 ORTHO05D007497 2.7e-160 569.3 410 69.0
MELO3C025346.2 Cucumis melo HOM05D005548 ORTHO05D007497 6.0e-160 568.2 408 68.6
Gohir.A07G006100 Gossypium hirsutum HOM05D005548 ORTHO05D007497 7.8e-160 567.8 390 71.5
Gohir.D07G005900 Gossypium hirsutum HOM05D005548 ORTHO05D007497 7.8e-160 567.8 390 71.8
Cfa021563 Carpinus fangiana HOM05D005548 ORTHO05D007497 1.0e-159 567.4 467 63.4
VMungo0464G1126 Vigna mungo HOM05D005548 ORTHO05D007497 2.3e-159 566.2 456 64.0
Gorai.001G005500 Gossypium raimondii HOM05D005548 ORTHO05D007497 3.0e-159 565.8 390 71.3
Dinv36636 Davidia involucrata HOM05D005548 ORTHO05D007497 3.9e-159 565.5 453 63.4
EL10Ac8g18489 Beta vulgaris HOM05D005548 ORTHO05D007497 5.1e-159 565.1 449 65.0
Hma1.2p1_0518F.1_g171060 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 6.6e-159 564.7 412 67.7
Sed0013441 Sechium edule HOM05D005548 ORTHO05D007497 8.6e-159 564.3 462 63.2
Duzib168G0181 Durio zibethinus HOM05D005548 ORTHO05D007497 1.1e-158 563.9 452 65.3
Lj2g0015861 Lotus japonicus HOM05D005548 ORTHO05D007497 1.5e-158 563.5 410 67.8
Lalb_Chr14g0371531 Lupinus albus HOM05D005548 ORTHO05D007497 1.5e-158 563.5 401 69.6
CSS0001162 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.9e-158 563.1 469 64.0
Cpa.g.sc23.102 Carica papaya HOM05D005548 ORTHO05D007497 1.9e-158 563.1 471 62.8
CSS0009071 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 2.5e-158 562.8 469 64.0
TAR383G0243 Trochodendron aralioides HOM05D005548 ORTHO05D007497 4.3e-158 562.0 458 64.4
Dinv41607 Davidia involucrata HOM05D005548 ORTHO05D007497 7.3e-158 561.2 466 63.1
Potri.018G080900 Populus trichocarpa HOM05D005548 ORTHO05D007497 9.5e-158 560.8 473 62.2
MBI04_g22012_MAGBIO Magnolia biondii HOM05D005548 ORTHO05D007497 1.2e-157 560.5 453 63.6
arahy.Tifrunner.gnm1.ann1.HQIA7A Arachis hypogaea HOM05D005548 ORTHO05D007497 2.1e-157 559.7 412 67.7
CsaV3_1G024240 Cucumis sativus L. HOM05D005548 ORTHO05D007497 4.7e-157 558.5 436 65.1
Lalb_Chr22g0352791 Lupinus albus HOM05D005548 ORTHO05D007497 4.7e-157 558.5 420 67.4
PGSC0003DMG400000312 Solanum tuberosum HOM05D005548 ORTHO05D007497 1.1e-156 557.4 458 63.1
CiPaw.04G163600 Carya illinoinensis HOM05D005548 ORTHO05D007497 1.8e-156 556.6 471 63.3
Phvul.004G163700 Phaseolus vulgaris HOM05D005548 ORTHO05D007497 1.8e-156 556.6 426 66.2
Sc18g0001240 Simmondsia chinensis HOM05D005548 ORTHO05D007497 1.8e-156 556.6 471 60.5
Hund26198 Selenicereus undatus HOM05D005548 ORTHO05D007497 4.0e-156 555.4 468 63.0
Cc06_g09710 Coffea canephora HOM05D005548 ORTHO05D007497 6.8e-156 554.7 411 67.9
Aqoxy7G01651 Aquilegia oxysepala HOM05D005548 ORTHO05D007497 8.9e-156 554.3 456 62.9
Sopen12g003070 Solanum pennellii HOM05D005548 ORTHO05D007497 8.9e-156 554.3 458 62.4
Nitab4.5_0005947g0010 Nicotiana tabacum HOM05D005548 ORTHO05D007497 1.2e-155 553.9 460 62.6
Solyc12g007090.2 Solanum lycopersicum HOM05D005548 ORTHO05D007497 2.0e-155 553.1 458 62.4
Lj7C651T8 Lonicera japonica HOM05D005548 ORTHO05D007497 2.6e-155 552.7 393 69.0
Atru.chr7.1357 Acer truncatum HOM05D005548 ORTHO05D007497 5.8e-155 551.6 385 71.7
Sabra18G0068100 Salix brachista HOM05D005548 ORTHO05D007497 7.6e-155 551.2 467 62.3
COL.COLO4_34874 Corchorus olitorius HOM05D005548 ORTHO05D007497 9.9e-155 550.8 378 71.4
DCAR_010452 Daucus carota HOM05D005548 ORTHO05D007497 1.3e-154 550.4 461 62.3
MD02G1046200 Malus domestica HOM05D005548 ORTHO05D007497 3.7e-154 548.9 461 61.6
PSO832G1226 Papaver somniferum HOM05D005548 ORTHO05D007497 3.7e-154 548.9 399 67.7
CAN.G1529.9 Capsicum annuum HOM05D005548 ORTHO05D007497 8.4e-154 547.7 417 65.9
Nn2g11732 Nelumbo nucifera HOM05D005548 ORTHO05D007497 1.4e-153 547.0 445 62.7
PSO782G1908 Papaver somniferum HOM05D005548 ORTHO05D007497 2.4e-153 546.2 399 67.7
Actinidia20374 Actinidia chinensis HOM05D005548 ORTHO05D007497 3.2e-153 545.8 366 71.0
TWI63G0439 Tripterygium wilfordii HOM05D005548 ORTHO05D007497 3.2e-153 545.8 465 62.6
Prupe.7G231800 Prunus persica HOM05D005548 ORTHO05D007497 9.2e-153 544.3 449 62.4
HanXRQChr06g0179971 Helianthus annuus HOM05D005548 ORTHO05D007497 1.6e-152 543.5 393 69.0
Lsat_1_v5_gn_8_95001 Lactuca sativa HOM05D005548 ORTHO05D007497 3.5e-152 542.3 410 67.1
FAN19G0123 Fragaria x ananassa HOM05D005548 ORTHO05D007497 1.3e-151 540.4 451 62.7
FvH4_1g04721 Fragaria vesca HOM05D005548 ORTHO05D007497 3.0e-151 539.3 451 62.7
AUR62010987 Chenopodium quinoa HOM05D005548 ORTHO05D007497 4.3e-150 535.4 378 69.3
ECA233G4048 Erigeron canadensis HOM05D005548 ORTHO05D007497 4.3e-150 535.4 383 68.4
Migut.K00455 Erythranthe guttata HOM05D005548 ORTHO05D007497 7.3e-150 534.6 404 65.8
RcHm_v2.0_Chr2g0090331 Rosa chinensis HOM05D005548 ORTHO05D007497 1.2e-149 533.9 459 61.2
Ca_03976_v3 Cicer arietinum L. HOM05D005548 ORTHO05D007497 2.1e-149 533.1 405 66.2
ATR0315G003 Amborella trichopoda HOM05D005548 ORTHO05D007497 6.2e-149 531.6 401 66.3
Peaxi162Scf00546g00024 Petunia axillaris HOM05D005548 ORTHO05D007497 1.4e-148 530.4 418 64.4
TPR.G18453 Trifolium pratense HOM05D005548 ORTHO05D007497 1.8e-148 530.0 400 66.8
FAN23G0305 Fragaria x ananassa HOM05D005548 ORTHO05D007497 5.2e-148 528.5 403 66.5
FAN26G0240 Fragaria x ananassa HOM05D005548 ORTHO05D007497 1.5e-147 526.9 429 63.6
SGA_v2.0_scaffold307G48040 Striga asiatica HOM05D005548 ORTHO05D007497 1.5e-147 526.9 433 61.9
Psat1g042920 Pisum sativum HOM05D005548 ORTHO05D007497 2.6e-147 526.2 465 59.1
MSTRG.26421 Avicennia marina HOM05D005548 ORTHO05D007497 3.4e-147 525.8 402 64.9
CDE02G3701 Ceratophyllum demersum HOM05D005548 ORTHO05D007497 5.8e-147 525.0 452 61.1
Medtr6g088460 Medicago truncatula HOM05D005548 ORTHO05D007497 7.6e-147 524.6 448 60.7
SalBow1G6148 Salvia bowleyana HOM05D005548 ORTHO05D007497 2.9e-146 522.7 416 63.9
unitig_899.g15439 Utricularia gibba HOM05D005548 ORTHO05D007497 1.3e-143 513.8 391 65.2
Nitab4.5_0002904g0080 Nicotiana tabacum HOM05D005548 ORTHO05D007497 8.7e-143 511.1 460 59.6
MD15G1184300 Malus domestica HOM05D005548 ORTHO05D007497 1.5e-142 510.4 466 59.9
Duzib150G0071 Durio zibethinus HOM05D005548 ORTHO05D007497 2.9e-138 496.1 461 60.3
Os08g0387500 Oryza sativa ssp. japonica HOM05D005548 ORTHO05D007497 6.0e-136 488.4 389 62.2
Zm00001eb042080 Zea mays HOM05D005548 ORTHO05D007497 3.1e-132 476.1 385 61.3
vmacro20704 Vaccinium macrocarpon HOM05D005548 ORTHO05D007497 4.5e-131 472.2 445 56.4
SalBow1G2309 Salvia bowleyana HOM05D005548 ORTHO05D007497 6.9e-124 448.4 346 65.0
FAN28G1005 Fragaria x ananassa HOM05D005548 ORTHO05D007497 7.6e-123 444.9 389 62.0
Hma1.2p1_0518F.1_g171070 Hydrangea macrophylla HOM05D005548 ORTHO05D007497 7.6e-123 444.9 316 69.0
Rhsim01G0095300 Rhododendron simsii HOM05D005548 ORTHO05D007497 1.9e-118 430.3 460 49.1
HPP92_019989 Vanilla planifolia HOM05D005548 ORTHO05D004628 5.9e-107 392.1 371 55.5
Mapoly0115s0052 Marchantia polymorpha HOM05D005548 ORTHO05D007497 2.0e-102 377.1 391 51.4
Pp3c17_15530 Physcomitrium patens HOM05D005548 ORTHO05D007497 2.5e-102 376.7 382 51.6
Pp3c17_15540 Physcomitrium patens HOM05D005548 ORTHO05D007497 5.3e-100 369.0 388 51.3
AagrBONN_evm.TU.Sc2ySwM_344.3922 Anthoceros agrestis HOM05D005548 ORTHO05D007497 2.5e-97 360.1 399 47.1
AUR62021496 Chenopodium quinoa HOM05D005548 ORTHO05D007497 2.7e-96 356.7 260 68.1
SMO367G0640 Selaginella moellendorffii HOM05D005548 ORTHO05D007497 5.1e-95 352.4 387 50.4
SEGI_13755 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 2.6e-94 350.1 378 47.6
SEGI_11261 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 1.5e-81 307.8 323 47.7
CBR_g3024 Chara braunii HOM05D005548 ORTHO05D007497 5.2e-79 299.3 390 46.2
Rhsim01G0096400 Rhododendron simsii HOM05D005548 ORTHO05D007497 3.0e-63 246.9 339 39.2
AUR62021498 Chenopodium quinoa HOM05D005548 ORTHO05D007497 1.1e-47 195.3 138 66.7
Ciclev10010350m.g Citrus clementina HOM05D005548 ORTHO05D007497 2.9e-37 160.6 254 40.2
Nn8g39172 Nelumbo nucifera HOM05D005548 ORTHO05D007497 8.4e-37 159.1 113 69.0
Oeu048670.1 Olea europaea HOM05D005548 ORTHO05D007497 6.6e-34 149.4 100 67.0
SEGI_23308 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 2.3e-26 124.4 344 29.7
SEGI_35049 Sequoiadendron giganteum HOM05D005548 ORTHO05D007497 7.3e-25 119.4 258 32.6
CSS0042262 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 9.6e-25 119.0 129 52.7
CSS0016063 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 2.8e-24 117.5 129 52.7
MCO02G293 Micromonas commoda HOM05D005548 ORTHO05D007497 9.9e-22 109.0 352 28.1
CSS0021555 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.7e-21 108.2 72 73.6
Ah.12g056490 Amaranthus hybridus HOM05D005548 ORTHO05D007497 5.4e-20 103.2 83 65.1
Dinv06981 Davidia involucrata HOM05D005548 ORTHO05D045157 9.3e-20 102.4 81 61.7
arahy.Tifrunner.gnm1.ann1.VN1956 Arachis hypogaea HOM05D005548 ORTHO05D007497 4.3e-17 93.6 79 62.0
CSS0011769 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 5.3e-15 86.7 146 44.5
CSS0008633 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 9.3e-12 75.9 72 56.9
SalBow1G1492 Salvia bowleyana HOM05D005548 ORTHO05D007497 3.5e-11 73.9 53 66.0
CSS0008802 Camellia sinensis var. sinensis HOM05D005548 ORTHO05D007497 1.5e-09 68.6 137 40.1


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