Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p05480 Brassica napus HOM05D005571 ORTHO05D006919 2.8e-65 251.9 136 100.0
BraA02t05499Z Brassica rapa HOM05D005571 ORTHO05D006919 2.8e-65 251.9 136 100.0
BcaC03g13663 Brassica carinata HOM05D005571 ORTHO05D006919 1.2e-60 236.5 136 94.9
BNapus_Darmor_BZH_scaffold_38p02630 Brassica napus HOM05D005571 ORTHO05D006919 1.2e-60 236.5 136 94.9
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 3.7e-33 145.2 134 66.4
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 3.7e-33 145.2 134 66.4
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 8.2e-33 144.1 134 67.2
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 1.4e-32 143.3 134 67.2
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 1.8e-32 142.9 143 64.3
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 2.0e-31 139.4 135 66.7
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 3.2e-29 132.1 141 64.5
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 2.2e-25 119.4 137 56.9
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 1.8e-24 116.3 138 57.2
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 5.9e-23 111.3 141 57.4
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 1.1e-21 107.1 141 55.3
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 7.2e-21 104.4 145 51.0
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 9.4e-21 104.0 103 64.1
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 9.4e-21 104.0 103 64.1
BolC9t58559H Brassica oleracea HOM05D005571 ORTHO05D006919 9.4e-21 104.0 103 64.1
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 1.1e-16 90.5 142 51.4
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 2.0e-15 86.3 135 50.4
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 4.5e-15 85.1 115 55.7
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 1.4e-13 80.1 105 54.3
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 1.4e-11 73.6 114 47.4
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 1.8e-11 73.2 140 42.9
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 1.8e-11 73.2 104 47.1
A10p20370 Brassica napus HOM05D005571 ORTHO05D006919 2.3e-11 72.8 132 47.0
BraA10t44107Z Brassica rapa HOM05D005571 ORTHO05D006919 3.0e-11 72.4 108 50.9
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 3.0e-11 72.4 100 50.0
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 5.1e-11 71.6 104 49.0
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 6.7e-11 71.2 110 46.4
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 1.5e-10 70.1 106 47.2
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 1.5e-10 70.1 113 46.9
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 1.5e-10 70.1 140 42.1
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 1.5e-10 70.1 150 41.3
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 1.5e-10 70.1 157 39.5
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 2.0e-10 69.7 110 41.8
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 2.6e-10 69.3 89 55.1
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 3.3e-10 68.9 107 45.8
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 4.4e-10 68.6 98 49.0
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 5.7e-10 68.2 93 51.6
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 7.4e-10 67.8 93 49.5
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 9.7e-10 67.4 87 50.6
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 9.7e-10 67.4 120 45.0
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 1.3e-09 67.0 101 47.5
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 1.3e-09 67.0 128 40.6
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 1.3e-09 67.0 119 47.9
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 1.7e-09 66.6 152 38.8
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.7e-09 66.6 98 49.0
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 1.7e-09 66.6 105 46.7
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 1.7e-09 66.6 124 47.6
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 1.7e-09 66.6 113 46.9
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 2.2e-09 66.2 110 44.5
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 2.2e-09 66.2 103 51.5
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 2.2e-09 66.2 102 48.0
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 2.8e-09 65.9 117 43.6
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 2.8e-09 65.9 84 51.2
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 8.2e-09 64.3 127 42.5
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 8.2e-09 64.3 114 45.6
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 8.2e-09 64.3 143 39.9
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 1.1e-08 63.9 116 44.0
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 1.1e-08 63.9 88 43.2
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 1.4e-08 63.5 108 45.4
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 1.8e-08 63.2 128 39.8
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 1.8e-08 63.2 140 37.1
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 1.8e-08 63.2 114 42.1
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 2.4e-08 62.8 107 43.0
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 2.4e-08 62.8 111 43.2
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 2.4e-08 62.8 113 44.2
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 3.1e-08 62.4 108 45.4
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 3.1e-08 62.4 116 42.2
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 4.1e-08 62.0 114 42.1
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 4.1e-08 62.0 96 46.9
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 4.1e-08 62.0 87 51.7
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 5.3e-08 61.6 97 46.4
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 5.3e-08 61.6 91 47.3
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 7.0e-08 61.2 110 47.3
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 1.5e-07 60.1 92 45.7
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 1.5e-07 60.1 108 44.4
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 2.0e-07 59.7 126 42.1
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 2.0e-07 59.7 115 43.5
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 2.6e-07 59.3 98 45.9
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 3.4e-07 58.9 130 38.5
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 4.5e-07 58.5 109 41.3
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 4.5e-07 58.5 87 46.0
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 5.9e-07 58.2 102 44.1
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 5.9e-07 58.2 114 41.2
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 7.7e-07 57.8 50 62.0
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 7.7e-07 57.8 97 46.4
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 1.3e-06 57.0 119 42.9
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 1.7e-06 56.6 118 38.1
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 2.2e-06 56.2 103 39.8
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 2.9e-06 55.8 105 41.0
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 2.9e-06 55.8 120 39.2
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 3.8e-06 55.5 97 42.3
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 3.8e-06 55.5 115 42.6
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 8.5e-06 54.3 117 40.2
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 8.5e-06 54.3 117 40.2


User provided reference genes

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