Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p04750 Brassica napus HOM05D003715 ORTHO05D003958 8.7e-159 563.5 275 100.0
BolC2t06880H Brassica oleracea HOM05D003715 ORTHO05D003958 1.8e-140 502.7 275 89.8
C02p09710 Brassica napus HOM05D003715 ORTHO05D003958 4.1e-140 501.5 275 89.1
BraA02t05434Z Brassica rapa HOM05D003715 ORTHO05D003958 2.6e-139 498.8 275 90.2
BcaC03g13579 Brassica carinata HOM05D003715 ORTHO05D003958 1.3e-138 496.5 275 88.4
Sp6g26180 Schrenkiella parvula HOM05D003715 ORTHO05D003958 1.5e-129 466.5 280 82.1
BcaB05g23302 Brassica carinata HOM05D003715 ORTHO05D003958 1.9e-129 466.1 274 82.8
A10p21370 Brassica napus HOM05D003715 ORTHO05D003958 1.6e-123 446.4 275 77.8
C09p58840 Brassica napus HOM05D003715 ORTHO05D003958 3.2e-121 438.7 276 77.2
Thhalv10014292m.g Eutrema salsugineum HOM05D003715 ORTHO05D003958 1.0e-119 433.7 285 75.8
BraA10t44200Z Brassica rapa HOM05D003715 ORTHO05D003958 7.5e-118 427.6 258 78.3
BolC9t58728H Brassica oleracea HOM05D003715 ORTHO05D003958 9.8e-118 427.2 271 76.8
A03p08670 Brassica napus HOM05D003715 ORTHO05D003958 5.0e-114 414.8 275 76.4
BcaB01g06399 Brassica carinata HOM05D003715 ORTHO05D003958 9.4e-113 410.6 272 73.9
BolC3t13497H Brassica oleracea HOM05D003715 ORTHO05D003958 7.7e-107 391.0 274 72.3
BcaB01g05177 Brassica carinata HOM05D003715 ORTHO05D003958 2.9e-106 389.0 274 71.9
C03p10110 Brassica napus HOM05D003715 ORTHO05D003958 2.9e-106 389.0 274 71.9
BraA03t10190Z Brassica rapa HOM05D003715 ORTHO05D003958 2.9e-106 389.0 274 71.9
AT5G18130 Arabidopsis thaliana HOM05D003715 ORTHO05D003958 4.4e-102 375.2 284 70.1
AL6G29330 Arabidopsis lyrata HOM05D003715 ORTHO05D003958 1.3e-101 373.6 285 70.2
Carub.0006s1642 Capsella rubella HOM05D003715 ORTHO05D003958 3.9e-90 335.5 284 64.1
BcaB08g36703 Brassica carinata HOM05D003715 ORTHO05D003958 2.3e-87 326.2 276 62.0
CARHR194940 Cardamine hirsuta HOM05D003715 ORTHO05D003958 4.0e-87 325.5 297 62.3
AL3G13760 Arabidopsis lyrata HOM05D003715 ORTHO05D003958 1.5e-70 270.4 285 54.0
AT3G03870 Arabidopsis thaliana HOM05D003715 ORTHO05D003958 1.3e-69 267.3 289 54.0
Carub.0003s0306 Capsella rubella HOM05D003715 ORTHO05D003958 1.1e-68 264.2 286 52.4
BcaNung05741 Brassica carinata HOM05D003715 ORTHO05D003958 3.9e-66 255.8 276 52.2
CARHR077990 Cardamine hirsuta HOM05D003715 ORTHO05D003958 1.9e-65 253.4 279 52.3
A05p43520 Brassica napus HOM05D003715 ORTHO05D003958 4.3e-65 252.3 280 53.2
BraA05t23092Z Brassica rapa HOM05D003715 ORTHO05D003958 5.6e-65 251.9 276 53.3
Sp3g02840 Schrenkiella parvula HOM05D003715 ORTHO05D003958 9.6e-65 251.1 279 52.3
Thhalv10021350m.g Eutrema salsugineum HOM05D003715 ORTHO05D003958 2.1e-64 250.0 285 49.5
BcaC05g29901 Brassica carinata HOM05D003715 ORTHO05D003958 5.8e-62 241.9 280 51.1
BolC5t34973H Brassica oleracea HOM05D003715 ORTHO05D003958 5.8e-62 241.9 280 51.1
BcaC05g30247 Brassica carinata HOM05D003715 ORTHO05D003958 1.3e-61 240.7 285 50.5
BolC1t05801H Brassica oleracea HOM05D003715 ORTHO05D003958 5.4e-60 235.3 285 49.5
THA.LOC104820776 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 1.6e-59 233.8 308 48.7
Aa31LG11G11470 Aethionema arabicum HOM05D003715 ORTHO05D003958 3.8e-53 212.6 279 47.3
THA.LOC104827275 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 4.5e-46 189.1 270 44.1
Aa31LG5G14450 Aethionema arabicum HOM05D003715 ORTHO05D003958 6.5e-45 185.3 285 43.5
BcaC05g30288 Brassica carinata HOM05D003715 ORTHO05D003958 8.4e-45 184.9 231 47.2
THA.LOC104802870 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 1.4e-44 184.1 287 44.6
BcaC03g13578 Brassica carinata HOM05D003715 ORTHO05D003958 2.1e-43 180.3 94 89.4
Manes.09G140500 Manihot esculenta HOM05D003715 ORTHO05D003958 3.3e-41 172.9 301 40.2
Sabra19G0044200 Salix brachista HOM05D003715 ORTHO05D003958 7.4e-41 171.8 314 38.9
Sabra19G0047500 Salix brachista HOM05D003715 ORTHO05D003958 7.4e-41 171.8 314 38.9
Manes.08G145000 Manihot esculenta HOM05D003715 ORTHO05D003958 9.0e-39 164.9 302 36.4
Potri.019G035600 Populus trichocarpa HOM05D003715 ORTHO05D003958 1.2e-38 164.5 315 38.4
Potri.013G057200 Populus trichocarpa HOM05D003715 ORTHO05D003958 3.4e-38 162.9 317 40.1
Cfa001533 Carpinus fangiana HOM05D003715 ORTHO05D003958 4.2e-36 156.0 303 38.9
QL07p018445 Quercus lobata HOM05D003715 ORTHO05D003958 5.5e-36 155.6 313 39.3
Haze_19430 Corylus avellana HOM05D003715 ORTHO05D003958 2.1e-35 153.7 311 37.3
Hma1.2p1_0152F.1_g067600 Hydrangea macrophylla HOM05D003715 ORTHO05D003958 7.9e-35 151.8 298 35.6
Sabra13G0051000 Salix brachista HOM05D003715 ORTHO05D003958 5.7e-33 145.6 313 38.0
TWI32G0411 Tripterygium wilfordii HOM05D003715 ORTHO05D003958 9.7e-33 144.8 307 37.5
TWI34G1349 Tripterygium wilfordii HOM05D003715 ORTHO05D003958 2.8e-32 143.3 314 37.3
Actinidia22080 Actinidia chinensis HOM05D003715 ORTHO05D003958 6.3e-32 142.1 305 34.4
Ciclev10021362m.g Citrus clementina HOM05D003715 ORTHO05D003958 1.8e-31 140.6 312 34.6
Nitab4.5_0002769g0040 Nicotiana tabacum HOM05D003715 ORTHO05D003958 2.4e-31 140.2 289 36.0
Solyc10g078590.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 2.4e-31 140.2 288 36.1
MSTRG.26069 Avicennia marina HOM05D003715 ORTHO05D003958 6.9e-31 138.7 291 34.7
Ca_04486_v3 Cicer arietinum L. HOM05D003715 ORTHO05D003958 6.9e-31 138.7 273 36.6
Sopen10g029220 Solanum pennellii HOM05D003715 ORTHO05D003958 9.0e-31 138.3 288 35.8
Nn2g12054 Nelumbo nucifera HOM05D003715 ORTHO05D003958 1.5e-30 137.5 285 33.3
TAR623G0055 Trochodendron aralioides HOM05D003715 ORTHO05D003958 2.0e-30 137.1 311 32.5
Atru.chr2.1400 Acer truncatum HOM05D003715 ORTHO05D003958 2.6e-30 136.7 306 34.0
Dinv37021 Davidia involucrata HOM05D003715 ORTHO05D003958 3.4e-30 136.3 301 36.5
Eucgr.A02102 Eucalyptus grandis HOM05D003715 ORTHO05D003958 3.4e-30 136.3 304 36.2
PSO781G0019 Papaver somniferum HOM05D003715 ORTHO05D003958 3.4e-30 136.3 283 32.5
PGR042G0616 Punica granatum HOM05D003715 ORTHO05D003958 3.4e-30 136.3 287 34.8
Ca_08274_v3 Cicer arietinum L. HOM05D003715 ORTHO05D003958 4.5e-30 136.0 282 37.9
PGSC0003DMG400008354 Solanum tuberosum HOM05D003715 ORTHO05D003958 4.5e-30 136.0 289 36.0
Prupe.7G006100 Prunus persica HOM05D003715 ORTHO05D003958 7.7e-30 135.2 313 33.5
CiPaw.10G001300 Carya illinoinensis HOM05D003715 ORTHO05D003958 2.9e-29 133.3 312 34.6
Psat3g088760 Pisum sativum HOM05D003715 ORTHO05D003958 5.0e-29 132.5 275 36.7
PGR142G1981 Punica granatum HOM05D003715 ORTHO05D003958 1.9e-28 130.6 307 35.8
Sc13g0002630 Simmondsia chinensis HOM05D003715 ORTHO05D003958 1.9e-28 130.6 300 35.0
MD14G1003600 Malus domestica HOM05D003715 ORTHO05D003958 2.5e-28 130.2 302 32.8
MBI01_g25640_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 3.2e-28 129.8 322 32.9
Glyma.16G153700 Glycine max HOM05D003715 ORTHO05D003958 5.5e-28 129.0 292 36.3
TPR.G5870 Trifolium pratense HOM05D003715 ORTHO05D003958 1.2e-27 127.9 296 35.8
Glyma.02G072500 Glycine max HOM05D003715 ORTHO05D003958 1.6e-27 127.5 293 35.8
TPR.G9142 Trifolium pratense HOM05D003715 ORTHO05D003958 1.6e-27 127.5 275 34.9
Dinv14575 Davidia involucrata HOM05D003715 ORTHO05D003958 2.1e-27 127.1 292 32.9
Peaxi162Scf00463g00019 Petunia axillaris HOM05D003715 ORTHO05D003958 2.7e-27 126.7 304 31.9
MD12G1005100 Malus domestica HOM05D003715 ORTHO05D003958 3.6e-27 126.3 306 33.3
Oeu024502.1 Olea europaea HOM05D003715 ORTHO05D003958 3.6e-27 126.3 294 32.7
VMungo0464G1653 Vigna mungo HOM05D003715 ORTHO05D003958 3.6e-27 126.3 299 34.4
arahy.Tifrunner.gnm1.ann1.V3MY1S Arachis hypogaea HOM05D003715 ORTHO05D003958 4.6e-27 125.9 274 34.7
EL10Ac3g06828 Beta vulgaris HOM05D003715 ORTHO05D003958 6.1e-27 125.6 297 33.7
Medtr7g085790 Medicago truncatula HOM05D003715 ORTHO05D003958 6.1e-27 125.6 282 34.8
PSO339G5928 Papaver somniferum HOM05D003715 ORTHO05D003958 6.1e-27 125.6 296 32.8
FvH4_1g28230 Fragaria vesca HOM05D003715 ORTHO05D003958 1.0e-26 124.8 295 33.9
PSO384G3755 Papaver somniferum HOM05D003715 ORTHO05D003958 1.0e-26 124.8 300 31.0
FAN23G0877 Fragaria x ananassa HOM05D003715 ORTHO05D003958 1.8e-26 124.0 293 34.5
Actinidia30549 Actinidia chinensis HOM05D003715 ORTHO05D003958 3.0e-26 123.2 248 37.9
Sed0002226 Sechium edule HOM05D003715 ORTHO05D003958 3.0e-26 123.2 312 32.4
CsaV3_4G013240 Cucumis sativus L. HOM05D003715 ORTHO05D003958 3.9e-26 122.9 318 32.1
MBI04_g28023_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 3.9e-26 122.9 297 34.3
DCAR_019875 Daucus carota HOM05D003715 ORTHO05D003958 8.8e-26 121.7 298 30.5
FAN26G1768 Fragaria x ananassa HOM05D003715 ORTHO05D003958 8.8e-26 121.7 296 35.1
COL.COLO4_36085 Corchorus olitorius HOM05D003715 ORTHO05D003958 1.1e-25 121.3 189 43.4
Gorai.007G262000 Gossypium raimondii HOM05D003715 ORTHO05D003958 1.1e-25 121.3 301 34.9
Hund19231 Selenicereus undatus HOM05D003715 ORTHO05D003958 1.1e-25 121.3 291 33.7
MELO3C008806.2 Cucumis melo HOM05D003715 ORTHO05D003958 1.5e-25 120.9 315 31.7
RcHm_v2.0_Chr3g0497011 Rosa chinensis HOM05D003715 ORTHO05D003958 2.0e-25 120.6 318 31.8
Nitab4.5_0000358g0150 Nicotiana tabacum HOM05D003715 ORTHO05D003958 2.5e-25 120.2 284 34.9
Gohir.A11G235300 Gossypium hirsutum HOM05D003715 ORTHO05D003958 4.3e-25 119.4 299 33.8
Medtr6g029250 Medicago truncatula HOM05D003715 ORTHO05D003958 4.3e-25 119.4 275 34.2
Nitab4.5_0000658g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 4.3e-25 119.4 311 32.2
Lalb_Chr22g0359081 Lupinus albus HOM05D003715 ORTHO05D003958 5.7e-25 119.0 291 33.3
vmacro12564 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 5.7e-25 119.0 296 32.4
Phvul.004G080700 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 7.4e-25 118.6 295 33.6
Thecc.05G249800 Theobroma cacao HOM05D003715 ORTHO05D003958 7.4e-25 118.6 304 31.9
Lalb_Chr02g0157161 Lupinus albus HOM05D003715 ORTHO05D003958 9.7e-25 118.2 280 33.9
Oeu035703.1 Olea europaea HOM05D003715 ORTHO05D003958 9.7e-25 118.2 295 32.9
Aqoxy2G00514 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 1.3e-24 117.9 278 34.5
Peaxi162Scf00003g04827 Petunia axillaris HOM05D003715 ORTHO05D003958 1.3e-24 117.9 278 34.2
Phvul.001G111500 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 1.3e-24 117.9 291 33.0
FAN28G3019 Fragaria x ananassa HOM05D003715 ORTHO05D003958 1.7e-24 117.5 295 33.6
ClCG04G005350 Citrullus lanatus HOM05D003715 ORTHO05D003958 2.2e-24 117.1 305 31.8
SGA_v2.0_scaffold94G28404 Striga asiatica HOM05D003715 ORTHO05D003958 2.8e-24 116.7 278 33.1
Gohir.D11G246200 Gossypium hirsutum HOM05D003715 ORTHO05D003958 3.7e-24 116.3 301 34.2
Psat1g091040 Pisum sativum HOM05D003715 ORTHO05D003958 6.3e-24 115.5 275 33.1
Lj1g0012553 Lotus japonicus HOM05D003715 ORTHO05D003958 4.1e-23 112.8 300 33.7
Glyma.16G040300 Glycine max HOM05D003715 ORTHO05D003958 5.3e-23 112.5 290 32.8
CANSAT78G1806 Cannabis sativa HOM05D003715 ORTHO05D003958 9.1e-23 111.7 314 31.5
Lalb_Chr14g0364551 Lupinus albus HOM05D003715 ORTHO05D003958 1.2e-22 111.3 282 33.3
Eucgr.K01502 Eucalyptus grandis HOM05D003715 ORTHO05D003958 1.5e-22 110.9 286 33.2
Sed0021221 Sechium edule HOM05D003715 ORTHO05D003958 1.5e-22 110.9 293 30.7
Lj1g0002462 Lotus japonicus HOM05D003715 ORTHO05D003958 2.6e-22 110.2 287 35.2
Lsat_1_v5_gn_6_37461 Lactuca sativa HOM05D003715 ORTHO05D003958 4.5e-22 109.4 279 30.8
Cpa.g.sc51.130 Carica papaya HOM05D003715 ORTHO05D003958 7.7e-22 108.6 299 29.8
MBI04_g47731_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 7.7e-22 108.6 190 39.5
Glyma.19G112800 Glycine max HOM05D003715 ORTHO05D003958 1.7e-21 107.5 293 31.4
Duzib106G1922 Durio zibethinus HOM05D003715 ORTHO05D003958 2.2e-21 107.1 311 31.2
Nitab4.5_0000394g0140 Nicotiana tabacum HOM05D003715 ORTHO05D003958 6.5e-21 105.5 300 31.3
Cc06_g23060 Coffea canephora HOM05D003715 ORTHO05D003958 8.5e-21 105.1 168 40.5
HanXRQChr14g0438161 Helianthus annuus HOM05D003715 ORTHO05D003958 8.5e-21 105.1 296 32.4
Rhsim04G0091400 Rhododendron simsii HOM05D006013 ORTHO05D007383 1.1e-20 104.8 247 34.8
CDE02G4343 Ceratophyllum demersum HOM05D003715 ORTHO05D003958 2.5e-20 103.6 300 31.3
TAR633G2492 Trochodendron aralioides HOM05D003715 ORTHO05D003958 3.6e-19 99.8 299 28.8
MBI04_g37012_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 4.7e-19 99.4 180 40.0
VMungo1383G2890 Vigna mungo HOM05D003715 ORTHO05D003958 7.9e-19 98.6 295 30.8
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 1.0e-18 98.2 230 29.6
arahy.Tifrunner.gnm1.ann1.KTU7AY Arachis hypogaea HOM05D003715 ORTHO05D003958 1.4e-18 97.8 102 48.0
ECA238G2879 Erigeron canadensis HOM05D003715 ORTHO05D003958 3.0e-18 96.7 292 30.8
CiPaw.09G002400 Carya illinoinensis HOM05D003715 ORTHO05D003958 5.1e-18 95.9 274 31.4
ATR0737G080 Amborella trichopoda HOM05D003715 ORTHO05D003958 1.5e-17 94.4 308 29.5
HanXRQChr02g0054571 Helianthus annuus HOM05D003715 ORTHO05D003958 2.0e-17 94.0 288 29.2
SalBow1G3164 Salvia bowleyana HOM05D003715 ORTHO05D003958 2.0e-17 94.0 278 30.2
TAR369G0375 Trochodendron aralioides HOM05D003715 ORTHO05D003958 5.7e-17 92.4 259 27.8
Nn7g35866 Nelumbo nucifera HOM05D003715 ORTHO05D003958 1.7e-16 90.9 293 28.3
Aqoxy1G00472 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 2.8e-16 90.1 295 29.8
CSS0027479 Camellia sinensis var. sinensis HOM05D003715 ORTHO05D003958 2.8e-16 90.1 97 50.5
ECA233G0839 Erigeron canadensis HOM05D003715 ORTHO05D003958 2.8e-16 90.1 292 28.1
CDE05G3048 Ceratophyllum demersum HOM05D003715 ORTHO05D003958 3.7e-16 89.7 284 31.0
Solyc10g080670.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 4.8e-16 89.4 267 31.1
FAN19G0160 Fragaria x ananassa HOM05D003715 ORTHO05D003958 1.4e-15 87.8 273 31.9
Sopen10g031210 Solanum pennellii HOM05D003715 ORTHO05D003958 1.8e-15 87.4 267 30.3
vmacro09135 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 1.8e-15 87.4 249 33.3
Ah.04g153150 Amaranthus hybridus HOM05D003715 ORTHO05D003958 3.1e-15 86.7 282 28.4
HanXRQChr13g0397871 Helianthus annuus HOM05D003715 ORTHO05D003958 1.2e-14 84.7 282 26.2
Os03g0806600 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 1.2e-14 84.7 179 33.0
Duzib128G0041 Durio zibethinus HOM05D003715 ORTHO05D003958 1.3e-13 81.3 183 32.8
AUR62032710 Chenopodium quinoa HOM05D003715 ORTHO05D003958 1.7e-13 80.9 283 28.3
Nitab4.5_0001079g0120 Nicotiana tabacum HOM05D003715 ORTHO05D003958 3.8e-13 79.7 267 26.6
AUR62032043 Chenopodium quinoa HOM05D003715 ORTHO05D003958 6.5e-13 79.0 283 27.9
Zm00001eb302900 Zea mays HOM05D003715 ORTHO05D003958 8.5e-13 78.6 93 46.2
arahy.Tifrunner.gnm1.ann1.85Z4HY Arachis hypogaea HOM05D003715 ORTHO05D003958 5.5e-12 75.9 274 27.0
Nitab4.5_0009367g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 5.5e-12 75.9 164 29.9
Os07g0204100 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 9.4e-12 75.1 91 47.3
Actinidia38611 Actinidia chinensis HOM05D003715 ORTHO05D003958 1.2e-11 74.7 268 29.5
PSO384G3057 Papaver somniferum HOM05D003715 ORTHO05D003958 2.1e-11 73.9 156 30.8
arahy.Tifrunner.gnm1.ann1.FCYU2S Arachis hypogaea HOM05D003715 ORTHO05D003958 4.7e-11 72.8 181 29.8
SEGI_20586 Sequoiadendron giganteum HOM05D003715 ORTHO05D003958 1.1e-09 68.2 112 40.2
VMungo1383G0996 Vigna mungo HOM05D002467 ORTHO05D013374 1.1e-09 68.2 73 49.3
PGSC0003DMG400023700 Solanum tuberosum HOM05D003715 ORTHO05D003958 1.3e-08 64.7 270 26.7
Lsat_1_v5_gn_2_58261 Lactuca sativa HOM05D003715 ORTHO05D003958 2.2e-08 63.9 259 30.9
PSO782G0808 Papaver somniferum HOM05D003715 ORTHO05D003958 1.1e-07 61.6 142 31.0
HPP92_014229 Vanilla planifolia HOM05D035551 ORTHO05D003958 1.4e-07 61.2 188 30.3
unitig_0.g211 Utricularia gibba HOM05D003715 ORTHO05D003958 1.8e-07 60.8 274 26.3
Peaxi162Scf00249g00717 Petunia axillaris HOM05D003715 ORTHO05D003958 7.7e-06 55.5 201 29.4


User provided reference genes

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