Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p04550 Brassica napus HOM05D006906 ORTHO05D008578 5.6e-53 210.7 107 100.0
BraA02t05416Z Brassica rapa HOM05D006906 ORTHO05D008578 2.9e-49 198.4 107 95.3
BolC2t06848H Brassica oleracea HOM05D006906 ORTHO05D008578 1.7e-46 189.1 107 90.7
BcaB08g36735 Brassica carinata HOM05D006906 ORTHO05D008578 1.5e-45 186.0 106 86.8
BolC9t58765H Brassica oleracea HOM05D006906 ORTHO05D008578 2.5e-45 185.3 111 85.6
BcaC04g18752 Brassica carinata HOM05D006906 ORTHO05D008578 4.3e-45 184.5 111 85.6
C09p59250 Brassica napus HOM05D006906 ORTHO05D008578 5.6e-45 184.1 111 84.7
BcaC03g13555 Brassica carinata HOM05D006906 ORTHO05D008578 9.5e-45 183.3 107 88.8
Thhalv10015071m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 9.5e-45 183.3 108 86.1
Sp6g26380 Schrenkiella parvula HOM05D006906 ORTHO05D008578 9.5e-45 183.3 112 86.6
AT5G17870 Arabidopsis thaliana HOM05D006906 ORTHO05D008578 1.2e-44 183.0 105 87.6
BcaB01g05160 Brassica carinata HOM05D006906 ORTHO05D008578 2.1e-44 182.2 113 85.0
BolC3t13482H Brassica oleracea HOM05D006906 ORTHO05D008578 2.1e-44 182.2 113 85.0
C03p09940 Brassica napus HOM05D006906 ORTHO05D008578 2.8e-44 181.8 109 87.2
BraA03t10177Z Brassica rapa HOM05D006906 ORTHO05D008578 3.6e-44 181.4 110 86.4
BcaB01g04920 Brassica carinata HOM05D006906 ORTHO05D008578 1.4e-43 179.5 113 82.3
BraA10t44222Z Brassica rapa HOM05D006906 ORTHO05D008578 3.1e-43 178.3 111 82.0
A10p21600 Brassica napus HOM05D006906 ORTHO05D008578 6.8e-43 177.2 111 82.0
AL6G28970 Arabidopsis lyrata HOM05D006906 ORTHO05D008578 5.8e-42 174.1 107 82.2
CARHR195300 Cardamine hirsuta HOM05D006906 ORTHO05D008578 4.9e-41 171.0 108 80.6
Carub.0006s1610 Capsella rubella HOM05D006906 ORTHO05D008578 8.4e-41 170.2 108 81.5
BcaC04g18751 Brassica carinata HOM05D006906 ORTHO05D008578 1.2e-39 166.4 107 82.2
C09p59230 Brassica napus HOM05D006906 ORTHO05D008578 1.2e-39 166.4 107 82.2
Aa31LG11G11710 Aethionema arabicum HOM05D006906 ORTHO05D008578 3.6e-36 154.8 107 76.6
BolC9t58763H Brassica oleracea HOM05D006906 ORTHO05D008578 3.4e-34 148.3 90 85.6
A03p08530 Brassica napus HOM05D006906 ORTHO05D008578 5.1e-30 134.4 113 69.0
BcaB05g23287 Brassica carinata HOM05D006906 ORTHO05D008578 9.6e-29 130.2 107 70.1
Manes.18G052450 Manihot esculenta HOM05D006906 ORTHO05D008578 4.9e-25 117.9 106 59.4
THA.LOC104806946 Tarenaya hassleriana HOM05D006906 ORTHO05D008578 1.9e-24 115.9 107 57.9
Potri.002G112500 Populus trichocarpa HOM05D006906 ORTHO05D008578 5.4e-24 114.4 98 61.2
Prupe.1G543500 Prunus persica HOM05D006906 ORTHO05D008578 9.3e-24 113.6 104 56.7
Sabra02G0088700 Salix brachista HOM05D006906 ORTHO05D008578 1.2e-23 113.2 109 58.7
CSS0004987 Camellia sinensis var. sinensis HOM05D006906 ORTHO05D008578 1.6e-23 112.8 97 57.7
Actinidia19594 Actinidia chinensis HOM05D006906 ORTHO05D008578 2.1e-23 112.5 112 56.2
Cfa020715 Carpinus fangiana HOM05D006906 ORTHO05D008578 2.1e-23 112.5 108 55.6
MD08G1211600 Malus domestica HOM05D006906 ORTHO05D008578 7.9e-23 110.5 111 53.2
Thhalv10009816m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 1.3e-22 109.8 69 79.7
vmacro04612 Vaccinium macrocarpon HOM05D006906 ORTHO05D008578 2.3e-22 109.0 89 59.6
Haze_19024 Corylus avellana HOM05D006906 ORTHO05D008578 3.0e-22 108.6 97 56.7
Ah.05g166860 Amaranthus hybridus HOM05D006906 ORTHO05D008578 3.9e-22 108.2 108 54.6
CiPaw.15G153800 Carya illinoinensis HOM05D006906 ORTHO05D008578 3.9e-22 108.2 97 58.8
SGA_v2.0_scaffold152G36871 Striga asiatica HOM05D006906 ORTHO05D008578 5.1e-22 107.8 101 60.4
Rhsim07G0215600 Rhododendron simsii HOM05D006906 ORTHO05D008578 6.7e-22 107.5 91 60.4
EL10Ac1g02326 Beta vulgaris HOM05D006906 ORTHO05D008578 8.7e-22 107.1 90 62.2
Dinv01221 Davidia involucrata HOM05D006906 ORTHO05D008578 1.5e-21 106.3 104 55.8
RcHm_v2.0_Chr7g0232161 Rosa chinensis HOM05D006906 ORTHO05D008578 1.5e-21 106.3 104 58.7
CANSAT01G2303 Cannabis sativa HOM05D006906 ORTHO05D008578 1.9e-21 105.9 109 54.1
QL12p040639 Quercus lobata HOM05D006906 ORTHO05D008578 3.3e-21 105.1 118 51.7
Hma1.2p1_1068F.1_g254010 Hydrangea macrophylla HOM05D006906 ORTHO05D008578 4.3e-21 104.8 104 54.8
Aqoxy6G01513 Aquilegia oxysepala HOM05D006906 ORTHO05D008578 5.6e-21 104.4 86 62.8
MD15G1394500 Malus domestica HOM05D006906 ORTHO05D008578 5.6e-21 104.4 110 52.7
TAR628G1359 Trochodendron aralioides HOM05D006906 ORTHO05D008578 7.4e-21 104.0 104 53.8
Sc26g0004280 Simmondsia chinensis HOM05D006906 ORTHO05D008578 1.6e-20 102.8 94 60.6
Ciclev10002778m.g Citrus clementina HOM05D006906 ORTHO05D008578 2.1e-20 102.4 108 52.8
HanXRQChr16g0510751 Helianthus annuus HOM05D006906 ORTHO05D008578 2.1e-20 102.4 83 62.7
HanXRQChr16g0510761 Helianthus annuus HOM05D006906 ORTHO05D008578 2.1e-20 102.4 83 62.7
FvH4_5g33440 Fragaria vesca HOM05D006906 ORTHO05D008578 2.8e-20 102.1 104 57.7
FAN18G0347 Fragaria x ananassa HOM05D006906 ORTHO05D008578 2.8e-20 102.1 104 57.7
Eucgr.F00111 Eucalyptus grandis HOM05D006906 ORTHO05D008578 3.7e-20 101.7 94 56.4
Atru.chr13.910 Acer truncatum HOM05D006906 ORTHO05D008578 4.8e-20 101.3 106 53.8
FAN08G0950 Fragaria x ananassa HOM05D006906 ORTHO05D008578 8.1e-20 100.5 79 65.8
PGR031G1810 Punica granatum HOM05D006906 ORTHO05D008578 8.1e-20 100.5 95 60.0
Duzib116G0588 Durio zibethinus HOM05D006906 ORTHO05D008578 1.4e-19 99.8 76 64.5
Duzib116G0218 Durio zibethinus HOM05D006906 ORTHO05D008578 1.8e-19 99.4 66 68.2
AUR62034964 Chenopodium quinoa HOM05D006906 ORTHO05D008578 4.0e-19 98.2 90 53.3
DCAR_012832 Daucus carota HOM05D006906 ORTHO05D008578 4.0e-19 98.2 109 52.3
Thecc.08G080900 Theobroma cacao HOM05D006906 ORTHO05D008578 4.0e-19 98.2 94 51.1
ClCG11G014950 Citrullus lanatus HOM05D006906 ORTHO05D008578 5.3e-19 97.8 106 50.9
MBI16_g41120_MAGBIO Magnolia biondii HOM05D006906 ORTHO05D008578 6.9e-19 97.4 105 50.5
Prupe.3G080900 Prunus persica HOM05D006906 ORTHO05D008578 6.9e-19 97.4 65 67.7
Glyma.06G089700 Glycine max HOM05D006906 ORTHO05D008578 9.0e-19 97.1 92 56.5
Phvul.009G113500 Phaseolus vulgaris HOM05D006906 ORTHO05D008578 1.2e-18 96.7 96 55.2
Sed0015154 Sechium edule HOM05D006906 ORTHO05D008578 1.2e-18 96.7 106 50.9
Cpa.g.sc160.12 Carica papaya HOM05D006906 ORTHO05D008578 1.5e-18 96.3 90 55.6
MSTRG.17420 Avicennia marina HOM05D006906 ORTHO05D008578 2.0e-18 95.9 99 58.6
CDE01G0046 Ceratophyllum demersum HOM05D006906 ORTHO05D008578 2.0e-18 95.9 66 71.2
Duzib093G2206 Durio zibethinus HOM05D006906 ORTHO05D008578 2.0e-18 95.9 83 57.8
TWI56G0746 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 2.6e-18 95.5 111 46.8
Gohir.A05G213900 Gossypium hirsutum HOM05D006906 ORTHO05D008578 3.4e-18 95.1 63 68.3
Gorai.009G224100 Gossypium raimondii HOM05D006906 ORTHO05D008578 3.4e-18 95.1 66 66.7
ECA246G4410 Erigeron canadensis HOM05D006906 ORTHO05D008578 4.5e-18 94.7 120 47.5
MELO3C003483.2 Cucumis melo HOM05D006906 ORTHO05D008578 5.8e-18 94.4 83 56.6
Lsat_1_v5_gn_6_108161 Lactuca sativa HOM05D006906 ORTHO05D008578 9.9e-18 93.6 111 49.5
Sopen04g030750 Solanum pennellii HOM05D006906 ORTHO05D008578 9.9e-18 93.6 113 49.6
PGSC0003DMG400004936 Solanum tuberosum HOM05D006906 ORTHO05D008578 9.9e-18 93.6 112 50.9
CAN.G416.50 Capsicum annuum HOM05D006906 ORTHO05D008578 1.3e-17 93.2 116 50.0
COL.COLO4_35364 Corchorus olitorius HOM05D006906 ORTHO05D008578 1.3e-17 93.2 69 63.8
Gohir.D05G217300 Gossypium hirsutum HOM05D006906 ORTHO05D008578 1.3e-17 93.2 66 65.2
Peaxi162Scf00628g00053 Petunia axillaris HOM05D006906 ORTHO05D008578 2.2e-17 92.4 69 65.2
Solyc04g077130.1 Solanum lycopersicum HOM05D006906 ORTHO05D008578 2.9e-17 92.0 112 50.0
AUR62035774 Chenopodium quinoa HOM05D006906 ORTHO05D008578 4.9e-17 91.3 101 49.5
TWI12G0785 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 6.4e-17 90.9 112 45.5
Os11g0550800 Oryza sativa ssp. japonica HOM05D006906 ORTHO05D008578 8.4e-17 90.5 69 59.4
Psat1g221800 Pisum sativum HOM05D006906 ORTHO05D008578 3.2e-16 88.6 94 56.4
SalBow2G0068 Salvia bowleyana HOM05D006906 ORTHO05D008578 3.2e-16 88.6 83 57.8
Prupe.8G111300 Prunus persica HOM05D006906 ORTHO05D008578 7.1e-16 87.4 69 62.3
TPR.G12407 Trifolium pratense HOM05D006906 ORTHO05D008578 7.1e-16 87.4 92 53.3
Nn5g30714 Nelumbo nucifera HOM05D006906 ORTHO05D008578 1.2e-15 86.7 92 54.3
Nitab4.5_0002415g0040 Nicotiana tabacum HOM05D006906 ORTHO05D008578 1.2e-15 86.7 110 47.3
PSO675G4379 Papaver somniferum HOM05D006906 ORTHO05D008578 1.2e-15 86.7 114 47.4
ATR0767G231 Amborella trichopoda HOM05D006906 ORTHO05D008578 1.6e-15 86.3 47 78.7
PSO541G5790 Papaver somniferum HOM05D006906 ORTHO05D008578 2.1e-15 85.9 114 48.2
Nitab4.5_0001614g0100 Nicotiana tabacum HOM05D006906 ORTHO05D008578 2.7e-15 85.5 62 64.5
unitig_21.g20623 Utricularia gibba HOM05D006906 ORTHO05D008578 4.6e-15 84.7 86 54.7
Medtr3g110640 Medicago truncatula HOM05D006906 ORTHO05D008578 1.3e-14 83.2 94 53.2
Migut.N02816 Erythranthe guttata HOM05D006906 ORTHO05D008578 2.5e-13 79.0 82 56.1
HPP92_027715 Vanilla planifolia HOM05D006906 ORTHO05D008578 5.3e-11 71.2 39 87.2
Manes.05G185700 Manihot esculenta HOM05D006906 ORTHO05D008578 1.2e-10 70.1 104 43.3
HPP92_027718 Vanilla planifolia HOM05D006906 ORTHO05D008578 3.4e-10 68.6 58 62.1
CBR_g48804 Chara braunii HOM05D006906 ORTHO05D008578 1.3e-09 66.6 86 41.9
Mapoly0090s0093 Marchantia polymorpha HOM05D006906 ORTHO05D008578 3.2e-08 62.0 60 56.7
Pp3c3_11690 Physcomitrium patens HOM05D006906 ORTHO05D008578 7.1e-08 60.8 78 50.0
SEGI_12109 Sequoiadendron giganteum HOM05D006906 ORTHO05D008578 2.1e-07 59.3 45 64.4


User provided reference genes

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