Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p04360 Brassica napus HOM05D007033 ORTHO05D008770 1.5e-65 252.7 122 100.0
BraA02t05400Z Brassica rapa HOM05D007033 ORTHO05D008770 1.5e-65 252.7 122 100.0
BcaC03g13530 Brassica carinata HOM05D007033 ORTHO05D008770 4.2e-65 251.1 122 99.2
BolC2t06829H Brassica oleracea HOM05D007033 ORTHO05D008770 4.2e-65 251.1 122 99.2
C02p09210 Brassica napus HOM05D007033 ORTHO05D008770 2.1e-64 248.8 122 97.5
Sp6g26610 Schrenkiella parvula HOM05D007033 ORTHO05D008770 1.6e-59 232.6 120 90.8
AL6G28700 Arabidopsis lyrata HOM05D007033 ORTHO05D008770 4.7e-56 221.1 120 86.7
BcaC04g18775 Brassica carinata HOM05D007033 ORTHO05D008770 4.0e-55 218.0 125 83.2
C09p59560 Brassica napus HOM05D007033 ORTHO05D008770 4.0e-55 218.0 125 83.2
BolC9t58794H Brassica oleracea HOM05D007033 ORTHO05D008770 4.0e-55 218.0 125 83.2
Thhalv10014961m.g Eutrema salsugineum HOM05D007033 ORTHO05D008770 4.0e-55 218.0 116 86.2
AT5G17610 Arabidopsis thaliana HOM05D007033 ORTHO05D008770 1.5e-54 216.1 121 84.3
CARHR195570 Cardamine hirsuta HOM05D007033 ORTHO05D008770 2.0e-54 215.7 122 83.6
Carub.0006s1585 Capsella rubella HOM05D007033 ORTHO05D008770 2.6e-54 215.3 121 86.0
THA.LOC104827245 Tarenaya hassleriana HOM05D007033 ORTHO05D008770 5.6e-49 197.6 123 79.7
PGR042G3214 Punica granatum HOM05D007033 ORTHO05D008770 8.3e-45 183.7 118 71.2
RcHm_v2.0_Chr1g0337311 Rosa chinensis HOM05D007033 ORTHO05D008770 1.9e-44 182.6 121 68.6
VMungo0331G1478 Vigna mungo HOM05D007033 ORTHO05D008770 2.4e-44 182.2 107 78.5
Prupe.2G100000 Prunus persica HOM05D007033 ORTHO05D008770 4.1e-44 181.4 108 75.0
FAN03G2679 Fragaria x ananassa HOM05D007033 ORTHO05D008770 7.1e-44 180.6 121 68.6
Dinv43975 Davidia involucrata HOM05D007033 ORTHO05D008770 9.2e-44 180.3 94 83.0
Nn3g19225 Nelumbo nucifera HOM05D007033 ORTHO05D008770 1.2e-43 179.9 106 76.4
FvH4_7g07210 Fragaria vesca HOM05D007033 ORTHO05D008770 2.1e-43 179.1 108 72.2
Phvul.010G038500 Phaseolus vulgaris HOM05D007033 ORTHO05D008770 3.5e-43 178.3 107 75.7
GSVIVG01011318001 Vitis vinifera HOM05D007033 ORTHO05D008770 4.6e-43 177.9 109 76.1
FAN06G3925 Fragaria x ananassa HOM05D007033 ORTHO05D008770 6.0e-43 177.6 108 71.3
MD07G1078200 Malus domestica HOM05D007033 ORTHO05D008770 1.3e-42 176.4 111 73.0
Aqoxy5G03237 Aquilegia oxysepala HOM05D007033 ORTHO05D008770 1.7e-42 176.0 117 67.5
TWI60G0127 Tripterygium wilfordii HOM05D007033 ORTHO05D008770 1.7e-42 176.0 115 67.0
Potri.013G073100 Populus trichocarpa HOM05D007033 ORTHO05D008770 3.0e-42 175.3 118 68.6
Lj3g0004375 Lotus japonicus HOM05D007033 ORTHO05D008770 5.1e-42 174.5 99 77.8
Haze_15805 Corylus avellana HOM05D007033 ORTHO05D008770 6.6e-42 174.1 113 68.1
Gohir.A13G085300 Gossypium hirsutum HOM05D007033 ORTHO05D008770 6.6e-42 174.1 111 73.9
BraA10t44240Z Brassica rapa HOM05D007033 ORTHO05D008770 8.6e-42 173.7 106 78.3
Hma1.2p1_0353F.1_g133340 Hydrangea macrophylla HOM05D007033 ORTHO05D008770 1.1e-41 173.3 95 78.9
Actinidia21596 Actinidia chinensis HOM05D007033 ORTHO05D008770 1.5e-41 172.9 113 72.6
Ciclev10033075m.g Citrus clementina HOM05D007033 ORTHO05D008770 2.5e-41 172.2 117 67.5
MD02G1238400 Malus domestica HOM05D007033 ORTHO05D008770 2.5e-41 172.2 94 78.7
Manes.08G157600 Manihot esculenta HOM05D007033 ORTHO05D008770 2.5e-41 172.2 108 73.1
Eucgr.E01772 Eucalyptus grandis HOM05D007033 ORTHO05D008770 4.3e-41 171.4 107 71.0
Gohir.D13G100400 Gossypium hirsutum HOM05D007033 ORTHO05D008770 4.3e-41 171.4 118 70.3
Gorai.013G112100 Gossypium raimondii HOM05D007033 ORTHO05D008770 4.3e-41 171.4 118 70.3
Rhsim12G0078100 Rhododendron simsii HOM05D007033 ORTHO05D008770 4.3e-41 171.4 106 73.6
Sc23g0004770 Simmondsia chinensis HOM05D007033 ORTHO05D008770 4.3e-41 171.4 103 75.7
CANSAT35G1406 Cannabis sativa HOM05D007033 ORTHO05D008770 7.3e-41 170.6 110 66.4
Thecc.05G231700 Theobroma cacao HOM05D007033 ORTHO05D008770 7.3e-41 170.6 108 70.4
EL10Ac1g00673 Beta vulgaris HOM05D007033 ORTHO05D008770 9.5e-41 170.2 113 70.8
Glyma.03G098200 Glycine max HOM05D007033 ORTHO05D008770 1.2e-40 169.9 114 67.5
Glyma.07G123600 Glycine max HOM05D007033 ORTHO05D008770 2.1e-40 169.1 107 70.1
arahy.Tifrunner.gnm1.ann1.14YBGE Arachis hypogaea HOM05D007033 ORTHO05D008770 2.8e-40 168.7 109 71.6
arahy.Tifrunner.gnm1.ann1.GIK8C1 Arachis hypogaea HOM05D007033 ORTHO05D008770 2.8e-40 168.7 109 71.6
PSO063G1631 Papaver somniferum HOM05D007033 ORTHO05D008770 8.1e-40 167.2 93 75.3
PSO782G0028 Papaver somniferum HOM05D007033 ORTHO05D008770 8.1e-40 167.2 93 75.3
TPR.G17361 Trifolium pratense HOM05D007033 ORTHO05D008770 1.1e-39 166.8 114 69.3
CsaV3_3G010550 Cucumis sativus L. HOM05D007033 ORTHO05D008770 1.8e-39 166.0 106 67.0
Sopen01g032780 Solanum pennellii HOM05D007033 ORTHO05D008770 3.1e-39 165.2 108 70.4
vmacro21112 Vaccinium macrocarpon HOM05D007033 ORTHO05D008770 3.1e-39 165.2 92 77.2
Cc02_g26390 Coffea canephora HOM05D007033 ORTHO05D008770 4.0e-39 164.9 111 70.3
Solyc01g081200.3 Solanum lycopersicum HOM05D007033 ORTHO05D008770 4.0e-39 164.9 108 70.4
PGSC0003DMG400001787 Solanum tuberosum HOM05D007033 ORTHO05D008770 4.0e-39 164.9 108 70.4
CAN.G700.33 Capsicum annuum HOM05D007033 ORTHO05D008770 5.2e-39 164.5 112 68.8
MELO3C006276.2 Cucumis melo HOM05D007033 ORTHO05D008770 5.2e-39 164.5 105 66.7
ClCG05G002970 Citrullus lanatus HOM05D007033 ORTHO05D008770 6.8e-39 164.1 105 66.7
MBI16_g43713_MAGBIO Magnolia biondii HOM05D007033 ORTHO05D008770 1.5e-38 162.9 90 80.0
Sed0003013 Sechium edule HOM05D007033 ORTHO05D008770 1.5e-38 162.9 116 63.8
CDE12G0505 Ceratophyllum demersum HOM05D007033 ORTHO05D008770 2.0e-38 162.5 112 69.6
ECA234G3633 Erigeron canadensis HOM05D007033 ORTHO05D008770 2.0e-38 162.5 108 67.6
Migut.B01441 Erythranthe guttata HOM05D007033 ORTHO05D008770 2.6e-38 162.2 94 74.5
HanXRQChr03g0088201 Helianthus annuus HOM05D007033 ORTHO05D008770 4.4e-38 161.4 118 61.0
Lsat_1_v5_gn_4_42281 Lactuca sativa HOM05D007033 ORTHO05D008770 5.8e-38 161.0 90 76.7
Sabra13G0063200 Salix brachista HOM05D007033 ORTHO05D008770 5.8e-38 161.0 105 73.3
Zm00001eb009070 Zea mays HOM05D007033 ORTHO05D008770 5.8e-38 161.0 116 64.7
CiPaw.02G048600 Carya illinoinensis HOM05D007033 ORTHO05D008770 7.6e-38 160.6 108 66.7
Peaxi162Scf00592g00448 Petunia axillaris HOM05D007033 ORTHO05D008770 7.6e-38 160.6 118 62.7
Hund17162 Selenicereus undatus HOM05D007033 ORTHO05D008770 6.4e-37 157.5 124 61.3
HPP92_003427 Vanilla planifolia HOM05D007033 ORTHO05D008770 6.4e-37 157.5 111 66.7
Lalb_Chr12g0210181 Lupinus albus HOM05D007033 ORTHO05D008770 8.3e-37 157.1 111 65.8
Psat4g215800 Pisum sativum HOM05D007033 ORTHO05D008770 5.4e-36 154.5 105 70.5
SGA_v2.0_scaffold98G29399 Striga asiatica HOM05D007033 ORTHO05D008770 7.1e-36 154.1 131 60.3
HPP92_003404 Vanilla planifolia HOM05D007033 ORTHO05D008770 7.1e-36 154.1 112 65.2
COL.COLO4_08541 Corchorus olitorius HOM05D007033 ORTHO05D008770 2.1e-35 152.5 94 72.3
Cfa003682 Carpinus fangiana HOM05D007033 ORTHO05D008770 6.0e-35 151.0 130 56.2
QL04p052404 Quercus lobata HOM05D007033 ORTHO05D008770 1.0e-34 150.2 91 74.7
Sed0002871 Sechium edule HOM05D007033 ORTHO05D008770 1.0e-34 150.2 105 62.9
MBI16_g43476_MAGBIO Magnolia biondii HOM05D007033 ORTHO05D008770 8.6e-34 147.1 100 70.0
Sc23g0004660 Simmondsia chinensis HOM05D007033 ORTHO05D008770 7.3e-33 144.1 105 65.7
Nitab4.5_0004594g0020 Nicotiana tabacum HOM05D007033 ORTHO05D008770 8.1e-32 140.6 97 70.1
SalBow5G2417 Salvia bowleyana HOM05D007033 ORTHO05D008770 1.1e-31 140.2 97 66.0
ATR0829G185 Amborella trichopoda HOM05D007033 ORTHO05D008770 1.4e-31 139.8 81 74.1
Ah.05g177250 Amaranthus hybridus HOM05D007033 ORTHO05D008770 3.1e-31 138.7 97 66.0
unitig_8.g3853 Utricularia gibba HOM05D007033 ORTHO05D008770 4.0e-31 138.3 91 65.9
Nitab4.5_0004800g0080 Nicotiana tabacum HOM05D007033 ORTHO05D008770 8.9e-31 137.1 95 66.3
AUR62014520 Chenopodium quinoa HOM05D007033 ORTHO05D008770 4.9e-29 131.3 91 70.3
SEGI_14041 Sequoiadendron giganteum HOM05D007033 ORTHO05D008770 6.4e-29 131.0 109 61.5
AUR62038014 Chenopodium quinoa HOM05D007033 ORTHO05D008770 4.2e-28 128.3 91 69.2
HPP92_025932 Vanilla planifolia HOM05D007033 ORTHO05D008770 2.7e-27 125.6 115 54.8
AagrBONN_evm.TU.Sc2ySwM_368.1536 Anthoceros agrestis HOM05D007033 ORTHO05D008770 1.4e-23 113.2 103 51.5
A10p21800 Brassica napus HOM05D007033 ORTHO05D008770 3.1e-23 112.1 57 82.5
Mapoly0058s0110 Marchantia polymorpha HOM05D007033 ORTHO05D008770 1.5e-22 109.8 109 51.4
SMO351G0381 Selaginella moellendorffii HOM05D007033 ORTHO05D008770 5.8e-22 107.8 104 46.2
TAR629G3499 Trochodendron aralioides HOM05D007033 ORTHO05D008770 2.2e-21 105.9 53 83.0
Pp3c19_9960 Physcomitrium patens HOM05D007033 ORTHO05D008770 3.8e-21 105.1 81 58.0
Pp3c18_1710 Physcomitrium patens HOM05D007033 ORTHO05D008770 7.1e-20 100.9 105 51.4
Pp3c7_5640 Physcomitrium patens HOM05D007033 ORTHO05D008770 1.2e-19 100.1 74 56.8
Atru.chr2.1689 Acer truncatum HOM05D007033 ORTHO05D008770 2.6e-14 82.4 43 81.4
Sopen05g015510 Solanum pennellii HOM05D007033 ORTHO05D008770 1.7e-13 79.7 48 68.8
Aa31LG11G12040 Aethionema arabicum HOM05D007033 ORTHO05D008770 3.9e-10 68.6 50 70.0
MCO10G230 Micromonas commoda HOM05D007033 ORTHO05D008770 6.2e-08 61.2 69 36.2
PRCOL_00006026 Prasinoderma coloniale HOM05D007033 ORTHO05D008770 1.4e-07 60.1 42 54.8
Peaxi162Scf00117g01735 Petunia axillaris HOM05D007033 ORTHO05D008770 1.5e-06 56.6 38 68.4
CBR_g44313 Chara braunii HOM05D007033 ORTHO05D008770 2.6e-06 55.8 63 39.7
CBR_g49607 Chara braunii HOM05D007033 ORTHO05D008770 4.5e-06 55.1 63 41.3


User provided reference genes

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