Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p04350 Brassica napus HOM05D007511 ORTHO05D003753 3.8e-82 308.1 158 100.0
BraA02t05399Z Brassica rapa HOM05D007511 ORTHO05D003753 9.3e-81 303.5 158 98.1
C02p09200 Brassica napus HOM05D007511 ORTHO05D003753 1.0e-79 300.1 158 96.8
BcaC03g13529 Brassica carinata HOM05D007511 ORTHO05D003753 9.4e-73 276.9 160 91.9
BolC2t06828H Brassica oleracea HOM05D007511 ORTHO05D003753 9.4e-73 276.9 160 91.9
Thhalv10015688m.g Eutrema salsugineum HOM05D007511 ORTHO05D003753 4.7e-56 221.5 203 63.5
Sp6g26630 Schrenkiella parvula HOM05D007511 ORTHO05D003753 2.3e-55 219.2 197 64.0
BcaB08g36759 Brassica carinata HOM05D007511 ORTHO05D003753 4.5e-51 204.9 198 61.1
BcaC04g18776 Brassica carinata HOM05D007511 ORTHO05D003753 1.6e-48 196.4 193 59.6
C09p59570 Brassica napus HOM05D007511 ORTHO05D003753 1.6e-48 196.4 193 59.6
BolC9t58796H Brassica oleracea HOM05D007511 ORTHO05D003753 1.6e-48 196.4 193 59.6
A10p21820 Brassica napus HOM05D007511 ORTHO05D003753 1.0e-47 193.7 192 59.4
BraA10t44242Z Brassica rapa HOM05D007511 ORTHO05D003753 1.4e-47 193.4 191 59.2
Carub.0006s1583 Capsella rubella HOM05D007511 ORTHO05D003753 5.2e-47 191.4 194 57.2
CARHR195590 Cardamine hirsuta HOM05D007511 ORTHO05D003753 1.3e-45 186.8 188 58.5
AL6G28680 Arabidopsis lyrata HOM05D007511 ORTHO05D003753 3.5e-43 178.7 201 53.2
BolC3t13471H Brassica oleracea HOM05D007511 ORTHO05D003753 8.5e-42 174.1 111 79.3
BcaB01g05209 Brassica carinata HOM05D007511 ORTHO05D003753 7.2e-41 171.0 111 78.4
A03p08430 Brassica napus HOM05D007511 ORTHO05D003753 7.2e-41 171.0 111 78.4
C03p09830 Brassica napus HOM05D007511 ORTHO05D003753 7.2e-41 171.0 111 78.4
BraA03t10166Z Brassica rapa HOM05D007511 ORTHO05D003753 7.2e-41 171.0 111 78.4
Aa31LG11G12060 Aethionema arabicum HOM05D007511 ORTHO05D003753 9.5e-41 170.6 186 52.2
AT5G17590 Arabidopsis thaliana HOM05D007511 ORTHO05D003753 3.6e-40 168.7 196 51.5
THA.LOC104802898 Tarenaya hassleriana HOM05D007511 ORTHO05D003753 1.6e-32 143.3 199 47.2
Cpa.g.sc73.86 Carica papaya HOM05D007511 ORTHO05D003753 1.8e-15 86.7 139 37.4
Duzib177G0499 Durio zibethinus HOM05D007511 ORTHO05D003753 6.4e-13 78.2 147 35.4
Atru.chr2.1724 Acer truncatum HOM05D007511 ORTHO05D003753 1.1e-12 77.4 68 51.5
Potri.019G043701 Populus trichocarpa HOM05D007511 ORTHO05D003753 1.4e-12 77.0 149 37.6
Ciclev10033674m.g Citrus clementina HOM05D007511 ORTHO05D003753 2.4e-12 76.3 142 38.7
TPR.G24583 Trifolium pratense HOM05D007511 ORTHO05D003753 3.2e-12 75.9 134 35.8
CiPaw.02G046500 Carya illinoinensis HOM05D007511 ORTHO05D003753 9.2e-12 74.3 138 34.8
Medtr8g011160 Medicago truncatula HOM05D007511 ORTHO05D003753 9.2e-12 74.3 131 35.9
Sabra19G0054300 Salix brachista HOM05D007511 ORTHO05D003753 9.2e-12 74.3 150 38.0
Cfa000931 Carpinus fangiana HOM05D007511 ORTHO05D003753 1.6e-11 73.6 66 53.0
MD02G1239600 Malus domestica HOM05D007511 ORTHO05D003753 1.6e-11 73.6 169 34.3
Manes.08G158000 Manihot esculenta HOM05D007511 ORTHO05D003753 1.6e-11 73.6 144 31.2
TWI60G1247 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 1.6e-11 73.6 126 37.3
PGSC0003DMG400043768 Solanum tuberosum HOM05D007511 ORTHO05D003753 2.1e-11 73.2 70 51.4
Sed0019168 Sechium edule HOM05D007511 ORTHO05D003753 2.7e-11 72.8 169 35.5
Lj3g0008746 Lotus japonicus HOM05D007511 ORTHO05D003753 3.5e-11 72.4 137 37.2
Prupe.2G098000 Prunus persica HOM05D007511 ORTHO05D003753 3.5e-11 72.4 166 33.1
TWI34G0987 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 2.3e-10 69.7 172 32.0
PSO782G3115 Papaver somniferum HOM05D007511 ORTHO05D003753 6.6e-10 68.2 68 45.6
TAR629G3237 Trochodendron aralioides HOM05D007511 ORTHO05D003753 6.6e-10 68.2 132 31.1
Phvul.010G032800 Phaseolus vulgaris HOM05D007511 ORTHO05D003753 8.6e-10 67.8 63 49.2
Psat4g207240 Pisum sativum HOM05D007511 ORTHO05D003753 1.1e-09 67.4 151 33.8
Sopen01g032800 Solanum pennellii HOM05D007511 ORTHO05D003753 1.5e-09 67.0 140 35.7
Nitab4.5_0004800g0110 Nicotiana tabacum HOM05D000001 ORTHO05D011953 2.5e-09 66.2 70 45.7
Ca_23172_v3 Cicer arietinum L. HOM05D007511 ORTHO05D003753 4.3e-09 65.5 126 36.5
MD07G1077000 Malus domestica HOM05D007511 ORTHO05D003753 9.5e-09 64.3 166 30.1
Nn1g09148 Nelumbo nucifera HOM05D007511 ORTHO05D003753 1.2e-08 63.9 66 42.4
PSO063G5504 Papaver somniferum HOM05D007511 ORTHO05D003753 1.2e-08 63.9 68 42.6
Psat0s409g0080 Pisum sativum HOM05D007511 ORTHO05D003753 2.1e-08 63.2 67 40.3
Hma1.2p1_0353F.1_g133330 Hydrangea macrophylla HOM05D007511 ORTHO05D003753 2.8e-08 62.8 64 48.4
Lalb_Chr07g0194541 Lupinus albus HOM05D007511 ORTHO05D003753 4.7e-08 62.0 127 34.6
MBI06_g35216_MAGBIO Magnolia biondii HOM05D007511 ORTHO05D003753 4.7e-08 62.0 86 39.5
Aqoxy5G00551 Aquilegia oxysepala HOM05D007511 ORTHO05D003753 6.2e-08 61.6 148 31.8
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 6.2e-08 61.6 147 32.0
Glyma.16G082300 Glycine max HOM05D007511 ORTHO05D003753 6.2e-08 61.6 153 31.4
Oeu032775.1 Olea europaea HOM05D007511 ORTHO05D003753 6.2e-08 61.6 69 42.0
RcHm_v2.0_Chr1g0337051 Rosa chinensis HOM05D007511 ORTHO05D003753 6.2e-08 61.6 147 32.0
Glyma.03G092200 Glycine max HOM05D007511 ORTHO05D003753 1.1e-07 60.8 149 32.2
Oeu024951.1 Olea europaea HOM05D007511 ORTHO05D003753 1.1e-07 60.8 69 40.6
Sopen10g009620 Solanum pennellii HOM05D007511 ORTHO05D025904 1.8e-07 60.1 73 38.4
Solyc10g024480.1 Solanum lycopersicum HOM05D007511 ORTHO05D003753 2.3e-07 59.7 73 38.4
CANSAT35G2046 Cannabis sativa HOM05D007511 ORTHO05D003753 3.1e-07 59.3 61 41.0
FAN03G1709 Fragaria x ananassa HOM05D007511 ORTHO05D003753 3.1e-07 59.3 147 32.0
Peaxi162Scf01343g00114 Petunia axillaris HOM05D007511 ORTHO05D003753 4.0e-07 58.9 162 28.4
FAN01G1810 Fragaria x ananassa HOM05D007511 ORTHO05D003753 5.2e-07 58.5 147 33.3
FvH4_7g07110 Fragaria vesca HOM05D007511 ORTHO05D003753 6.8e-07 58.2 149 31.5
Gohir.D11G235550 Gossypium hirsutum HOM05D007511 ORTHO05D003753 6.8e-07 58.2 133 33.1
FAN06G3938 Fragaria x ananassa HOM05D007511 ORTHO05D003753 1.2e-06 57.4 154 31.8
Gohir.A11G221900 Gossypium hirsutum HOM05D007511 ORTHO05D003753 1.2e-06 57.4 133 33.8
Eucgr.D00980 Eucalyptus grandis HOM05D007511 ORTHO05D003753 1.5e-06 57.0 160 31.9
Gorai.007G248300 Gossypium raimondii HOM05D007511 ORTHO05D003753 1.5e-06 57.0 132 33.3


User provided reference genes

Program Settings