Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p04220 Brassica napus HOM05D002536 ORTHO05D008091 4.4e-159 564.7 306 100.0
BraA02t05385Z Brassica rapa HOM05D002536 ORTHO05D008091 4.4e-159 564.7 306 100.0
BolC2t06821H Brassica oleracea HOM05D002536 ORTHO05D008091 1.7e-150 536.2 307 94.8
C02p09100 Brassica napus HOM05D002536 ORTHO05D008091 3.1e-149 531.9 311 95.2
Sp6g26760 Schrenkiella parvula HOM05D002536 ORTHO05D008091 2.7e-140 502.3 314 87.9
Thhalv10014009m.g Eutrema salsugineum HOM05D002536 ORTHO05D008091 2.7e-132 475.7 299 88.0
BcaC03g13522 Brassica carinata HOM05D002536 ORTHO05D008091 9.5e-130 467.2 264 93.9
CARHR195750 Cardamine hirsuta HOM05D002536 ORTHO05D008091 5.2e-128 461.5 314 83.1
AL6G28530 Arabidopsis lyrata HOM05D002536 ORTHO05D008091 7.5e-127 457.6 310 83.9
Carub.0006s1568 Capsella rubella HOM05D002536 ORTHO05D008091 1.8e-125 453.0 310 83.2
Aa31LG11G12180 Aethionema arabicum HOM05D002536 ORTHO05D008091 9.5e-122 440.7 284 81.7
Atru.chr1.1780 Acer truncatum HOM05D002536 ORTHO05D008091 1.3e-110 403.7 270 75.6
Atru.chr1.1783 Acer truncatum HOM05D002536 ORTHO05D008091 1.3e-110 403.7 270 75.6
MELO3C020303.2 Cucumis melo HOM05D002536 ORTHO05D008091 6.4e-110 401.4 310 69.0
COL.COLO4_16592 Corchorus olitorius HOM05D002536 ORTHO05D008091 2.4e-109 399.4 321 70.7
Ciclev10012168m.g Citrus clementina HOM05D002536 ORTHO05D008091 4.1e-109 398.7 273 78.8
Sabra04G0061700 Salix brachista HOM05D002536 ORTHO05D008091 9.2e-109 397.5 273 74.7
CsaV3_3G017670 Cucumis sativus L. HOM05D002536 ORTHO05D008091 3.5e-108 395.6 304 68.8
Sed0014940 Sechium edule HOM05D002536 ORTHO05D008091 3.5e-108 395.6 286 73.1
TWI53G1346 Tripterygium wilfordii HOM05D002536 ORTHO05D008091 7.8e-108 394.4 307 68.1
Actinidia15922 Actinidia chinensis HOM05D002536 ORTHO05D008091 5.1e-107 391.7 286 74.5
Potri.004G091600 Populus trichocarpa HOM05D002536 ORTHO05D008091 1.9e-106 389.8 273 74.4
Rhsim10G0078900 Rhododendron simsii HOM05D002536 ORTHO05D008091 3.3e-106 389.0 271 72.7
AT5G17460 Arabidopsis thaliana HOM05D002536 ORTHO05D008091 5.6e-106 388.3 239 89.5
ClCG05G010840 Citrullus lanatus HOM05D002536 ORTHO05D008091 1.2e-105 387.1 273 73.6
DCAR_008922 Daucus carota HOM05D000103 ORTHO05D008091 1.2e-105 387.1 267 74.9
Cpa.g.sc116.19 Carica papaya HOM05D002536 ORTHO05D008091 4.7e-105 385.2 269 78.8
CANSAT78G0797 Cannabis sativa HOM05D002536 ORTHO05D008091 5.2e-104 381.7 271 72.7
arahy.Tifrunner.gnm1.ann1.SZ684F Arachis hypogaea HOM05D002536 ORTHO05D008091 6.8e-104 381.3 270 72.2
Lj2P435T31 Lonicera japonica HOM05D002536 ORTHO05D008091 4.4e-103 378.6 264 73.1
Psat2g023480 Pisum sativum HOM05D002536 ORTHO05D008091 4.4e-103 378.6 310 63.9
AUR62023248 Chenopodium quinoa HOM05D002536 ORTHO05D008091 1.3e-102 377.1 271 72.3
Lalb_Chr03g0036071 Lupinus albus HOM05D002536 ORTHO05D008091 2.2e-102 376.3 308 64.3
arahy.Tifrunner.gnm1.ann1.NZLK2N Arachis hypogaea HOM05D002536 ORTHO05D008091 3.7e-102 375.6 269 71.0
TPR.G11790 Trifolium pratense HOM05D002536 ORTHO05D008091 6.4e-102 374.8 308 64.6
Cc07_g08230 Coffea canephora HOM05D002536 ORTHO05D008091 1.1e-101 374.0 304 66.4
Medtr5g086010 Medicago truncatula HOM05D002536 ORTHO05D008091 1.4e-101 373.6 278 68.3
Medtr5g087440 Medicago truncatula HOM05D002536 ORTHO05D008091 1.4e-101 373.6 308 63.3
LjContig00564g0008816 Lotus japonicus HOM05D002536 ORTHO05D008091 1.9e-101 373.2 270 70.7
Eucgr.F02816 Eucalyptus grandis HOM05D002536 ORTHO05D008091 4.1e-101 372.1 270 70.4
PGR004G1229 Punica granatum HOM05D002536 ORTHO05D008091 7.1e-101 371.3 272 71.3
EL10Ac2g04494 Beta vulgaris HOM05D002536 ORTHO05D008091 9.2e-101 370.9 271 71.2
Ca_06135_v3 Cicer arietinum L. HOM05D002536 ORTHO05D008091 1.6e-100 370.2 308 63.3
Gohir.D04G186100 Gossypium hirsutum HOM05D002536 ORTHO05D008091 2.1e-100 369.8 293 72.0
Gorai.012G182500 Gossypium raimondii HOM05D002536 ORTHO05D008091 2.1e-100 369.8 293 72.0
Gohir.A04G142800 Gossypium hirsutum HOM05D002536 ORTHO05D008091 2.7e-100 369.4 301 71.1
Thecc.02G292900 Theobroma cacao HOM05D002536 ORTHO05D008091 2.7e-100 369.4 318 68.2
Haze_14213 Corylus avellana HOM05D002536 ORTHO05D008091 3.5e-100 369.0 309 64.1
Hma1.2p1_0283F.1_g113560 Hydrangea macrophylla HOM05D002536 ORTHO05D008091 4.6e-100 368.6 305 67.9
Ah.10g037920 Amaranthus hybridus HOM05D002536 ORTHO05D008091 1.0e-99 367.5 266 70.3
Aqoxy3G00142 Aquilegia oxysepala HOM05D002536 ORTHO05D008091 1.3e-99 367.1 270 69.6
Sc10g0000870 Simmondsia chinensis HOM05D002536 ORTHO05D008091 1.7e-99 366.7 291 69.8
TAR622G0880 Trochodendron aralioides HOM05D002536 ORTHO05D008091 2.3e-99 366.3 271 70.8
Cfa007856 Carpinus fangiana HOM05D002536 ORTHO05D008091 3.0e-99 365.9 312 62.8
GSVIVG01030878001 Vitis vinifera HOM05D002536 ORTHO05D008091 3.0e-99 365.9 281 68.3
QL05p059601 Quercus lobata HOM05D002536 ORTHO05D008091 3.9e-99 365.5 269 69.5
FAN23G2237 Fragaria x ananassa HOM05D002536 ORTHO05D008091 5.1e-99 365.2 303 64.4
Duzib248G1146 Durio zibethinus HOM05D002536 ORTHO05D008091 1.1e-98 364.0 301 70.1
Oeu047422.1 Olea europaea HOM05D002536 ORTHO05D008091 1.9e-98 363.2 270 74.1
Dinv19004 Davidia involucrata HOM05D002536 ORTHO05D008091 3.3e-98 362.5 285 71.6
QL05p058873 Quercus lobata HOM05D002536 ORTHO05D008091 3.3e-98 362.5 287 65.9
QL05p059839 Quercus lobata HOM05D002536 ORTHO05D008091 3.3e-98 362.5 269 69.5
CiPaw.04G045700 Carya illinoinensis HOM05D002536 ORTHO05D008091 4.3e-98 362.1 270 70.4
RcHm_v2.0_Chr3g0492091 Rosa chinensis HOM05D002536 ORTHO05D008091 4.3e-98 362.1 270 74.4
HanXRQChr11g0325231 Helianthus annuus HOM05D002536 ORTHO05D008091 7.3e-98 361.3 304 63.8
Prupe.3G152500 Prunus persica HOM05D002536 ORTHO05D008091 9.5e-98 360.9 270 68.9
CSS0023678 Camellia sinensis var. sinensis HOM05D002536 ORTHO05D006290 1.2e-97 360.5 269 73.6
MSTRG.23612 Avicennia marina HOM05D002536 ORTHO05D008091 1.6e-97 360.1 290 65.5
GSVIVG01030879001 Vitis vinifera HOM05D002536 ORTHO05D008091 2.8e-97 359.4 267 70.0
FvH4_1g30050 Fragaria vesca HOM05D002536 ORTHO05D008091 3.6e-97 359.0 303 67.0
MD09G1260700 Malus domestica HOM05D002536 ORTHO05D008091 3.6e-97 359.0 269 69.1
Hund13690 Selenicereus undatus HOM05D002536 ORTHO05D008091 3.6e-97 359.0 268 68.7
arahy.Tifrunner.gnm1.ann1.YLI9AK Arachis hypogaea HOM05D002536 ORTHO05D008091 1.1e-96 357.5 243 73.3
Sopen02g035940 Solanum pennellii HOM05D002536 ORTHO05D008091 5.2e-96 355.1 272 69.1
FAN26G2179 Fragaria x ananassa HOM05D002536 ORTHO05D008091 6.8e-96 354.8 303 67.0
Manes.01G115200 Manihot esculenta HOM05D002536 ORTHO05D008091 6.8e-96 354.8 229 78.6
Solyc02g091320.4 Solanum lycopersicum HOM05D002536 ORTHO05D008091 1.5e-95 353.6 272 68.8
MBI16_g05920_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D006290 2.0e-95 353.2 270 69.6
arahy.Tifrunner.gnm1.ann1.CBV847 Arachis hypogaea HOM05D002536 ORTHO05D008091 3.4e-95 352.4 270 66.3
FAN19G1396 Fragaria x ananassa HOM05D002536 ORTHO05D008091 1.3e-94 350.5 269 71.7
ECA232G4028 Erigeron canadensis HOM05D002536 ORTHO05D008091 1.7e-94 350.1 271 66.4
VMungo1309G0890 Vigna mungo HOM05D002536 ORTHO05D008091 2.9e-94 349.4 270 66.3
Nn3g18195 Nelumbo nucifera HOM05D002536 ORTHO05D008091 4.9e-94 348.6 271 68.3
Migut.H00262 Erythranthe guttata HOM05D002536 ORTHO05D008091 1.9e-93 346.7 270 65.6
SalBow3G4287 Salvia bowleyana HOM05D002536 ORTHO05D008091 1.9e-93 346.7 270 65.9
Phvul.004G133300 Phaseolus vulgaris HOM05D002536 ORTHO05D008091 9.2e-93 344.4 279 64.9
Lsat_1_v5_gn_4_154760 Lactuca sativa HOM05D002536 ORTHO05D008091 7.8e-92 341.3 273 67.0
Nitab4.5_0002456g0160 Nicotiana tabacum HOM05D002536 ORTHO05D008091 1.3e-91 340.5 272 66.9
Nitab4.5_0002248g0020 Nicotiana tabacum HOM05D002536 ORTHO05D008091 1.7e-91 340.1 272 66.9
PGSC0003DMG400030642 Solanum tuberosum HOM05D002536 ORTHO05D008091 2.3e-91 339.7 298 63.8
CAN.G625.80 Capsicum annuum HOM05D002536 ORTHO05D008091 6.6e-91 338.2 298 63.4
Peaxi162Scf00803g00531 Petunia axillaris HOM05D002536 ORTHO05D008091 2.5e-90 336.3 270 66.7
Phvul.008G162400 Phaseolus vulgaris HOM05D002536 ORTHO05D008091 3.3e-90 335.9 278 63.3
PSO782G0049 Papaver somniferum HOM05D002536 ORTHO05D008091 4.4e-87 325.5 280 64.3
PSO478G1642 Papaver somniferum HOM05D002536 ORTHO05D008091 1.7e-86 323.6 274 65.3
Os01g0125700 Oryza sativa ssp. japonica HOM05D002536 ORTHO05D008091 7.1e-85 318.2 270 65.2
QL05p059463 Quercus lobata HOM05D002536 ORTHO05D008091 1.0e-83 314.3 269 61.7
AUR62023202 Chenopodium quinoa HOM05D002536 ORTHO05D008091 8.1e-81 304.7 216 72.2
CDE07G0699 Ceratophyllum demersum HOM05D002536 ORTHO05D008091 4.5e-79 298.9 270 60.0
ATR0041G006 Amborella trichopoda HOM05D002536 ORTHO05D008091 7.6e-79 298.1 259 60.6
SHI17045 Sapria himalayana HOM05D002536 ORTHO05D008091 1.7e-78 297.0 274 63.9
FAN28G0948 Fragaria x ananassa HOM05D002536 ORTHO05D008091 2.4e-77 293.1 237 65.4
SGA_v2.0_scaffold6G03262 Striga asiatica HOM05D002536 ORTHO05D008091 2.4e-77 293.1 252 58.7
SGA_v2.0_scaffold6G03263 Striga asiatica HOM05D002536 ORTHO05D008091 3.7e-73 279.3 250 57.6
SGA_v2.0_scaffold6G03266 Striga asiatica HOM05D002536 ORTHO05D008091 5.8e-71 271.9 243 58.8
Glyma.14G164000 Glycine max HOM05D002536 ORTHO05D008091 3.3e-66 256.1 286 53.1
Zm00001eb334950 Zea mays HOM05D002536 ORTHO05D008091 1.6e-65 253.8 170 72.9
MBI16_g46274_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D008091 6.2e-65 251.9 172 73.8
MD09G1260800 Malus domestica HOM05D002536 ORTHO05D008091 2.9e-62 243.0 187 69.0
unitig_899.g15351 Utricularia gibba HOM05D002536 ORTHO05D008091 3.2e-61 239.6 209 57.9
SGA_v2.0_scaffold6G03268 Striga asiatica HOM05D002536 ORTHO05D008091 4.1e-56 222.6 236 53.0
SEGI_34238 Sequoiadendron giganteum HOM05D002536 ORTHO05D008091 1.1e-53 214.5 274 44.9
Glyma.13G079200 Glycine max HOM05D002536 ORTHO05D008091 6.1e-52 208.8 197 59.9
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 8.8e-43 178.3 134 69.4
MD09G1260900 Malus domestica HOM05D002536 ORTHO05D008091 2.2e-38 163.7 186 51.1
FAN28G0812 Fragaria x ananassa HOM05D002536 ORTHO05D008091 5.0e-38 162.5 267 44.6
A10p21940 Brassica napus HOM05D002536 ORTHO05D008091 9.4e-29 131.7 81 92.6
BcaC04g18790 Brassica carinata HOM05D002536 ORTHO05D008091 4.4e-26 122.9 85 75.3
BolC9t58807H Brassica oleracea HOM05D002536 ORTHO05D008091 2.2e-25 120.6 85 74.1
C09p59690 Brassica napus HOM05D002536 ORTHO05D008091 8.3e-25 118.6 85 74.1
HPP92_000766 Vanilla planifolia HOM05D002536 ORTHO05D008091 1.1e-24 118.2 117 59.0
BraA10t44252Z Brassica rapa HOM05D002536 ORTHO05D008091 1.8e-11 74.3 66 62.1
A10p21930 Brassica napus HOM05D002536 ORTHO05D008091 6.8e-11 72.4 66 62.1


User provided reference genes

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