Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 3.7e-76 288.1 143 100.0
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 2.4e-67 258.8 145 91.0
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 1.1e-61 240.0 145 88.3
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 4.4e-61 238.0 143 86.0
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 3.8e-57 224.9 145 81.4
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 3.8e-57 224.9 145 81.4
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 6.3e-52 207.6 149 78.5
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 7.5e-45 184.1 152 69.7
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 9.1e-43 177.2 138 71.0
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 1.6e-42 176.4 138 71.0
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 1.6e-42 176.4 138 71.0
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 1.5e-37 159.8 143 65.0
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 1.5e-37 159.8 143 65.0
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 7.0e-35 151.0 141 64.5
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 1.5e-32 143.3 137 61.3
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 6.1e-31 137.9 144 59.7
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 1.7e-28 129.8 153 54.2
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 1.8e-27 126.3 134 56.0
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 3.1e-22 109.0 150 49.3
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 3.9e-17 92.0 71 62.0
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 1.9e-16 89.7 51 72.5
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 1.2e-15 87.0 89 53.9
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 2.1e-15 86.3 67 59.7
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 2.1e-15 86.3 67 59.7
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 4.7e-15 85.1 114 50.9
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 6.2e-15 84.7 106 44.3
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 8.1e-15 84.3 77 57.1
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 1.1e-14 84.0 105 45.7
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 1.1e-14 84.0 68 58.8
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 1.1e-14 84.0 70 54.3
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 1.1e-14 84.0 70 54.3
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 1.1e-14 84.0 53 66.0
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 1.4e-14 83.6 44 79.5
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 1.8e-14 83.2 63 66.7
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 1.8e-14 83.2 48 72.9
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 2.3e-14 82.8 80 55.0
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 2.3e-14 82.8 70 55.7
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 3.1e-14 82.4 73 60.3
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 4.0e-14 82.0 53 64.2
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 5.2e-14 81.6 53 71.7
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 5.2e-14 81.6 91 51.6
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 5.2e-14 81.6 76 53.9
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 6.8e-14 81.3 91 48.4
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 6.8e-14 81.3 68 57.4
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 6.8e-14 81.3 108 41.7
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 6.8e-14 81.3 37 86.5
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 8.9e-14 80.9 67 61.2
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 1.2e-13 80.5 105 41.0
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 1.5e-13 80.1 81 48.1
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 2.0e-13 79.7 51 60.8
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 2.6e-13 79.3 72 56.9
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 3.4e-13 79.0 49 67.3
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 4.4e-13 78.6 61 62.3
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 4.4e-13 78.6 68 55.9
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 4.4e-13 78.6 46 67.4
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 1.3e-12 77.0 86 45.3
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 1.7e-12 76.6 104 47.1
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 2.2e-12 76.3 104 47.1
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 2.2e-12 76.3 104 47.1
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 2.9e-12 75.9 133 36.1
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 3.7e-12 75.5 70 54.3
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 4.9e-12 75.1 82 47.6
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 6.4e-12 74.7 41 75.6
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 8.3e-12 74.3 34 88.2
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 1.1e-11 73.9 125 42.4
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 1.1e-11 73.9 43 69.8
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 2.4e-11 72.8 32 87.5
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 2.4e-11 72.8 124 37.1
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 2.4e-11 72.8 65 55.4
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 4.1e-11 72.0 44 72.7
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 4.1e-11 72.0 34 85.3
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 5.4e-11 71.6 61 59.0
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 9.2e-11 70.9 31 90.3
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 1.2e-10 70.5 69 55.1
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 1.6e-10 70.1 31 87.1
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 2.7e-10 69.3 31 83.9
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 2.7e-10 69.3 46 65.2
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 3.5e-10 68.9 72 45.8
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 7.8e-10 67.8 31 83.9
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 7.8e-10 67.8 56 53.6
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 7.8e-10 67.8 67 49.3
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 7.8e-10 67.8 82 47.6
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 1.0e-09 67.4 62 48.4
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 1.0e-09 67.4 62 48.4
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 1.3e-09 67.0 62 48.4
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 1.7e-09 66.6 105 39.0
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 1.7e-09 66.6 30 83.3
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 3.0e-09 65.9 31 80.6
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 3.9e-09 65.5 72 51.4
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 6.6e-09 64.7 112 39.3
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 8.6e-09 64.3 65 52.3
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 8.6e-09 64.3 33 75.8
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 8.6e-09 64.3 104 42.3
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 1.1e-08 63.9 29 82.8
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 1.1e-08 63.9 61 54.1
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 1.9e-08 63.2 40 60.0
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 2.5e-08 62.8 117 34.2
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 7.3e-08 61.2 89 36.0
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 7.3e-08 61.2 87 39.1
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 1.2e-07 60.5 30 70.0
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 6.2e-07 58.2 66 42.4
Dinv40044 Davidia involucrata HOM05D007510 ORTHO05D009587 6.2e-07 58.2 57 56.1
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 1.4e-06 57.0 65 49.2


User provided reference genes

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