Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p03170 Brassica napus HOM05D003495 ORTHO05D004159 0.0e+00 3967.5 1980 100.0
BraA02t05287Z Brassica rapa HOM05D003495 ORTHO05D004159 0.0e+00 3964.5 1980 99.9
C02p07920 Brassica napus HOM05D003495 ORTHO05D004159 0.0e+00 3952.1 1980 99.6
BolC2t06715H Brassica oleracea HOM05D003495 ORTHO05D004159 0.0e+00 3952.1 1980 99.6
BcaC03g18444 Brassica carinata HOM05D003495 ORTHO05D004159 0.0e+00 3947.5 1980 99.4
BcaNung02199 Brassica carinata HOM05D003495 ORTHO05D004159 0.0e+00 3919.4 1980 98.8
Thhalv10012410m.g Eutrema salsugineum HOM05D003495 ORTHO05D004159 0.0e+00 3866.6 1986 97.2
Sp6g28440 Schrenkiella parvula HOM05D003495 ORTHO05D004159 0.0e+00 3862.4 1983 97.1
CARHR197650 Cardamine hirsuta HOM05D003495 ORTHO05D004159 0.0e+00 3843.5 1983 96.7
AT5G15680 Arabidopsis thaliana HOM05D003495 ORTHO05D004159 0.0e+00 3812.7 1983 95.9
AL6G26520 Arabidopsis lyrata HOM05D003495 ORTHO05D004159 0.0e+00 3811.2 1983 96.0
Carub.0006s1383 Capsella rubella HOM05D003495 ORTHO05D004159 0.0e+00 3810.0 1983 95.9
Aa31LG11G13890 Aethionema arabicum HOM05D003495 ORTHO05D004159 0.0e+00 3781.9 1987 95.0
THA.LOC104802983 Tarenaya hassleriana HOM05D003495 ORTHO05D004159 0.0e+00 3657.5 1981 91.3
THA.LOC104820987 Tarenaya hassleriana HOM05D003495 ORTHO05D004159 0.0e+00 3653.2 1984 91.4
A03p07290 Brassica napus HOM05D003495 ORTHO05D004159 0.0e+00 3605.8 1984 91.3
C03p08360 Brassica napus HOM05D003495 ORTHO05D004159 0.0e+00 3575.8 1984 90.6
BraA03t10052Z Brassica rapa HOM05D003495 ORTHO05D004159 0.0e+00 3573.5 2012 89.6
BolC3t13343H Brassica oleracea HOM05D003495 ORTHO05D004159 0.0e+00 3549.6 2013 89.1
Ciclev10010888m.g Citrus clementina HOM05D003495 ORTHO05D004159 0.0e+00 3473.7 1984 87.0
Prupe.3G246500 Prunus persica HOM05D003495 ORTHO05D004159 0.0e+00 3452.1 1983 86.5
Atru.chr8.588 Acer truncatum HOM05D003495 ORTHO05D004159 0.0e+00 3441.7 1983 86.3
Thecc.02G251800 Theobroma cacao HOM05D003495 ORTHO05D004159 0.0e+00 3440.2 1984 86.3
BcaB01g05032 Brassica carinata HOM05D003495 ORTHO05D004159 0.0e+00 3437.9 1981 88.0
QL02p063585 Quercus lobata HOM05D003495 ORTHO05D004159 0.0e+00 3435.6 1983 86.0
Cfa007716 Carpinus fangiana HOM05D003495 ORTHO05D004159 0.0e+00 3427.1 1983 85.9
MD09G1077600 Malus domestica HOM05D003495 ORTHO05D004159 0.0e+00 3426.0 1981 85.8
RcHm_v2.0_Chr2g0164371 Rosa chinensis HOM05D003495 ORTHO05D004159 0.0e+00 3423.6 1983 85.8
TWI60G0296 Tripterygium wilfordii HOM05D003495 ORTHO05D004159 0.0e+00 3421.7 1984 85.7
MD17G1067900 Malus domestica HOM05D003495 ORTHO05D004159 0.0e+00 3421.3 1984 86.0
FvH4_6g46050 Fragaria vesca HOM05D003495 ORTHO05D004159 0.0e+00 3420.6 1979 85.7
FAN14G1484 Fragaria x ananassa HOM05D003495 ORTHO05D004159 0.0e+00 3419.4 1979 85.6
Manes.01G104801 Manihot esculenta HOM05D003495 ORTHO05D004159 0.0e+00 3419.4 1980 86.2
Gorai.005G181800 Gossypium raimondii HOM05D003495 ORTHO05D004159 0.0e+00 3415.6 1985 85.7
Haze_14358 Corylus avellana HOM05D003495 ORTHO05D004159 0.0e+00 3408.6 2025 84.2
FAN09G4792 Fragaria x ananassa HOM05D003495 ORTHO05D004159 0.0e+00 3404.4 1979 85.3
CANSAT64G2734 Cannabis sativa HOM05D003495 ORTHO05D004159 0.0e+00 3403.6 1985 85.3
CsaV3_5G038800 Cucumis sativus L. HOM05D003495 ORTHO05D004159 0.0e+00 3402.8 1984 85.1
FAN02G1990 Fragaria x ananassa HOM05D003495 ORTHO05D004159 0.0e+00 3402.8 2001 84.5
MELO3C022060.2 Cucumis melo HOM05D003495 ORTHO05D004159 0.0e+00 3399.4 1984 85.1
Cc07_g04650 Coffea canephora HOM05D003495 ORTHO05D004159 0.0e+00 3395.5 1985 84.9
Duzib268G1709 Durio zibethinus HOM05D003495 ORTHO05D004159 0.0e+00 3392.8 1981 85.5
Sopen02g034150 Solanum pennellii HOM05D003495 ORTHO05D004159 0.0e+00 3373.6 1984 84.2
Peaxi162Scf00020g02133 Petunia axillaris HOM05D003495 ORTHO05D004159 0.0e+00 3370.5 1987 84.3
Nitab4.5_0002171g0110 Nicotiana tabacum HOM05D003495 ORTHO05D004159 0.0e+00 3364.3 2004 83.4
Dinv34893 Davidia involucrata HOM05D003495 ORTHO05D004159 0.0e+00 3358.9 1983 84.1
Nitab4.5_0002978g0060 Nicotiana tabacum HOM05D003495 ORTHO05D004159 0.0e+00 3355.8 1986 83.8
FAN05G3267 Fragaria x ananassa HOM05D003495 ORTHO05D004159 0.0e+00 3354.7 2011 83.3
Actinidia18095 Actinidia chinensis HOM05D003495 ORTHO05D004159 0.0e+00 3350.5 1985 83.8
DCAR_011000 Daucus carota HOM05D003495 ORTHO05D004159 0.0e+00 3347.4 1984 83.9
Lalb_Chr02g0158651 Lupinus albus HOM05D003495 ORTHO05D004159 0.0e+00 3341.6 1982 83.5
Medtr6g016215 Medicago truncatula HOM05D003495 ORTHO05D004159 0.0e+00 3340.1 1982 84.0
CAN.G497.44 Capsicum annuum HOM05D003495 ORTHO05D004159 0.0e+00 3339.7 1984 83.6
Oeu062191.1 Olea europaea HOM05D003495 ORTHO05D004159 0.0e+00 3337.4 1984 84.0
CSS0018508 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D004159 0.0e+00 3336.6 1985 84.3
CSS0005441 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D004159 0.0e+00 3334.7 1985 84.1
TAR374G0385 Trochodendron aralioides HOM05D003495 ORTHO05D004159 0.0e+00 3334.3 1988 83.7
Gohir.A03G138900 Gossypium hirsutum HOM05D003495 ORTHO05D004159 0.0e+00 3333.5 1985 84.1
Sed0005421 Sechium edule HOM05D003495 ORTHO05D004159 0.0e+00 3330.4 1989 83.6
Dinv33880 Davidia involucrata HOM05D003495 ORTHO05D004159 0.0e+00 3329.7 1922 85.7
PGR004G1253 Punica granatum HOM05D003495 ORTHO05D004159 0.0e+00 3329.3 1983 83.4
Lj4C126G12 Lonicera japonica HOM05D003495 ORTHO05D004159 0.0e+00 3326.2 1985 84.4
Peaxi162Scf00479g01011 Petunia axillaris HOM05D003495 ORTHO05D004159 0.0e+00 3322.3 1995 83.1
Sed0015478 Sechium edule HOM05D003495 ORTHO05D004159 0.0e+00 3320.8 1983 83.5
Potri.017G106100 Populus trichocarpa HOM05D003495 ORTHO05D004159 0.0e+00 3318.9 1981 84.1
arahy.Tifrunner.gnm1.ann1.AQF1TQ Arachis hypogaea HOM05D003495 ORTHO05D004159 0.0e+00 3314.2 1993 83.3
Duzib248G1077 Durio zibethinus HOM05D003495 ORTHO05D004159 0.0e+00 3308.9 1980 83.8
Migut.K00878 Erythranthe guttata HOM05D003495 ORTHO05D004159 0.0e+00 3308.1 1984 83.3
Lj2g0019402 Lotus japonicus HOM05D003495 ORTHO05D004159 0.0e+00 3307.7 1982 83.2
CSS0004216 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D004159 0.0e+00 3307.3 1985 83.3
Phvul.004G045000 Phaseolus vulgaris HOM05D003495 ORTHO05D004159 0.0e+00 3303.1 1982 83.4
Eucgr.I02084 Eucalyptus grandis HOM05D003495 ORTHO05D004159 0.0e+00 3300.0 1986 82.6
vmacro05603 Vaccinium macrocarpon HOM05D003495 ORTHO05D004159 0.0e+00 3298.8 1988 82.8
Hma1.2p1_0588F.1_g184640 Hydrangea macrophylla HOM05D003495 ORTHO05D004159 0.0e+00 3296.1 2036 81.1
Glyma.19G037200 Glycine max HOM05D003495 ORTHO05D004159 0.0e+00 3295.0 1982 83.2
Sopen03g010670 Solanum pennellii HOM05D003495 ORTHO05D004159 0.0e+00 3293.1 1986 82.4
Glyma.11G061700 Glycine max HOM05D003495 ORTHO05D004159 0.0e+00 3287.7 1982 83.0
Cpa.g.sc14.256 Carica papaya HOM05D003495 ORTHO05D004159 0.0e+00 3286.1 1864 87.6
MSTRG.3380 Avicennia marina HOM05D003495 ORTHO05D004159 0.0e+00 3276.5 1984 82.5
ClCG11G005050 Citrullus lanatus HOM05D003495 ORTHO05D004159 0.0e+00 3275.3 1983 82.9
Hund25028 Selenicereus undatus HOM05D003495 ORTHO05D004159 0.0e+00 3274.2 1985 81.9
EL10Ac6g14290 Beta vulgaris HOM05D003495 ORTHO05D004159 0.0e+00 3261.9 1982 82.1
Aqoxy5G03432 Aquilegia oxysepala HOM05D003495 ORTHO05D004159 0.0e+00 3254.5 1987 81.4
Sc04g0005950 Simmondsia chinensis HOM05D003495 ORTHO05D004159 0.0e+00 3246.8 1987 81.2
HanXRQChr15g0464911 Helianthus annuus HOM05D003495 ORTHO05D004159 0.0e+00 3241.8 1986 81.4
Psat1g064160 Pisum sativum HOM05D003495 ORTHO05D004159 0.0e+00 3238.7 1983 81.8
CAN.G563.4 Capsicum annuum HOM05D003495 ORTHO05D004159 0.0e+00 3234.1 1987 80.9
AUR62002798 Chenopodium quinoa HOM05D003495 ORTHO05D004159 0.0e+00 3233.7 1987 81.2
AUR62014105 Chenopodium quinoa HOM05D003495 ORTHO05D004159 0.0e+00 3219.5 1987 81.0
TAR622G0597 Trochodendron aralioides HOM05D003495 ORTHO05D004159 0.0e+00 3216.4 1984 81.3
Ah.02g128180 Amaranthus hybridus HOM05D003495 ORTHO05D004159 0.0e+00 3209.9 1999 80.3
TPR.G15949 Trifolium pratense HOM05D003495 ORTHO05D004159 0.0e+00 3205.6 1927 82.9
PSO063G7059 Papaver somniferum HOM05D003495 ORTHO05D004159 0.0e+00 3204.8 2010 80.0
GSVIVG01036514001 Vitis vinifera HOM05D003495 ORTHO05D004159 0.0e+00 3185.2 1985 81.1
Gorai.002G166500 Gossypium raimondii HOM05D003495 ORTHO05D004159 0.0e+00 3184.8 1990 80.6
ECA232G2419 Erigeron canadensis HOM05D003495 ORTHO05D004159 0.0e+00 3182.5 1983 80.4
Solyc03g046450.3 Solanum lycopersicum HOM05D003495 ORTHO05D004159 0.0e+00 3177.9 1980 80.5
HanXRQChr15g0489851 Helianthus annuus HOM05D003495 ORTHO05D004159 0.0e+00 3176.0 1985 80.1
PSO063G5616 Papaver somniferum HOM05D003495 ORTHO05D004159 0.0e+00 3102.4 1987 78.6
Ca_20758_v3 Cicer arietinum L. HOM05D003495 ORTHO05D004159 0.0e+00 2905.9 1658 86.1
Zm00001eb190620 Zea mays HOM05D003495 ORTHO05D004159 0.0e+00 2848.9 1994 71.7
ATR0618G126 Amborella trichopoda HOM05D003495 ORTHO05D004159 0.0e+00 2834.7 1994 72.7
CDE04G3053 Ceratophyllum demersum HOM05D003495 ORTHO05D004159 0.0e+00 2823.5 1988 72.5
Oeu032840.1 Olea europaea HOM05D003495 ORTHO05D004159 0.0e+00 2787.7 1824 77.2
ECA238G4655 Erigeron canadensis HOM05D003495 ORTHO05D004159 0.0e+00 2775.3 1988 71.2
SGA_v2.0_scaffold148G36460 Striga asiatica HOM05D003495 ORTHO05D004159 0.0e+00 2742.6 1686 81.6
SEGI_22880 Sequoiadendron giganteum HOM05D003495 ORTHO05D004159 0.0e+00 2723.0 2059 69.2
HanXRQChr14g0447961 Helianthus annuus HOM05D003495 ORTHO05D004159 0.0e+00 2715.3 1989 70.2
Lsat_1_v5_gn_2_85980 Lactuca sativa HOM05D003495 ORTHO05D004159 0.0e+00 2679.8 1994 69.0
FAN14G3604 Fragaria x ananassa HOM05D003495 ORTHO05D004159 0.0e+00 2640.5 1522 85.7
Mapoly0124s0011 Marchantia polymorpha HOM05D003495 ORTHO05D004159 0.0e+00 2551.5 2068 64.9
Solyc02g089370.2 Solanum lycopersicum HOM05D003495 ORTHO05D004159 0.0e+00 2543.1 1460 85.2
SMO351G0561 Selaginella moellendorffii HOM05D003495 ORTHO05D004159 0.0e+00 2471.8 2000 65.1
AagrBONN_evm.TU.Sc2ySwM_228.311 Anthoceros agrestis HOM05D003495 ORTHO05D004159 0.0e+00 2441.8 2070 62.4
Pp3c12_3160 Physcomitrium patens HOM05D003495 ORTHO05D004159 0.0e+00 2309.3 2081 59.7
VMungo0464G1145 Vigna mungo HOM05D003495 ORTHO05D004159 0.0e+00 2300.4 1393 82.8
Pp3c13_5370 Physcomitrium patens HOM05D003495 ORTHO05D004159 0.0e+00 2288.5 2063 59.3
Pp3c3_1860 Physcomitrium patens HOM05D003495 ORTHO05D004159 0.0e+00 2280.4 2069 59.1
CiPaw.03G081100 Carya illinoinensis HOM05D003495 ORTHO05D004159 0.0e+00 2226.1 1278 87.4
unitig_748.g7269 Utricularia gibba HOM05D003495 ORTHO05D004159 0.0e+00 2164.4 1371 80.5
Gohir.A01G142600 Gossypium hirsutum HOM05D003495 ORTHO05D004159 0.0e+00 2153.6 1312 82.5
Gohir.D01G134500 Gossypium hirsutum HOM05D003495 ORTHO05D004159 0.0e+00 2075.8 1275 82.1
Lsat_1_v5_gn_4_173941 Lactuca sativa HOM05D003495 ORTHO05D004159 0.0e+00 1991.5 1193 81.8
COL.COLO4_24186 Corchorus olitorius HOM05D003495 ORTHO05D004159 0.0e+00 1941.8 1315 76.7
HPP92_025565 Vanilla planifolia HOM05D003495 ORTHO05D004159 0.0e+00 1932.9 1299 75.0
Hund20735 Selenicereus undatus HOM05D003495 ORTHO05D004159 0.0e+00 1904.4 1281 76.4
CBR_g31516 Chara braunii HOM05D003495 ORTHO05D004159 0.0e+00 1765.4 2168 47.1
Gohir.D02G161820 Gossypium hirsutum HOM05D003495 ORTHO05D004159 0.0e+00 1749.9 1005 87.9
Gohir.D02G161860 Gossypium hirsutum HOM05D003495 ORTHO05D004159 0.0e+00 1597.4 948 82.4
Nn7g37976 Nelumbo nucifera HOM05D003495 ORTHO05D004159 0.0e+00 1597.4 961 80.9
SHI33626 Sapria himalayana HOM05D003495 ORTHO05D004159 0.0e+00 1453.0 1031 73.1
Nitab4.5_0001397g0040 Nicotiana tabacum HOM05D003495 ORTHO05D004159 0.0e+00 1313.9 2024 42.1
arahy.Tifrunner.gnm1.ann1.BVET7T Arachis hypogaea HOM05D003495 ORTHO05D004159 0.0e+00 1199.5 701 83.5
Lsat_1_v5_gn_4_173921 Lactuca sativa HOM05D003495 ORTHO05D004159 1.8e-293 1013.8 670 78.1
VMungo0464G0617 Vigna mungo HOM05D003495 ORTHO05D004159 8.2e-283 978.4 587 83.6
unitig_748.g7268 Utricularia gibba HOM05D003495 ORTHO05D004159 5.7e-268 929.1 587 77.3
CSS0011723 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D004159 2.6e-257 893.6 592 76.9
HPP92_025566 Vanilla planifolia HOM05D003495 ORTHO05D004159 4.7e-246 856.3 586 73.4
Os02g0830801 Oryza sativa ssp. japonica HOM05D003495 ORTHO05D004159 7.5e-244 849.0 587 70.9
Hund20736 Selenicereus undatus HOM05D003495 ORTHO05D004159 2.8e-230 803.9 548 72.8
RcHm_v2.0_Chr2g0117981 Rosa chinensis HOM05D003495 ORTHO05D004159 3.0e-192 677.6 386 85.2
COL.COLO4_24184 Corchorus olitorius HOM05D003495 ORTHO05D004159 1.3e-184 652.1 380 86.6
RcHm_v2.0_Chr2g0117961 Rosa chinensis HOM05D003495 ORTHO05D004159 1.5e-175 622.1 348 89.7
Actinidia36276 Actinidia chinensis HOM05D003495 ORTHO05D004159 2.6e-156 558.1 323 83.3
Nitab4.5_0000154g0080 Nicotiana tabacum HOM05D003495 ORTHO05D004159 2.3e-152 545.0 310 85.5
Nitab4.5_0000154g0090 Nicotiana tabacum HOM05D003495 ORTHO05D004159 1.3e-150 539.3 384 73.7
Cre17.g703750 Chlamydomonas reinhardtii HOM05D003495 ORTHO05D004159 2.2e-142 511.9 2072 25.2
Actinidia36277 Actinidia chinensis HOM05D003495 ORTHO05D004159 3.2e-130 471.5 313 71.2
RcHm_v2.0_Chr2g0117951 Rosa chinensis HOM05D003495 ORTHO05D004159 1.4e-125 456.1 306 77.1
Os02g0830900 Oryza sativa ssp. japonica HOM05D003495 ORTHO05D004159 2.6e-119 435.3 376 63.0
CAN.G497.63 Capsicum annuum HOM05D003495 ORTHO05D004159 1.2e-105 389.8 643 44.3
Hma1.2p1_2186F.1_g316380 Hydrangea macrophylla HOM05D003495 ORTHO05D004159 6.0e-100 370.9 297 66.0
CiPaw.03G081200 Carya illinoinensis HOM05D003495 ORTHO05D004159 5.1e-91 341.3 191 86.4
SHI33624 Sapria himalayana HOM05D003495 ORTHO05D004159 5.1e-91 341.3 259 67.6
CAN.G497.69 Capsicum annuum HOM05D003495 ORTHO05D004159 1.1e-90 340.1 396 52.0
CAN.G497.62 Capsicum annuum HOM05D003495 ORTHO05D004159 1.1e-88 333.6 413 50.6
Ca_20757_v3 Cicer arietinum L. HOM05D003495 ORTHO05D004159 1.4e-69 270.0 212 67.9
SEGI_11817 Sequoiadendron giganteum HOM05D003495 ORTHO05D004159 2.1e-65 256.1 319 51.1
MCO10G374 Micromonas commoda HOM05D003495 ORTHO05D004159 2.8e-65 255.8 1738 22.6
CAN.G497.66 Capsicum annuum HOM05D003495 ORTHO05D004159 6.9e-64 251.1 490 35.5
CSS0034486 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D011845 1.3e-59 236.9 139 74.1
CSS0017914 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D011845 3.9e-59 235.3 139 73.4
SHI33618 Sapria himalayana HOM05D003495 ORTHO05D004159 5.5e-53 214.9 169 63.9
Hund20737 Selenicereus undatus HOM05D003495 ORTHO05D004159 2.4e-48 199.5 118 78.8
Solyc02g089390.3 Solanum lycopersicum HOM05D003495 ORTHO05D004159 3.1e-48 199.1 151 70.9
Actinidia36278 Actinidia chinensis HOM05D003495 ORTHO05D004159 4.1e-48 198.7 232 53.4
CSS0030310 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D011845 5.1e-43 181.8 139 59.0
CAN.G497.67 Capsicum annuum HOM05D003495 ORTHO05D004159 2.2e-41 176.4 103 80.6
Psat5g191680 Pisum sativum HOM05D003495 ORTHO05D004159 6.9e-40 171.4 114 77.2
SHI33623 Sapria himalayana HOM05D003495 ORTHO05D004159 2.2e-38 166.4 111 69.4
Psat6g133600 Pisum sativum HOM05D003495 ORTHO05D004159 3.8e-38 165.6 141 67.4
CAN.G497.68 Capsicum annuum HOM05D003495 ORTHO05D015025 1.6e-36 160.2 146 61.6
Psat1g055400 Pisum sativum HOM05D003495 ORTHO05D004159 2.2e-25 123.2 93 65.6
CAN.G497.59 Capsicum annuum HOM05D003495 ORTHO05D004159 5.0e-22 112.1 69 76.8
EL10Ac5g11417 Beta vulgaris HOM05D003495 ORTHO05D004159 2.5e-21 109.8 64 76.6
Actinidia36279 Actinidia chinensis HOM05D003495 ORTHO05D004159 9.4e-21 107.8 178 41.0
Lsat_1_v5_gn_4_36641 Lactuca sativa HOM05D001412 ORTHO05D002473 1.2e-15 90.9 53 75.5
Cfa023482 Carpinus fangiana HOM05D003495 ORTHO05D125175 8.8e-11 74.7 331 23.0
BcaB08g36895 Brassica carinata HOM05D003495 ORTHO05D004159 1.5e-10 73.9 40 90.0
arahy.Tifrunner.gnm1.ann1.7VHQ3C Arachis hypogaea HOM05D000394 ORTHO05D013471 3.5e-07 62.8 38 84.2


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