Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p02280 Brassica napus HOM05D004735 ORTHO05D005243 1.2e-64 249.6 122 100.0
BolC3t13230H Brassica oleracea HOM05D004735 ORTHO05D005243 4.9e-21 104.8 208 34.1
Sp6g30050 Schrenkiella parvula HOM05D004735 ORTHO05D005243 4.9e-21 104.8 209 35.4
BolC9t59152H Brassica oleracea HOM05D004735 ORTHO05D005243 1.4e-20 103.2 210 34.8
C03p07280 Brassica napus HOM05D004735 ORTHO05D005243 1.9e-20 102.8 208 33.7
A10p24440 Brassica napus HOM05D004735 ORTHO05D005243 4.2e-20 101.7 210 34.3
C09p63170 Brassica napus HOM05D004735 ORTHO05D005243 1.2e-19 100.1 210 33.8
Thhalv10012594m.g Eutrema salsugineum HOM05D004735 ORTHO05D005243 6.6e-18 94.4 56 73.2
CARHR199450 Cardamine hirsuta HOM05D004735 ORTHO05D005243 8.7e-18 94.0 56 71.4
BcaB01g05325 Brassica carinata HOM05D004735 ORTHO05D005243 1.5e-17 93.2 55 70.9
THA.LOC104802362 Tarenaya hassleriana HOM05D004735 ORTHO05D005243 4.3e-17 91.7 62 64.5
AT5G13950 Arabidopsis thaliana HOM05D004735 ORTHO05D005243 7.3e-17 90.9 55 70.9
AL6G24610 Arabidopsis lyrata HOM05D004735 ORTHO05D005243 9.6e-17 90.5 56 69.6
Aa31LG11G15430 Aethionema arabicum HOM05D004735 ORTHO05D005243 1.3e-16 90.1 57 68.4
BraA02t05200Z Brassica rapa HOM05D000139 ORTHO05D000103 1.6e-16 89.7 48 91.7
Carub.0006s1214 Capsella rubella HOM05D004735 ORTHO05D005243 2.8e-16 89.0 55 70.9
THA.LOC104821139 Tarenaya hassleriana HOM05D004735 ORTHO05D005243 3.4e-14 82.0 55 65.5
Manes.11G076100 Manihot esculenta HOM05D004735 ORTHO05D005243 6.4e-13 77.8 60 55.0
TWI32G0607 Tripterygium wilfordii HOM05D004735 ORTHO05D005243 1.4e-12 76.6 57 56.1
Manes.04G093600 Manihot esculenta HOM05D004735 ORTHO05D005243 1.9e-12 76.3 60 53.3
Hund12196 Selenicereus undatus HOM05D004735 ORTHO05D005243 1.9e-12 76.3 57 54.4
Actinidia19551 Actinidia chinensis HOM05D004735 ORTHO05D005243 4.2e-12 75.1 60 50.0
Actinidia37716 Actinidia chinensis HOM05D004735 ORTHO05D005243 4.2e-12 75.1 57 52.6
Nn4g22117 Nelumbo nucifera HOM05D004735 ORTHO05D005243 4.2e-12 75.1 57 57.9
PGR042G1405 Punica granatum HOM05D004735 ORTHO05D005243 5.4e-12 74.7 116 37.1
Duzib147G0188 Durio zibethinus HOM05D004735 ORTHO05D005243 1.2e-11 73.6 54 57.4
Duzib187G1028 Durio zibethinus HOM05D004735 ORTHO05D005243 1.2e-11 73.6 57 54.4
Lsat_1_v5_gn_3_104900 Lactuca sativa HOM05D004735 ORTHO05D005243 1.6e-11 73.2 57 50.9
Lj7A617T73 Lonicera japonica HOM05D004735 ORTHO05D005243 1.6e-11 73.2 51 60.8
CANSAT64G0702 Cannabis sativa HOM05D004735 ORTHO05D005243 2.1e-11 72.8 57 49.1
SEGI_21903 Sequoiadendron giganteum HOM05D004735 ORTHO05D005243 2.7e-11 72.4 55 49.1
vmacro18383 Vaccinium macrocarpon HOM05D004735 ORTHO05D005243 2.7e-11 72.4 53 56.6
CSS0050200 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 3.5e-11 72.0 53 52.8
GSVIVG01032979001 Vitis vinifera HOM05D004735 ORTHO05D005243 3.5e-11 72.0 57 54.4
Gohir.A10G069900 Gossypium hirsutum HOM05D004735 ORTHO05D005243 4.6e-11 71.6 54 55.6
Gohir.D10G081300 Gossypium hirsutum HOM05D004735 ORTHO05D005243 4.6e-11 71.6 54 55.6
Gorai.011G088500 Gossypium raimondii HOM05D004735 ORTHO05D005243 4.6e-11 71.6 54 55.6
Cc07_g01340 Coffea canephora HOM05D004735 ORTHO05D005243 1.0e-10 70.5 54 53.7
Thecc.04G048500 Theobroma cacao HOM05D004735 ORTHO05D005243 1.0e-10 70.5 54 55.6
Migut.F00010 Erythranthe guttata HOM05D004735 ORTHO05D005243 1.3e-10 70.1 57 47.4
PSO017G6705 Papaver somniferum HOM05D004735 ORTHO05D005243 1.3e-10 70.1 62 48.4
PSO478G1205 Papaver somniferum HOM05D004735 ORTHO05D005243 1.3e-10 70.1 62 48.4
Dinv33275 Davidia involucrata HOM05D004735 ORTHO05D005243 1.8e-10 69.7 51 58.8
FvH4_6g54340 Fragaria vesca HOM05D004735 ORTHO05D005243 1.8e-10 69.7 55 50.9
CDE06G2773 Ceratophyllum demersum HOM05D004735 ORTHO05D005243 2.3e-10 69.3 55 56.4
Duzib264G0086 Durio zibethinus HOM05D004735 ORTHO05D005243 2.3e-10 69.3 55 50.9
Oeu035383.1 Olea europaea HOM05D004735 ORTHO05D005243 2.3e-10 69.3 57 52.6
RcHm_v2.0_Chr2g0176561 Rosa chinensis HOM05D004735 ORTHO05D005243 2.3e-10 69.3 57 49.1
TWI60G1686 Tripterygium wilfordii HOM05D004735 ORTHO05D005243 2.3e-10 69.3 54 55.6
HanXRQChr17g0550891 Helianthus annuus HOM05D004735 ORTHO05D005243 3.0e-10 68.9 57 47.4
CSS0009135 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 3.9e-10 68.6 51 52.9
CDE02G4423 Ceratophyllum demersum HOM05D004735 ORTHO05D005243 3.9e-10 68.6 51 60.8
Potri.014G144100 Populus trichocarpa HOM05D004735 ORTHO05D005243 3.9e-10 68.6 57 47.4
ATR0582G141 Amborella trichopoda HOM05D004735 ORTHO05D005243 5.1e-10 68.2 58 46.6
CiPaw.04G001000 Carya illinoinensis HOM05D004735 ORTHO05D005243 5.1e-10 68.2 55 47.3
AUR62038220 Chenopodium quinoa HOM05D004735 ORTHO05D005243 5.1e-10 68.2 57 47.4
Eucgr.G01927 Eucalyptus grandis HOM05D004735 ORTHO05D005243 5.1e-10 68.2 102 32.4
SalBow4G2972 Salvia bowleyana HOM05D004735 ORTHO05D005243 5.1e-10 68.2 52 51.9
TAR371G0169 Trochodendron aralioides HOM05D004735 ORTHO05D008917 5.1e-10 68.2 57 50.9
arahy.Tifrunner.gnm1.ann1.HAHJ6R Arachis hypogaea HOM05D004735 ORTHO05D005243 6.7e-10 67.8 57 47.4
arahy.Tifrunner.gnm1.ann1.X964XN Arachis hypogaea HOM05D004735 ORTHO05D005243 6.7e-10 67.8 57 47.4
Prupe.3G314000 Prunus persica HOM05D004735 ORTHO05D005243 6.7e-10 67.8 57 50.9
QL02p069299 Quercus lobata HOM05D004735 ORTHO05D005243 6.7e-10 67.8 117 33.3
Ca_16589_v3 Cicer arietinum L. HOM05D004735 ORTHO05D005243 8.7e-10 67.4 57 47.4
ECA246G4565 Erigeron canadensis HOM05D004735 ORTHO05D005243 8.7e-10 67.4 69 44.9
Atru.chr6.2700 Acer truncatum HOM05D004735 ORTHO05D005243 1.1e-09 67.0 49 55.1
CiPaw.03G001400 Carya illinoinensis HOM05D004735 ORTHO05D005243 1.1e-09 67.0 75 42.7
FAN09G0836 Fragaria x ananassa HOM05D004735 ORTHO05D005243 1.1e-09 67.0 51 54.9
FAN14G4878 Fragaria x ananassa HOM05D004735 ORTHO05D005243 1.1e-09 67.0 51 54.9
Peaxi162Scf00420g00843 Petunia axillaris HOM05D004735 ORTHO05D005243 1.1e-09 67.0 54 53.7
Solyc02g094530.1 Solanum lycopersicum HOM05D004735 ORTHO05D005243 1.1e-09 67.0 55 50.9
Hma1.2p1_0421F.1_g149860 Hydrangea macrophylla HOM05D004735 ORTHO05D005243 1.5e-09 66.6 57 47.4
Medtr7g084170 Medicago truncatula HOM05D004735 ORTHO05D005243 1.5e-09 66.6 57 47.4
CSS0035487 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 1.9e-09 66.2 53 50.9
Cpa.g.sc70.59 Carica papaya HOM05D004735 ORTHO05D005243 1.9e-09 66.2 49 53.1
Dinv25616 Davidia involucrata HOM05D004735 ORTHO05D005243 1.9e-09 66.2 54 51.9
Gohir.D11G068200 Gossypium hirsutum HOM05D004735 ORTHO05D005243 1.9e-09 66.2 78 38.5
Gorai.007G073000 Gossypium raimondii HOM05D004735 ORTHO05D005243 1.9e-09 66.2 78 38.5
Sabra14G0108800 Salix brachista HOM05D004735 ORTHO05D005243 1.9e-09 66.2 57 47.4
Sc03g0005270 Simmondsia chinensis HOM05D004735 ORTHO05D005243 1.9e-09 66.2 57 49.1
AUR62030086 Chenopodium quinoa HOM05D004735 ORTHO05D005243 2.5e-09 65.9 57 47.4
HanXRQChr15g0475721 Helianthus annuus HOM05D004735 ORTHO05D005243 3.3e-09 65.5 57 45.6
Sopen02g039210 Solanum pennellii HOM05D004735 ORTHO05D005243 3.3e-09 65.5 55 50.9
TPR.G30897 Trifolium pratense HOM05D004735 ORTHO05D005243 3.3e-09 65.5 57 47.4
FAN02G4354 Fragaria x ananassa HOM05D004735 ORTHO05D005243 4.3e-09 65.1 51 52.9
FAN05G2416 Fragaria x ananassa HOM05D004735 ORTHO05D005243 4.3e-09 65.1 51 52.9
CAN.G473.160 Capsicum annuum HOM05D004735 ORTHO05D005243 5.6e-09 64.7 49 55.1
Lj2g0010549 Lotus japonicus HOM05D004735 ORTHO05D005243 7.4e-09 64.3 57 45.6
Medtr6g033235 Medicago truncatula HOM05D004735 ORTHO05D005243 7.4e-09 64.3 57 45.6
Ah.13g074210 Amaranthus hybridus HOM05D004735 ORTHO05D005243 9.6e-09 63.9 75 40.0
MSTRG.24121 Avicennia marina HOM05D004735 ORTHO05D005243 1.3e-08 63.5 54 46.3
Psat0s787g0080 Pisum sativum HOM05D004735 ORTHO05D005243 1.3e-08 63.5 82 40.2
Glyma.02G066700 Glycine max HOM05D004735 ORTHO05D005243 1.6e-08 63.2 54 48.1
Lalb_Chr22g0359841 Lupinus albus HOM05D004735 ORTHO05D005243 1.6e-08 63.2 57 42.1
Nitab4.5_0002172g0170 Nicotiana tabacum HOM05D004735 ORTHO05D005243 1.6e-08 63.2 47 57.4
Potri.002G237800 Populus trichocarpa HOM05D004735 ORTHO05D005243 1.6e-08 63.2 57 45.6
Sabra02G0181300 Salix brachista HOM05D004735 ORTHO05D005243 1.6e-08 63.2 55 49.1
Lj1g0021966 Lotus japonicus HOM05D004735 ORTHO05D005243 2.1e-08 62.8 55 45.5
Psat3g093080 Pisum sativum HOM05D004735 ORTHO05D005243 2.1e-08 62.8 57 43.9
Haze_14980 Corylus avellana HOM05D004735 ORTHO05D005243 2.8e-08 62.4 49 51.0
MD17G1006400 Malus domestica HOM05D004735 ORTHO05D005243 2.8e-08 62.4 57 49.1
Ah.07g203970 Amaranthus hybridus HOM05D004735 ORTHO05D005243 3.7e-08 62.0 55 45.5
Cfa007143 Carpinus fangiana HOM05D004735 ORTHO05D005243 3.7e-08 62.0 49 51.0
TPR.G15417 Trifolium pratense HOM05D004735 ORTHO05D005243 3.7e-08 62.0 57 42.1
MBI07_g13942_MAGBIO Magnolia biondii HOM05D004735 ORTHO05D005243 4.8e-08 61.6 89 38.2
Zm00001eb307010 Zea mays HOM05D004735 ORTHO05D005243 4.8e-08 61.6 57 45.6
Nitab4.5_0000519g0300 Nicotiana tabacum HOM05D004735 ORTHO05D005243 6.2e-08 61.2 47 55.3
SGA_v2.0_scaffold423G51443 Striga asiatica HOM05D004735 ORTHO05D005243 8.1e-08 60.8 54 42.6
VMungo0464G0888 Vigna mungo HOM05D004735 ORTHO05D005243 8.1e-08 60.8 57 45.6
MD09G1002200 Malus domestica HOM05D004735 ORTHO05D005243 1.1e-07 60.5 57 43.9
Gohir.A11G063866 Gossypium hirsutum HOM05D004735 ORTHO05D005243 1.4e-07 60.1 56 46.4
SHI13678 Sapria himalayana HOM05D004735 ORTHO05D005243 2.4e-07 59.3 55 45.5
Lalb_Chr02g0156851 Lupinus albus HOM05D004735 ORTHO05D005243 3.1e-07 58.9 57 42.1
C02p06510 Brassica napus HOM05D000139 ORTHO05D000103 4.0e-07 58.5 56 55.4
Glyma.16G147800 Glycine max HOM05D004735 ORTHO05D005243 6.9e-07 57.8 54 46.3
Lalb_Chr21g0316971 Lupinus albus HOM05D004735 ORTHO05D005243 6.9e-07 57.8 57 38.6
Oeu035273.1 Olea europaea HOM05D004735 ORTHO05D005243 6.9e-07 57.8 44 56.8
Phvul.004G069600 Phaseolus vulgaris HOM05D004735 ORTHO05D005243 6.9e-07 57.8 57 42.1
BolC2t06598H Brassica oleracea HOM05D000139 ORTHO05D000103 1.2e-06 57.0 56 53.6


User provided reference genes

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