Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p02180 Brassica napus HOM05D002214 ORTHO05D005113 1.9e-58 229.2 135 100.0
BcaNung04185 Brassica carinata HOM05D002214 ORTHO05D005113 4.7e-57 224.6 136 99.3
C02p06430 Brassica napus HOM05D002214 ORTHO05D005113 4.7e-57 224.6 136 99.3
BolC2t06589H Brassica oleracea HOM05D002214 ORTHO05D005113 4.7e-57 224.6 136 99.3
Sp6g30240 Schrenkiella parvula HOM05D002214 ORTHO05D005113 2.7e-52 208.8 135 87.4
BcaC08g43425 Brassica carinata HOM05D002214 ORTHO05D005113 7.8e-52 207.2 141 91.5
AL6G24400 Arabidopsis lyrata HOM05D002214 ORTHO05D005113 5.0e-51 204.5 132 93.9
BcaNung04183 Brassica carinata HOM05D002214 ORTHO05D005113 5.0e-51 204.5 137 90.5
AT5G13780 Arabidopsis thaliana HOM05D002214 ORTHO05D005113 8.6e-51 203.8 132 93.9
Carub.0006s1196 Capsella rubella HOM05D002214 ORTHO05D005113 1.5e-50 203.0 132 93.2
Thhalv10014756m.g Eutrema salsugineum HOM05D002214 ORTHO05D005113 2.5e-50 202.2 132 90.9
CARHR199660 Cardamine hirsuta HOM05D002214 ORTHO05D005113 3.3e-50 201.8 132 91.7
BcaC04g19081 Brassica carinata HOM05D002214 ORTHO05D005113 6.2e-49 197.6 135 83.0
Aa31sc919G10 Aethionema arabicum HOM05D002214 ORTHO05D005113 1.4e-48 196.4 132 90.2
BolC9t59169H Brassica oleracea HOM05D002214 ORTHO05D005113 1.4e-48 196.4 135 82.2
BcaC04g24254 Brassica carinata HOM05D002214 ORTHO05D005113 8.9e-48 193.7 137 85.4
THA.LOC104819106 Tarenaya hassleriana HOM05D002214 ORTHO05D005113 2.2e-46 189.1 133 87.2
Cpa.g.sc125.49 Carica papaya HOM05D002214 ORTHO05D005113 2.9e-46 188.7 134 82.1
THA.LOC104809846 Tarenaya hassleriana HOM05D002214 ORTHO05D005113 3.7e-46 188.3 131 85.5
Atru.chr11.2514 Acer truncatum HOM05D002214 ORTHO05D005113 4.9e-46 188.0 98 92.9
Manes.10G136000 Manihot esculenta HOM05D002214 ORTHO05D005113 1.1e-45 186.8 121 90.9
PSO339G1526 Papaver somniferum HOM05D002214 ORTHO05D005113 3.2e-45 185.3 98 91.8
PSO384G1143 Papaver somniferum HOM05D002214 ORTHO05D005113 3.2e-45 185.3 98 91.8
Ca_27724_v3 Cicer arietinum L. HOM05D002214 ORTHO05D005113 5.4e-45 184.5 118 88.1
Manes.07G010700 Manihot esculenta HOM05D002214 ORTHO05D005113 1.2e-44 183.3 97 92.8
CSS0031731 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D005113 1.6e-44 183.0 98 92.9
Lj3g0001707 Lotus japonicus HOM05D002214 ORTHO05D005113 2.7e-44 182.2 97 91.8
Ciclev10032739m.g Citrus clementina HOM05D002214 ORTHO05D005113 3.5e-44 181.8 140 80.7
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 3.5e-44 181.8 97 91.8
Thecc.01G406300 Theobroma cacao HOM05D002214 ORTHO05D005113 3.5e-44 181.8 136 82.4
TPR.G14549 Trifolium pratense HOM05D002214 ORTHO05D005113 4.6e-44 181.4 97 90.7
TWI53G0951 Tripterygium wilfordii HOM05D002214 ORTHO05D005113 4.6e-44 181.4 97 92.8
TWI53G1910 Tripterygium wilfordii HOM05D002214 ORTHO05D005113 4.6e-44 181.4 97 92.8
ClCG09G004420 Citrullus lanatus HOM05D002214 ORTHO05D005113 6.0e-44 181.0 97 91.8
MELO3C023584.2 Cucumis melo HOM05D002214 ORTHO05D005113 6.0e-44 181.0 97 91.8
CsaV3_7G030720 Cucumis sativus L. HOM05D002214 ORTHO05D005113 6.0e-44 181.0 97 91.8
Duzib133G1108 Durio zibethinus HOM05D002214 ORTHO05D005113 6.0e-44 181.0 137 81.0
CiPaw.13G008000 Carya illinoinensis HOM05D002214 ORTHO05D005113 7.8e-44 180.6 98 89.8
Potri.009G056600 Populus trichocarpa HOM05D002214 ORTHO05D005113 7.8e-44 180.6 97 91.8
PGR031G1630 Punica granatum HOM05D002214 ORTHO05D005113 7.8e-44 180.6 134 81.3
Eucgr.J01208 Eucalyptus grandis HOM05D002214 ORTHO05D005113 1.3e-43 179.9 97 91.8
Medtr3g034200 Medicago truncatula HOM05D002214 ORTHO05D005113 1.3e-43 179.9 97 90.7
Sabra16G0160600 Salix brachista HOM05D002214 ORTHO05D005113 1.3e-43 179.9 133 82.7
Cc02_g28810 Coffea canephora HOM05D002214 ORTHO05D005113 1.7e-43 179.5 98 90.8
Lj9A641T66 Lonicera japonica HOM05D002214 ORTHO05D005113 1.7e-43 179.5 129 85.3
Lalb_Chr04g0263831 Lupinus albus HOM05D002214 ORTHO05D005113 1.7e-43 179.5 131 84.0
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 2.3e-43 179.1 98 90.8
TWI09G0624 Tripterygium wilfordii HOM05D002214 ORTHO05D005113 2.3e-43 179.1 97 90.7
unitig_37.g12366 Utricularia gibba HOM05D002214 ORTHO05D005113 2.3e-43 179.1 97 91.8
CANSAT80G0460 Cannabis sativa HOM05D002214 ORTHO05D005113 3.0e-43 178.7 97 89.7
Psat5g212520 Pisum sativum HOM05D002214 ORTHO05D005113 3.0e-43 178.7 96 90.6
VMungo1080G0077 Vigna mungo HOM05D002214 ORTHO05D005113 3.0e-43 178.7 97 89.7
Ah.10g038600 Amaranthus hybridus HOM05D002214 ORTHO05D005113 3.9e-43 178.3 97 89.7
FvH4_7g01790 Fragaria vesca HOM05D002214 ORTHO05D005113 3.9e-43 178.3 139 77.0
FAN03G0770 Fragaria x ananassa HOM05D002214 ORTHO05D005113 3.9e-43 178.3 139 77.0
FAN10G3956 Fragaria x ananassa HOM05D002214 ORTHO05D005113 3.9e-43 178.3 139 77.0
Prupe.2G024200 Prunus persica HOM05D002214 ORTHO05D005113 3.9e-43 178.3 97 89.7
QL04p010049 Quercus lobata HOM05D002214 ORTHO05D005113 3.9e-43 178.3 97 90.7
Sed0009169 Sechium edule HOM05D002214 ORTHO05D005113 6.6e-43 177.6 97 90.7
MSTRG.17006 Avicennia marina HOM05D002214 ORTHO05D005113 8.6e-43 177.2 98 88.8
Gohir.A11G135400 Gossypium hirsutum HOM05D002214 ORTHO05D005113 8.6e-43 177.2 97 89.7
Rhsim01G0125000 Rhododendron simsii HOM05D002214 ORTHO05D005113 8.6e-43 177.2 97 89.7
Sc11g0009030 Simmondsia chinensis HOM05D002214 ORTHO05D005113 8.6e-43 177.2 135 75.6
CiPaw.14G003300 Carya illinoinensis HOM05D002214 ORTHO05D005113 1.1e-42 176.8 98 89.8
Nn2g15193 Nelumbo nucifera HOM05D002214 ORTHO05D005113 1.1e-42 176.8 97 90.7
RcHm_v2.0_Chr1g0318401 Rosa chinensis HOM05D002214 ORTHO05D005113 1.1e-42 176.8 97 89.7
SGA_v2.0_scaffold119G32765 Striga asiatica HOM05D002214 ORTHO05D005113 1.1e-42 176.8 95 91.6
FAN01G2033 Fragaria x ananassa HOM05D002214 ORTHO05D005113 1.5e-42 176.4 139 76.3
Phvul.011G183200 Phaseolus vulgaris HOM05D002214 ORTHO05D005113 1.5e-42 176.4 95 91.6
Sabra09G0041400 Salix brachista HOM05D002214 ORTHO05D005113 1.5e-42 176.4 97 89.7
SalBow6G0878 Salvia bowleyana HOM05D002214 ORTHO05D005113 1.5e-42 176.4 130 83.8
Cfa010811 Carpinus fangiana HOM05D002214 ORTHO05D005113 1.9e-42 176.0 94 92.6
Haze_03145 Corylus avellana HOM05D002214 ORTHO05D005113 1.9e-42 176.0 94 92.6
Haze_03148 Corylus avellana HOM05D002214 ORTHO05D005113 1.9e-42 176.0 94 92.6
MBI19_g12816_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D005113 1.9e-42 176.0 132 81.8
MD07G1023300 Malus domestica HOM05D002214 ORTHO05D005113 1.9e-42 176.0 97 88.7
TAR623G1010 Trochodendron aralioides HOM05D002214 ORTHO05D005113 1.9e-42 176.0 95 91.6
DCAR_003226 Daucus carota HOM05D002214 ORTHO05D005113 2.5e-42 175.6 118 78.8
MD02G1300400 Malus domestica HOM05D002214 ORTHO05D005113 2.5e-42 175.6 97 88.7
Sed0022614 Sechium edule HOM05D002214 ORTHO05D005113 2.5e-42 175.6 97 87.6
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 4.3e-42 174.9 129 78.3
Glyma.04G142300 Glycine max HOM05D002214 ORTHO05D005113 4.3e-42 174.9 95 90.5
Glyma.11G159648 Glycine max HOM05D002214 ORTHO05D005113 4.3e-42 174.9 95 90.5
VMungo1127G0768 Vigna mungo HOM05D002214 ORTHO05D005113 4.3e-42 174.9 95 90.5
Duzib138G1825 Durio zibethinus HOM05D002214 ORTHO05D005113 5.6e-42 174.5 97 87.6
Lsat_1_v5_gn_6_74341 Lactuca sativa HOM05D002214 ORTHO05D005113 5.6e-42 174.5 97 87.6
Gohir.D11G141700 Gossypium hirsutum HOM05D002214 ORTHO05D005113 7.3e-42 174.1 97 88.7
Gorai.007G152100 Gossypium raimondii HOM05D002214 ORTHO05D005113 7.3e-42 174.1 97 88.7
CDE08G0672 Ceratophyllum demersum HOM05D002214 ORTHO05D005113 9.5e-42 173.7 94 91.5
Migut.B01260 Erythranthe guttata HOM05D002214 ORTHO05D005113 9.5e-42 173.7 95 89.5
HanXRQChr08g0226841 Helianthus annuus HOM05D002214 ORTHO05D005113 9.5e-42 173.7 94 90.4
Hma1.2p1_2740F.1_g327740 Hydrangea macrophylla HOM05D002214 ORTHO05D005113 1.2e-41 173.3 95 89.5
Dinv43403 Davidia involucrata HOM05D002214 ORTHO05D005113 2.1e-41 172.6 93 91.4
HanXRQChr03g0082771 Helianthus annuus HOM05D002214 ORTHO05D005113 2.1e-41 172.6 97 87.6
Nitab4.5_0000087g0120 Nicotiana tabacum HOM05D002214 ORTHO05D005113 2.1e-41 172.6 129 81.4
Phvul.005G035200 Phaseolus vulgaris HOM05D002214 ORTHO05D005113 2.1e-41 172.6 95 88.4
Potri.001G261800 Populus trichocarpa HOM05D002214 ORTHO05D005113 2.1e-41 172.6 133 79.7
GSVIVG01032214001 Vitis vinifera HOM05D002214 ORTHO05D005113 2.1e-41 172.6 128 82.8
Lsat_1_v5_gn_6_17421 Lactuca sativa HOM05D002214 ORTHO05D005113 2.8e-41 172.2 94 89.4
Solyc01g087900.3 Solanum lycopersicum HOM05D002214 ORTHO05D005113 3.6e-41 171.8 130 81.5
Sopen01g034830 Solanum pennellii HOM05D002214 ORTHO05D005113 3.6e-41 171.8 130 81.5
ECA233G5526 Erigeron canadensis HOM05D002214 ORTHO05D005113 4.7e-41 171.4 118 83.9
Peaxi162Scf01270g00125 Petunia axillaris HOM05D002214 ORTHO05D005113 4.7e-41 171.4 130 80.8
Oeu047606.1 Olea europaea HOM05D002214 ORTHO05D005113 8.1e-41 170.6 130 81.5
Nitab4.5_0001244g0050 Nicotiana tabacum HOM05D002214 ORTHO05D005113 1.1e-40 170.2 95 87.4
TAR633G1565 Trochodendron aralioides HOM05D002214 ORTHO05D005113 1.1e-40 170.2 95 88.4
Aqoxy2G02029 Aquilegia oxysepala HOM05D002214 ORTHO05D005113 1.4e-40 169.9 95 87.4
CAN.G909.3 Capsicum annuum HOM05D002214 ORTHO05D005113 1.4e-40 169.9 95 87.4
PGSC0003DMG400006777 Solanum tuberosum HOM05D002214 ORTHO05D005113 1.4e-40 169.9 95 87.4
ATR0322G021 Amborella trichopoda HOM05D002214 ORTHO05D005113 2.3e-40 169.1 94 88.3
Nitab4.5_0008942g0030 Nicotiana tabacum HOM05D002214 ORTHO05D005113 2.3e-40 169.1 130 80.0
CDE02G0928 Ceratophyllum demersum HOM05D002214 ORTHO05D005113 3.1e-40 168.7 94 89.4
EL10Ac2g04370 Beta vulgaris HOM05D002214 ORTHO05D005113 4.0e-40 168.3 94 88.3
Nitab4.5_0001676g0100 Nicotiana tabacum HOM05D002214 ORTHO05D005113 6.8e-40 167.5 95 86.3
Aqoxy1G00322 Aquilegia oxysepala HOM05D002214 ORTHO05D005113 8.9e-40 167.2 95 85.3
SEGI_02460 Sequoiadendron giganteum HOM05D002214 ORTHO05D005113 8.9e-40 167.2 95 86.3
arahy.Tifrunner.gnm1.ann1.M3J26F Arachis hypogaea HOM05D002214 ORTHO05D005113 2.0e-39 166.0 120 73.3
MD02G1300500 Malus domestica HOM05D002214 ORTHO05D005113 2.0e-39 166.0 97 85.6
Sc11g0003930 Simmondsia chinensis HOM05D002214 ORTHO05D005113 2.0e-39 166.0 97 83.5
vmacro17359 Vaccinium macrocarpon HOM05D002214 ORTHO05D005113 3.4e-39 165.2 117 74.4
AagrBONN_evm.TU.Sc2ySwM_368.2201 Anthoceros agrestis HOM05D002214 ORTHO05D005113 5.8e-39 164.5 94 85.1
CBR_g48990 Chara braunii HOM05D002214 ORTHO05D005113 7.6e-39 164.1 95 85.3
Peaxi162Scf00071g01032 Petunia axillaris HOM05D002214 ORTHO05D005113 9.9e-39 163.7 95 84.2
Pp3c7_5970 Physcomitrium patens HOM05D002214 ORTHO05D005113 1.7e-38 162.9 92 85.9
Migut.N01799 Erythranthe guttata HOM05D002214 ORTHO05D005113 2.2e-38 162.5 98 82.7
Os04g0635800 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D005113 4.9e-38 161.4 96 85.4
arahy.Tifrunner.gnm1.ann1.0NW2H0 Arachis hypogaea HOM05D002214 ORTHO05D005113 6.4e-38 161.0 133 66.2
Zm00001eb069290 Zea mays HOM05D002214 ORTHO05D005113 1.9e-37 159.5 96 83.3
SMO137G0156 Selaginella moellendorffii HOM05D002214 ORTHO05D005113 3.2e-37 158.7 88 86.4
Zm00001eb431690 Zea mays HOM05D002214 ORTHO05D005113 3.2e-37 158.7 96 83.3
SGA_v2.0_scaffold4G02481 Striga asiatica HOM05D002214 ORTHO05D005113 4.1e-37 158.3 114 73.7
Mapoly0014s0153 Marchantia polymorpha HOM05D002214 ORTHO05D005113 9.2e-37 157.1 90 84.4
Oeu014596.2 Olea europaea HOM05D002214 ORTHO05D005113 2.1e-36 156.0 174 62.6
Lj7C576T11 Lonicera japonica HOM05D002214 ORTHO05D005113 1.3e-35 153.3 108 75.9
DCAR_022372 Daucus carota HOM05D002214 ORTHO05D005113 2.5e-34 149.1 94 79.8
Cre08.g364450 Chlamydomonas reinhardtii HOM05D002214 ORTHO05D005113 1.7e-30 136.3 89 73.0
PRCOL_00004224 Prasinoderma coloniale HOM05D002214 ORTHO05D005113 6.4e-30 134.4 89 74.2
MD07G1016300 Malus domestica HOM05D002214 ORTHO05D005113 4.2e-29 131.7 76 86.8
MD07G1016800 Malus domestica HOM05D002214 ORTHO05D005113 4.2e-29 131.7 76 86.8
MCO11G341 Micromonas commoda HOM05D002214 ORTHO05D005113 9.6e-26 120.6 87 69.0
arahy.Tifrunner.gnm1.ann1.13N2B5 Arachis hypogaea HOM05D002214 ORTHO05D005113 8.1e-25 117.5 75 80.0
Haze_26658 Corylus avellana HOM05D002214 ORTHO05D005113 1.1e-24 117.1 97 58.8
PSO384G1687 Papaver somniferum HOM05D002214 ORTHO05D005113 4.9e-22 108.2 95 60.0
HPP92_012859 Vanilla planifolia HOM05D002214 ORTHO05D005113 1.1e-21 107.1 96 65.6
PSO339G2935 Papaver somniferum HOM05D002214 ORTHO05D005113 2.4e-21 105.9 98 57.1
PSO384G2456 Papaver somniferum HOM05D002214 ORTHO05D005113 2.4e-21 105.9 98 58.2
Cfa022421 Carpinus fangiana HOM05D002214 ORTHO05D005113 1.2e-20 103.6 89 59.6
PSO339G2857 Papaver somniferum HOM05D002214 ORTHO05D005113 1.2e-20 103.6 95 56.8
PSO384G0821 Papaver somniferum HOM05D002214 ORTHO05D005113 1.2e-20 103.6 97 57.7
arahy.Tifrunner.gnm1.ann1.Y5766G Arachis hypogaea HOM05D002214 ORTHO05D009715 1.0e-19 100.5 61 75.4
arahy.Tifrunner.gnm1.ann1.F9QUKJ Arachis hypogaea HOM05D002214 ORTHO05D005113 1.8e-19 99.8 57 78.9
arahy.Tifrunner.gnm1.ann1.EWEG8C Arachis hypogaea HOM05D002214 ORTHO05D005113 2.3e-19 99.4 57 80.7
PSO384G3036 Papaver somniferum HOM05D002214 ORTHO05D005113 3.0e-19 99.0 91 57.1
PSO339G1308 Papaver somniferum HOM05D002214 ORTHO05D005113 5.1e-19 98.2 92 57.6
PSO339G3802 Papaver somniferum HOM05D002214 ORTHO05D005113 1.3e-17 93.6 88 56.8
PSO384G5131 Papaver somniferum HOM05D002214 ORTHO05D005113 1.3e-17 93.6 92 53.3
DCAR_022374 Daucus carota HOM05D002214 ORTHO05D005113 2.8e-17 92.4 63 73.0
PSO384G0095 Papaver somniferum HOM05D002214 ORTHO05D005113 3.6e-17 92.0 127 42.5
PSO384G2386 Papaver somniferum HOM05D002214 ORTHO05D005113 2.4e-16 89.4 81 59.3
Pp3c18_3810 Physcomitrium patens HOM05D002214 ORTHO05D005113 4.0e-16 88.6 69 65.2
A10p24570 Brassica napus HOM05D002214 ORTHO05D005113 1.1e-13 80.5 41 97.6
C09p63320 Brassica napus HOM05D002214 ORTHO05D005113 1.1e-13 80.5 41 97.6
Medtr3g030055 Medicago truncatula HOM05D002214 ORTHO05D005113 4.6e-12 75.1 95 47.4
unitig_46.g18668 Utricularia gibba HOM05D002214 ORTHO05D005113 1.6e-09 66.6 65 56.9
MCO07G257 Micromonas commoda HOM05D005702 ORTHO05D007080 4.8e-09 65.1 91 39.6
CBR_g41307 Chara braunii HOM05D005702 ORTHO05D007080 5.3e-08 61.6 89 41.6
Cre08.g383150 Chlamydomonas reinhardtii HOM05D005702 ORTHO05D007080 5.3e-08 61.6 91 39.6
SMO118G0064 Selaginella moellendorffii HOM05D005702 ORTHO05D007080 5.3e-08 61.6 81 43.2
Pp3c10_6780 Physcomitrium patens HOM05D005702 ORTHO05D007080 1.2e-07 60.5 97 36.1
PGR044G1983 Punica granatum HOM05D005702 ORTHO05D007080 2.0e-07 59.7 91 38.5
Eucgr.K03364 Eucalyptus grandis HOM05D005702 ORTHO05D007080 2.6e-07 59.3 91 38.5
DCAR_012484 Daucus carota HOM05D005702 ORTHO05D007080 7.6e-07 57.8 91 39.6
Haze_26338 Corylus avellana HOM05D005702 ORTHO05D007080 1.3e-06 57.0 94 40.4


User provided reference genes

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