Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p01440 Brassica napus HOM05D004906 ORTHO05D040706 1.4e-44 182.6 91 100.0
BraA02t05123Z Brassica rapa HOM05D004906 ORTHO05D040706 1.4e-44 182.6 91 100.0
BcaB01g05413 Brassica carinata HOM05D004906 ORTHO05D005926 2.1e-29 132.1 83 83.1
BcaNung06216 Brassica carinata HOM05D004906 ORTHO05D005926 6.2e-29 130.6 83 81.9
A10p25530 Brassica napus HOM05D004906 ORTHO05D005926 3.4e-27 124.8 87 74.7
C09p64610 Brassica napus HOM05D004906 ORTHO05D005926 5.8e-27 124.0 87 75.9
BraA10t44617Z Brassica rapa HOM05D004906 ORTHO05D005926 7.6e-27 123.6 87 73.6
Thhalv10028084m.g Eutrema salsugineum HOM05D004906 ORTHO05D005926 1.3e-26 122.9 87 74.7
BolC9t59294H Brassica oleracea HOM05D004906 ORTHO05D005926 1.7e-26 122.5 87 74.7
AT5G12260 Arabidopsis thaliana HOM05D004906 ORTHO05D005926 8.4e-26 120.2 87 73.6
Carub.0006s1078 Capsella rubella HOM05D004906 ORTHO05D005926 1.4e-25 119.4 88 71.6
Thhalv10012969m.g Eutrema salsugineum HOM05D004906 ORTHO05D005926 1.4e-25 119.4 87 73.6
C03p06420 Brassica napus HOM05D004906 ORTHO05D005926 1.2e-24 116.3 84 77.4
Sp6g31380 Schrenkiella parvula HOM05D004906 ORTHO05D005926 1.2e-24 116.3 87 72.4
Sp6g31370 Schrenkiella parvula HOM05D004906 ORTHO05D005926 1.6e-24 115.9 87 71.3
AL6G23070 Arabidopsis lyrata HOM05D004906 ORTHO05D005926 2.1e-24 115.5 87 71.3
CARHR200840 Cardamine hirsuta HOM05D004906 ORTHO05D005926 2.7e-24 115.2 87 72.4
BolC3t13148H Brassica oleracea HOM05D004906 ORTHO05D005926 1.0e-23 113.2 84 76.2
BraA03t09888Z Brassica rapa HOM05D004906 ORTHO05D005926 9.7e-22 106.7 84 73.8
A03p05500 Brassica napus HOM05D004906 ORTHO05D005926 2.2e-21 105.5 84 73.8
Aa31LG3G14960 Aethionema arabicum HOM05D004906 ORTHO05D005926 9.0e-20 100.1 89 61.8
THA.LOC104811206 Tarenaya hassleriana HOM05D004906 ORTHO05D005926 1.6e-16 89.4 92 53.3
Actinidia06985 Actinidia chinensis HOM05D004906 ORTHO05D005926 7.9e-08 60.5 89 42.7
Ciclev10014615m.g Citrus clementina HOM05D004906 ORTHO05D005926 8.8e-07 57.0 94 39.4
Thecc.09G253700 Theobroma cacao HOM05D004906 ORTHO05D005926 2.6e-06 55.5 92 38.0
Actinidia24474 Actinidia chinensis HOM05D004906 ORTHO05D005926 4.4e-06 54.7 89 40.4
Eucgr.J00670 Eucalyptus grandis HOM05D004906 ORTHO05D005926 5.7e-06 54.3 92 33.7
Rhsim13G0204200 Rhododendron simsii HOM05D004906 ORTHO05D005926 9.7e-06 53.5 92 34.8


User provided reference genes

Program Settings