Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p01130 Brassica napus HOM05D006609 ORTHO05D008551 8.2e-143 510.4 257 100.0
BraA02t05092Z Brassica rapa HOM05D006609 ORTHO05D008551 2.0e-141 505.8 258 99.6
BcaC03g13384 Brassica carinata HOM05D006609 ORTHO05D008551 6.5e-140 500.7 258 98.1
C02p05310 Brassica napus HOM05D006609 ORTHO05D008551 6.5e-140 500.7 258 98.1
BolC2t06479H Brassica oleracea HOM05D006609 ORTHO05D008551 1.9e-139 499.2 257 98.1
AL6G22350 Arabidopsis lyrata HOM05D006609 ORTHO05D008551 1.8e-129 466.1 257 90.7
BraA10t44672Z Brassica rapa HOM05D006609 ORTHO05D008551 2.8e-127 458.8 257 89.5
Sp6g31980 Schrenkiella parvula HOM05D006609 ORTHO05D008551 3.7e-127 458.4 257 88.7
Thhalv10014470m.g Eutrema salsugineum HOM05D006609 ORTHO05D008551 1.8e-126 456.1 257 88.3
CARHR201580 Cardamine hirsuta HOM05D006609 ORTHO05D008551 4.1e-126 454.9 257 88.3
BcaC04g19208 Brassica carinata HOM05D006609 ORTHO05D008551 1.5e-123 446.4 257 88.3
BolC9t59347H Brassica oleracea HOM05D006609 ORTHO05D008551 1.5e-123 446.4 257 88.3
A10p26110 Brassica napus HOM05D006609 ORTHO05D008551 4.2e-123 444.9 283 80.9
Aa31LG3G15550 Aethionema arabicum HOM05D006609 ORTHO05D008551 7.5e-120 434.1 255 84.3
C09p65180 Brassica napus HOM05D006609 ORTHO05D008551 1.7e-119 433.0 257 86.8
Carub.0006s1012 Capsella rubella HOM05D006609 ORTHO05D008551 1.5e-115 419.9 236 88.6
BcaB08g37036 Brassica carinata HOM05D006609 ORTHO05D008551 1.8e-110 402.9 260 80.4
THA.LOC104808485 Tarenaya hassleriana HOM05D006609 ORTHO05D008551 6.5e-108 394.4 257 75.1
AT5G11640 Arabidopsis thaliana HOM05D006609 ORTHO05D008551 8.9e-97 357.5 190 91.1
Gohir.D05G047900 Gossypium hirsutum HOM05D006609 ORTHO05D008551 7.8e-85 317.8 261 59.4
Thecc.09G046100 Theobroma cacao HOM05D006609 ORTHO05D008551 4.3e-83 312.0 261 59.4
Duzib168G0257 Durio zibethinus HOM05D006609 ORTHO05D008551 3.6e-82 308.9 262 58.4
GSVIVG01035613001 Vitis vinifera HOM05D006609 ORTHO05D008551 8.1e-82 307.8 260 57.7
Actinidia13339 Actinidia chinensis HOM05D006609 ORTHO05D008551 1.8e-81 306.6 247 60.7
CSS0000910 Camellia sinensis var. sinensis HOM05D006609 ORTHO05D008551 8.9e-81 304.3 246 60.6
Potri.006G237600 Populus trichocarpa HOM05D006609 ORTHO05D008551 4.4e-80 302.0 241 61.0
CiPaw.07G203500 Carya illinoinensis HOM05D006609 ORTHO05D008551 9.8e-80 300.8 261 56.3
FvH4_2g35350 Fragaria vesca HOM05D006609 ORTHO05D008551 1.7e-79 300.1 262 57.3
Manes.16G074700 Manihot esculenta HOM05D006609 ORTHO05D008551 2.4e-78 296.2 242 59.9
Cfa013375 Carpinus fangiana HOM05D006609 ORTHO05D008551 7.1e-78 294.7 253 56.9
MD15G1092400 Malus domestica HOM05D006609 ORTHO05D008551 9.2e-78 294.3 267 56.2
BcaNung02663 Brassica carinata HOM05D006609 ORTHO05D008551 1.6e-77 293.5 148 97.3
RcHm_v2.0_Chr6g0306561 Rosa chinensis HOM05D006609 ORTHO05D008551 2.1e-77 293.1 262 56.5
TWI63G1544 Tripterygium wilfordii HOM05D006609 ORTHO05D008551 2.1e-77 293.1 260 56.9
Gorai.009G049200 Gossypium raimondii HOM05D006609 ORTHO05D008551 1.1e-75 287.3 256 56.2
Ciclev10009282m.g Citrus clementina HOM05D006609 ORTHO05D008551 2.5e-75 286.2 251 55.8
COL.COLO4_20980 Corchorus olitorius HOM05D006609 ORTHO05D008551 4.3e-75 285.4 261 54.8
MD08G1113000 Malus domestica HOM05D006609 ORTHO05D008551 7.3e-75 284.6 262 56.1
TAR626G1286 Trochodendron aralioides HOM05D006609 ORTHO05D008551 4.7e-74 282.0 245 57.6
Atru.chr7.2079 Acer truncatum HOM05D006609 ORTHO05D008551 1.4e-73 280.4 217 59.9
MSTRG.25911 Avicennia marina HOM05D006609 ORTHO05D008551 5.2e-73 278.5 258 53.9
FAN15G1983 Fragaria x ananassa HOM05D006609 ORTHO05D008551 8.9e-73 277.7 261 55.2
Hund03393 Selenicereus undatus HOM05D006609 ORTHO05D008551 7.6e-72 274.6 245 57.6
Migut.A00197 Erythranthe guttata HOM05D006609 ORTHO05D008551 9.9e-72 274.2 244 54.9
CANSAT25G3446 Cannabis sativa HOM05D006609 ORTHO05D008551 1.3e-71 273.9 245 56.7
Sopen12g031720 Solanum pennellii HOM05D006609 ORTHO05D008551 1.3e-71 273.9 272 51.1
Sabra06G0185800 Salix brachista HOM05D006609 ORTHO05D008551 1.7e-71 273.5 292 50.3
ClCG11G015120 Citrullus lanatus HOM05D006609 ORTHO05D008551 2.2e-71 273.1 245 54.7
FAN27G2415 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.2e-71 273.1 262 54.2
Glyma.17G192700 Glycine max HOM05D006609 ORTHO05D008551 3.8e-71 272.3 247 55.1
Nn8g39112 Nelumbo nucifera HOM05D006609 ORTHO05D008551 6.4e-71 271.6 248 56.0
MELO3C003467.2 Cucumis melo HOM05D006609 ORTHO05D008551 8.4e-71 271.2 245 55.1
Lj1g0027455 Lotus japonicus HOM05D006609 ORTHO05D008551 8.4e-71 271.2 244 56.6
Psat6g037080 Pisum sativum HOM05D006609 ORTHO05D008551 8.4e-71 271.2 262 53.1
Aqoxy7G01461 Aquilegia oxysepala HOM05D006609 ORTHO05D008551 1.1e-70 270.8 242 56.2
PGR031G0123 Punica granatum HOM05D006609 ORTHO05D008551 1.4e-70 270.4 251 55.0
MBI04_g06585_MAGBIO Magnolia biondii HOM05D006609 ORTHO05D008551 1.9e-70 270.0 245 55.5
Sc09g0009360 Simmondsia chinensis HOM05D006609 ORTHO05D008551 4.1e-70 268.9 245 55.9
arahy.Tifrunner.gnm1.ann1.TZ2NYQ Arachis hypogaea HOM05D006609 ORTHO05D008551 5.4e-70 268.5 258 53.5
arahy.Tifrunner.gnm1.ann1.519I88 Arachis hypogaea HOM05D006609 ORTHO05D008551 7.1e-70 268.1 258 53.5
Lsat_1_v5_gn_6_22680 Lactuca sativa HOM05D006609 ORTHO05D008551 1.6e-69 266.9 240 55.4
VMungo0647G0700 Vigna mungo HOM05D006609 ORTHO05D008551 1.6e-69 266.9 258 53.9
CAN.G208.62 Capsicum annuum HOM05D006609 ORTHO05D008551 2.1e-69 266.5 272 49.6
FAN20G1237 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.1e-69 266.5 262 53.8
Lalb_Chr24g0402671 Lupinus albus HOM05D006609 ORTHO05D008551 3.5e-69 265.8 252 53.2
TPR.G24534 Trifolium pratense HOM05D006609 ORTHO05D008551 3.5e-69 265.8 247 53.8
Dinv27894 Davidia involucrata HOM05D006609 ORTHO05D008551 4.6e-69 265.4 239 55.2
Hma1.2p1_1138F.1_g260815 Hydrangea macrophylla HOM05D006609 ORTHO05D008551 4.6e-69 265.4 227 59.0
Ca_03364_v3 Cicer arietinum L. HOM05D006609 ORTHO05D008551 1.3e-68 263.8 264 52.3
Cc08_g09720 Coffea canephora HOM05D006609 ORTHO05D008551 1.7e-68 263.5 275 51.6
Sed0023433 Sechium edule HOM05D006609 ORTHO05D008551 2.3e-68 263.1 245 51.4
Eucgr.C00603 Eucalyptus grandis HOM05D006609 ORTHO05D008551 3.0e-68 262.7 231 57.6
AUR62042442 Chenopodium quinoa HOM05D006609 ORTHO05D008551 5.1e-68 261.9 245 54.3
Peaxi162Scf00064g01521 Petunia axillaris HOM05D006609 ORTHO05D008551 6.6e-68 261.5 249 51.0
Medtr1g007120 Medicago truncatula HOM05D006609 ORTHO05D008551 1.9e-67 260.0 245 54.3
Ah.16g105840 Amaranthus hybridus HOM05D006609 ORTHO05D008551 3.3e-67 259.2 242 53.3
Phvul.001G063300 Phaseolus vulgaris HOM05D006609 ORTHO05D008551 4.3e-67 258.8 262 50.4
Rhsim02G0176600 Rhododendron simsii HOM05D006609 ORTHO05D008551 5.6e-67 258.5 236 55.1
RhsimUnG0061900 Rhododendron simsii HOM05D006609 ORTHO05D008551 5.6e-67 258.5 236 55.1
CDE02G0347 Ceratophyllum demersum HOM05D006609 ORTHO05D008551 1.6e-66 256.9 243 52.3
Haze_21897 Corylus avellana HOM05D006609 ORTHO05D008551 3.6e-66 255.8 253 51.8
Gohir.A05G046200 Gossypium hirsutum HOM05D006609 ORTHO05D008551 4.7e-66 255.4 226 58.0
ATR0705G113 Amborella trichopoda HOM05D006609 ORTHO05D008551 8.1e-66 254.6 245 52.2
QL12p041270 Quercus lobata HOM05D006609 ORTHO05D008551 1.4e-65 253.8 231 53.7
PSO824G0011 Papaver somniferum HOM05D006609 ORTHO05D008551 6.4e-63 245.0 243 51.4
Solyc12g095820.3 Solanum lycopersicum HOM05D006609 ORTHO05D008551 6.4e-63 245.0 236 51.7
PSO173G0006 Papaver somniferum HOM05D006609 ORTHO05D008551 1.9e-62 243.4 243 50.6
PGSC0003DMG400029395 Solanum tuberosum HOM05D006609 ORTHO05D008551 2.4e-62 243.0 236 51.3
CsaV3_3G048520 Cucumis sativus L. HOM05D006609 ORTHO05D008551 7.1e-62 241.5 224 54.0
HPP92_021778 Vanilla planifolia HOM05D006609 ORTHO05D008551 1.2e-61 240.7 256 47.3
Zm00001eb337980 Zea mays HOM05D006609 ORTHO05D008551 3.9e-60 235.7 243 52.3
SalBow4G0386 Salvia bowleyana HOM05D006609 ORTHO05D008551 6.6e-60 235.0 211 55.0
Os01g0200400 Oryza sativa ssp. japonica HOM05D006609 ORTHO05D008551 1.9e-59 233.4 237 50.2
SGA_v2.0_scaffold243G44286 Striga asiatica HOM05D006609 ORTHO05D008551 4.8e-58 228.8 243 48.6
Cpa.g.sc78.16 Carica papaya HOM05D006609 ORTHO05D008551 2.0e-56 223.4 224 54.5
Nitab4.5_0001737g0100 Nicotiana tabacum HOM05D006609 ORTHO05D008551 1.1e-54 217.6 261 45.6
HanXRQChr13g0402211 Helianthus annuus HOM05D006609 ORTHO05D008551 1.9e-54 216.9 215 51.2
DCAR_000757 Daucus carota HOM05D006609 ORTHO05D010582 2.8e-50 203.0 241 47.3
Nitab4.5_0001309g0120 Nicotiana tabacum HOM05D006609 ORTHO05D008551 8.1e-50 201.4 350 36.0
Prupe.1G447200 Prunus persica HOM05D006609 ORTHO05D008551 2.2e-47 193.4 176 53.4
AUR62009264 Chenopodium quinoa HOM05D006609 ORTHO05D008551 6.4e-47 191.8 170 57.6
ECA233G1748 Erigeron canadensis HOM05D006609 ORTHO05D008551 3.5e-37 159.5 132 60.6
unitig_93.g30708 Utricularia gibba HOM05D006609 ORTHO05D008551 4.6e-37 159.1 250 40.4
vmacro11054 Vaccinium macrocarpon HOM05D006609 ORTHO05D008551 3.8e-31 139.4 110 65.5
Lsat_1_v5_gn_5_12101 Lactuca sativa HOM05D006609 ORTHO05D008551 5.0e-31 139.0 136 50.7
FAN24G0356 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.6e-29 134.0 116 55.2
FAN24G3337 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.6e-29 134.0 116 55.2
EL10Ac2g04002 Beta vulgaris HOM05D006609 ORTHO05D008551 8.5e-23 111.7 206 33.5
SMO144G0045 Selaginella moellendorffii HOM05D006609 ORTHO05D008551 1.9e-22 110.5 154 42.9
HanXRQChr16g0519661 Helianthus annuus HOM05D006609 ORTHO05D008551 8.8e-20 101.7 128 44.5
SEGI_38144 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 2.6e-19 100.1 95 50.5
PRCOL_00006038 Prasinoderma coloniale HOM05D006609 ORTHO05D008551 1.1e-17 94.7 198 30.3
FAN24G1965 Fragaria x ananassa HOM05D006609 ORTHO05D008551 4.1e-17 92.8 91 54.9
SEGI_39152 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 1.0e-12 78.2 90 46.7
Cre10.g426400 Chlamydomonas reinhardtii HOM05D006609 ORTHO05D008551 3.0e-12 76.6 171 29.8
QL09p008974 Quercus lobata HOM05D006609 ORTHO05D008551 3.3e-11 73.2 62 50.0
Haze_26101 Corylus avellana HOM05D006609 ORTHO05D008551 7.7e-08 62.0 132 31.1


User provided reference genes

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