Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p01030 Brassica napus HOM05D001021 ORTHO05D000894 1.1e-60 236.5 121 100.0
BolC2t06462H Brassica oleracea HOM05D001021 ORTHO05D000894 9.5e-25 117.1 80 83.8
BcaC03g13369 Brassica carinata HOM05D001021 ORTHO05D000894 2.4e-20 102.4 69 82.6
BcaNung01930 Brassica carinata HOM05D001021 ORTHO05D000894 2.4e-20 102.4 69 82.6
C02p05080 Brassica napus HOM05D001021 ORTHO05D000894 2.4e-20 102.4 69 82.6
Thhalv10013515m.g Eutrema salsugineum HOM05D001021 ORTHO05D000894 3.2e-20 102.1 69 81.2
Sp6g32080 Schrenkiella parvula HOM05D001021 ORTHO05D000894 1.9e-17 92.8 66 77.3
CARHR201700 Cardamine hirsuta HOM05D001021 ORTHO05D000894 4.3e-17 91.7 71 73.2
AL6G22190 Arabidopsis lyrata HOM05D001021 ORTHO05D000894 4.7e-16 88.2 69 72.5
BolC3t13093H Brassica oleracea HOM05D001021 ORTHO05D000894 4.7e-16 88.2 69 69.6
Carub.0006s0998 Capsella rubella HOM05D001021 ORTHO05D000894 4.7e-16 88.2 70 72.9
Aa31LG3G15680 Aethionema arabicum HOM05D001021 ORTHO05D000894 1.1e-15 87.0 66 72.7
C03p05800 Brassica napus HOM05D001021 ORTHO05D000894 1.4e-15 86.7 69 68.1
BcaB01g05478 Brassica carinata HOM05D001021 ORTHO05D000894 4.0e-15 85.1 68 67.6
A03p05070 Brassica napus HOM05D001021 ORTHO05D000894 6.8e-15 84.3 71 69.0
BraA03t09841Z Brassica rapa HOM05D001021 ORTHO05D000894 6.8e-15 84.3 71 69.0
AT5G11520 Arabidopsis thaliana HOM05D001021 ORTHO05D000894 5.8e-14 81.3 69 68.1
THA.LOC104808487 Tarenaya hassleriana HOM05D001021 ORTHO05D000894 2.1e-11 72.8 65 66.2
Sed0005655 Sechium edule HOM05D001021 ORTHO05D000894 2.5e-09 65.9 63 57.1
CSS0019452 Camellia sinensis var. sinensis HOM05D001021 ORTHO05D000894 4.7e-08 61.6 63 52.4
PGR044G0269 Punica granatum HOM05D001021 ORTHO05D000894 1.1e-07 60.5 63 55.6
Duzib150G0063 Durio zibethinus HOM05D001021 ORTHO05D000894 1.4e-07 60.1 70 51.4
ClCG11G014070 Citrullus lanatus HOM05D001021 ORTHO05D000894 2.3e-07 59.3 63 52.4
CsaV3_3G047470 Cucumis sativus L. HOM05D001021 ORTHO05D000894 2.3e-07 59.3 64 51.6
Gohir.A07G023500 Gossypium hirsutum HOM05D001021 ORTHO05D000894 4.0e-07 58.5 67 50.7
CANSAT25G1257 Cannabis sativa HOM05D001021 ORTHO05D000894 6.8e-07 57.8 63 54.0
Dinv30260 Davidia involucrata HOM05D001021 ORTHO05D000894 6.8e-07 57.8 60 51.7
Thecc.09G040700 Theobroma cacao HOM05D001021 ORTHO05D000894 6.8e-07 57.8 69 47.8
CiPaw.07G206600 Carya illinoinensis HOM05D001021 ORTHO05D000894 1.5e-06 56.6 63 54.0
FvH4_2g36030 Fragaria vesca HOM05D001021 ORTHO05D000894 1.5e-06 56.6 67 53.7
FAN15G0140 Fragaria x ananassa HOM05D001021 ORTHO05D000894 1.5e-06 56.6 67 55.2
FAN27G2059 Fragaria x ananassa HOM05D001021 ORTHO05D000894 1.5e-06 56.6 67 53.7
Atru.chr7.2152 Acer truncatum HOM05D001021 ORTHO05D000894 2.0e-06 56.2 69 52.2
TAR626G0363 Trochodendron aralioides HOM05D001021 ORTHO05D000894 2.0e-06 56.2 60 50.0
Ciclev10008274m.g Citrus clementina HOM05D001021 ORTHO05D000894 2.6e-06 55.8 59 54.2
MELO3C003577.2 Cucumis melo HOM05D001021 ORTHO05D000894 2.6e-06 55.8 63 47.6
Lj1g0015562 Lotus japonicus HOM05D001021 ORTHO05D000894 2.6e-06 55.8 70 52.9
Manes.03G061000 Manihot esculenta HOM05D001021 ORTHO05D000894 2.6e-06 55.8 57 50.9
Sed0006050 Sechium edule HOM05D001021 ORTHO05D000894 2.6e-06 55.8 63 49.2
Haze_21863 Corylus avellana HOM05D001021 ORTHO05D000894 3.4e-06 55.5 63 50.8
Gorai.001G028100 Gossypium raimondii HOM05D001021 ORTHO05D000894 3.4e-06 55.5 67 49.3
Potri.006G241600 Populus trichocarpa HOM05D001021 ORTHO05D000894 4.4e-06 55.1 65 50.8
Gohir.D07G027100 Gossypium hirsutum HOM05D001021 ORTHO05D000894 7.6e-06 54.3 63 50.8
Cpa.g.sc78.75 Carica papaya HOM05D001021 ORTHO05D000894 9.9e-06 53.9 70 50.0


User provided reference genes

Program Settings