Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p40100 Brassica napus HOM05D007392 ORTHO05D009181 1.5e-72 276.2 151 100.0
BraA01t04052Z Brassica rapa HOM05D007392 ORTHO05D009181 1.5e-72 276.2 151 100.0
C01p51590 Brassica napus HOM05D007392 ORTHO05D009181 5.3e-65 251.1 152 88.8
BolC1t05102H Brassica oleracea HOM05D007392 ORTHO05D009181 5.8e-64 247.7 152 88.2
A05p36050 Brassica napus HOM05D007392 ORTHO05D009181 3.1e-41 172.2 161 68.9
Carub.0003s1294 Capsella rubella HOM05D007392 ORTHO05D009181 5.3e-41 171.4 160 62.5
Sp3g11690 Schrenkiella parvula HOM05D007392 ORTHO05D009181 9.0e-41 170.6 170 66.5
BraA03t12977Z Brassica rapa HOM05D007392 ORTHO05D009181 1.0e-39 167.2 171 64.3
AT3G13480 Arabidopsis thaliana HOM05D007392 ORTHO05D009181 1.4e-38 163.3 162 69.8
Thhalv10021633m.g Eutrema salsugineum HOM05D007392 ORTHO05D009181 1.9e-38 162.9 170 65.9
BcaC05g29176 Brassica carinata HOM05D007392 ORTHO05D009181 7.2e-38 161.0 165 64.2
BcaB04g18766 Brassica carinata HOM05D007392 ORTHO05D009181 3.0e-36 155.6 157 59.2
AL3G25390 Arabidopsis lyrata HOM05D007392 ORTHO05D009181 4.3e-35 151.8 160 65.6
THA.LOC104810320 Tarenaya hassleriana HOM05D007392 ORTHO05D009181 1.1e-33 147.1 153 55.6
CARHR088140 Cardamine hirsuta HOM05D007392 ORTHO05D009181 1.8e-33 146.4 157 62.4
BcaC01g03991 Brassica carinata HOM05D007392 ORTHO05D009181 3.9e-28 128.6 147 54.4
C05p54400 Brassica napus HOM05D007392 ORTHO05D009181 1.2e-24 117.1 144 61.1
CiPaw.13G177600 Carya illinoinensis HOM05D007392 ORTHO05D009181 2.6e-24 115.9 153 47.1
Potri.003G221800 Populus trichocarpa HOM05D007392 ORTHO05D009181 5.0e-23 111.7 154 48.1
TWI34G1824 Tripterygium wilfordii HOM05D007392 ORTHO05D009181 7.2e-22 107.8 156 44.2
Manes.15G109800 Manihot esculenta HOM05D007392 ORTHO05D009181 1.6e-21 106.7 155 44.5
Potri.001G003300 Populus trichocarpa HOM05D007392 ORTHO05D009181 3.6e-21 105.5 158 48.1
CANSAT11G0973 Cannabis sativa HOM05D007392 ORTHO05D009181 4.7e-21 105.1 157 45.2
GSVIVG01025476001 Vitis vinifera HOM05D007392 ORTHO05D009181 4.7e-21 105.1 155 43.2
Aa31LG8G680 Aethionema arabicum HOM05D007392 ORTHO05D009181 1.8e-20 103.2 160 43.8
RcHm_v2.0_Chr5g0083851 Rosa chinensis HOM05D007392 ORTHO05D009181 1.8e-20 103.2 158 46.8
Cfa009557 Carpinus fangiana HOM05D007392 ORTHO05D009181 2.3e-20 102.8 155 46.5
C03p46400 Brassica napus HOM05D007392 ORTHO05D009181 3.9e-20 102.1 156 48.7
Dinv13477 Davidia involucrata HOM05D007392 ORTHO05D009181 7.4e-19 97.8 157 43.3
FAN16G0802 Fragaria x ananassa HOM05D007392 ORTHO05D009181 7.4e-19 97.8 160 46.2
FvH4_3g45780 Fragaria vesca HOM05D007392 ORTHO05D009181 1.3e-18 97.1 158 47.5
QL01p003594 Quercus lobata HOM05D007392 ORTHO05D009181 1.7e-18 96.7 181 39.8
BraA05t22411Z Brassica rapa HOM05D001472 ORTHO05D007811 2.2e-18 96.3 128 62.5
Sabra03G0165000 Salix brachista HOM05D007392 ORTHO05D009181 2.8e-18 95.9 133 48.9
FAN11G3804 Fragaria x ananassa HOM05D007392 ORTHO05D009181 1.4e-17 93.6 156 46.8
Actinidia00905 Actinidia chinensis HOM05D007392 ORTHO05D009181 2.4e-17 92.8 153 45.1
BolC5t34105H Brassica oleracea HOM05D001472 ORTHO05D007811 2.4e-17 92.8 127 61.4
C03p46430 Brassica napus HOM05D007392 ORTHO05D009181 3.1e-17 92.4 120 53.3
ClCG03G014560 Citrullus lanatus HOM05D007392 ORTHO05D009181 4.1e-17 92.0 152 39.5
Ciclev10017000m.g Citrus clementina HOM05D007392 ORTHO05D009181 7.0e-17 91.3 154 40.9
MD03G1003200 Malus domestica HOM05D007392 ORTHO05D009181 7.0e-17 91.3 157 40.1
Aqoxy2G00525 Aquilegia oxysepala HOM05D007392 ORTHO05D009181 1.2e-16 90.5 157 41.4
Sabra01G0002400 Salix brachista HOM05D007392 ORTHO05D009181 2.0e-16 89.7 137 47.4
Cc01_g00150 Coffea canephora HOM05D007392 ORTHO05D009181 2.6e-16 89.4 157 41.4
Lsat_1_v5_gn_6_55560 Lactuca sativa HOM05D007392 ORTHO05D009181 3.5e-16 89.0 155 41.3
CsaV3_1G041630 Cucumis sativus L. HOM05D007392 ORTHO05D009181 5.9e-16 88.2 159 39.6
PSO339G3225 Papaver somniferum HOM05D007392 ORTHO05D009181 1.0e-15 87.4 153 42.5
Actinidia16241 Actinidia chinensis HOM05D007392 ORTHO05D009181 1.3e-15 87.0 145 44.8
Eucgr.J01763 Eucalyptus grandis HOM05D007392 ORTHO05D009181 1.7e-15 86.7 151 39.1
Prupe.6G002800 Prunus persica HOM05D007392 ORTHO05D009181 1.7e-15 86.7 135 43.7
ECA233G2404 Erigeron canadensis HOM05D007392 ORTHO05D009181 3.8e-15 85.5 159 42.1
PSO384G3152 Papaver somniferum HOM05D007392 ORTHO05D009181 3.8e-15 85.5 156 41.7
MELO3C015574.2 Cucumis melo HOM05D007392 ORTHO05D009181 6.5e-15 84.7 159 39.0
TAR623G1707 Trochodendron aralioides HOM05D007392 ORTHO05D009181 8.5e-15 84.3 153 39.9
FAN25G2102 Fragaria x ananassa HOM05D007392 ORTHO05D009181 1.5e-14 83.6 136 46.3
Rhsim13G0233100 Rhododendron simsii HOM05D007392 ORTHO05D009181 1.9e-14 83.2 144 42.4
C03p46410 Brassica napus HOM05D007392 ORTHO05D009181 2.5e-14 82.8 43 86.0
Carub.0001s4396 Capsella rubella HOM05D007392 ORTHO05D009181 2.5e-14 82.8 89 56.2
EL10Ac4g10390 Beta vulgaris HOM05D007392 ORTHO05D009181 4.2e-14 82.0 143 42.0
SalBow3G3897 Salvia bowleyana HOM05D007392 ORTHO05D009181 5.5e-14 81.6 157 42.7
Sed0020032 Sechium edule HOM05D007392 ORTHO05D009181 5.5e-14 81.6 157 38.9
Aa31LG10G780 Aethionema arabicum HOM05D007392 ORTHO05D009181 7.2e-14 81.3 92 55.4
AT1G55475 Arabidopsis thaliana HOM05D007392 ORTHO05D009181 1.2e-13 80.5 94 54.3
PGR119G0135 Punica granatum HOM05D007392 ORTHO05D009181 2.1e-13 79.7 161 36.6
Nn2g15869 Nelumbo nucifera HOM05D007392 ORTHO05D009181 2.7e-13 79.3 155 37.4
Solyc01g005530.3 Solanum lycopersicum HOM05D007392 ORTHO05D009181 2.7e-13 79.3 160 38.1
Sopen01g001550 Solanum pennellii HOM05D007392 ORTHO05D009181 6.1e-13 78.2 160 37.5
MD11G1003000 Malus domestica HOM05D007392 ORTHO05D009181 8.0e-13 77.8 157 37.6
SGA_v2.0_scaffold6G03356 Striga asiatica HOM05D007392 ORTHO05D009181 1.0e-12 77.4 156 39.1
AL1G63490 Arabidopsis lyrata HOM05D007392 ORTHO05D009181 2.3e-12 76.3 91 54.9
BcaNung05740 Brassica carinata HOM05D000708 ORTHO05D001418 2.3e-12 76.3 40 90.0
DCAR_032194 Daucus carota HOM05D007392 ORTHO05D009181 3.0e-12 75.9 145 37.2
A03p38240 Brassica napus HOM05D001472 ORTHO05D007811 4.0e-12 75.5 121 55.4
PGSC0003DMG402032165 Solanum tuberosum HOM05D007392 ORTHO05D009181 4.0e-12 75.5 154 39.0
CARHR045140 Cardamine hirsuta HOM05D007392 ORTHO05D009181 8.8e-12 74.3 79 57.0
Sc09g0000040 Simmondsia chinensis HOM05D007392 ORTHO05D009181 8.8e-12 74.3 167 37.1
C03p92800 Brassica napus HOM05D007392 ORTHO05D009181 3.3e-11 72.4 94 55.3
BcaC01g01528 Brassica carinata HOM05D007392 ORTHO05D009181 5.7e-11 71.6 98 53.1
BolC3t21586H Brassica oleracea HOM05D007392 ORTHO05D009181 5.7e-11 71.6 98 53.1
Cpa.g.sc119.37 Carica papaya HOM05D007392 ORTHO05D009181 9.7e-11 70.9 120 45.0
Nn7g35849 Nelumbo nucifera HOM05D007392 ORTHO05D009181 9.7e-11 70.9 133 39.8
A08p00640 Brassica napus HOM05D007392 ORTHO05D009181 1.7e-10 70.1 82 57.3
BraA08t32122Z Brassica rapa HOM05D007392 ORTHO05D009181 1.7e-10 70.1 82 57.3
Nitab4.5_0006195g0060 Nicotiana tabacum HOM05D007392 ORTHO05D009181 3.7e-10 68.9 134 38.1
CAN.G1834.12 Capsicum annuum HOM05D007392 ORTHO05D009181 4.8e-10 68.6 154 36.4
Migut.D02571 Erythranthe guttata HOM05D007392 ORTHO05D009181 1.1e-09 67.4 158 39.2
Migut.D02593 Erythranthe guttata HOM05D007392 ORTHO05D009181 1.1e-09 67.4 159 36.5
Peaxi162Scf00705g00062 Petunia axillaris HOM05D007392 ORTHO05D009181 2.4e-09 66.2 137 40.1
Thhalv10011881m.g Eutrema salsugineum HOM05D007392 ORTHO05D009181 3.1e-09 65.9 95 52.6
Oeu004754.1 Olea europaea HOM05D007392 ORTHO05D009181 4.1e-09 65.5 134 40.3
Nitab4.5_0000551g0100 Nicotiana tabacum HOM05D007392 ORTHO05D009181 7.0e-09 64.7 132 38.6
MSTRG.20935 Avicennia marina HOM05D000287 ORTHO05D000319 1.2e-08 63.9 131 39.7
Sp1g41080 Schrenkiella parvula HOM05D007392 ORTHO05D009181 4.5e-08 62.0 82 48.8
BcaB04g16956 Brassica carinata HOM05D005410 ORTHO05D009181 5.9e-08 61.6 87 48.3
Oeu059652.1 Olea europaea HOM05D007392 ORTHO05D009181 1.3e-07 60.5 133 37.6
HPP92_015638 Vanilla planifolia HOM05D007392 ORTHO05D009181 9.4e-06 54.3 77 46.8


User provided reference genes

Program Settings