Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p39710 Brassica napus HOM05D004436 ORTHO05D005179 1.7e-233 812.4 429 100.0
BraA01t04010Z Brassica rapa HOM05D004436 ORTHO05D005179 1.6e-231 805.8 429 99.1
BcaC09g48383 Brassica carinata HOM05D004436 ORTHO05D005179 1.4e-224 782.7 428 96.5
C01p50660 Brassica napus HOM05D004436 ORTHO05D005179 1.4e-224 782.7 428 96.5
BolC1t05015H Brassica oleracea HOM05D004436 ORTHO05D005179 1.4e-224 782.7 428 96.5
BcaB04g20967 Brassica carinata HOM05D004436 ORTHO05D005179 3.0e-174 615.5 443 78.3
Sp3g12180 Schrenkiella parvula HOM05D004436 ORTHO05D005179 4.4e-165 585.1 435 69.9
Thhalv10020760m.g Eutrema salsugineum HOM05D004436 ORTHO05D005179 4.4e-149 531.9 436 67.2
Aa31LG8G1130 Aethionema arabicum HOM05D004436 ORTHO05D005179 5.8e-133 478.4 442 60.4
AT3G13940 Arabidopsis thaliana HOM05D004436 ORTHO05D005179 2.7e-122 443.0 443 53.3
AL3G26120 Arabidopsis lyrata HOM05D004436 ORTHO05D005179 4.7e-119 432.2 443 52.6
CARHR088750 Cardamine hirsuta HOM05D004436 ORTHO05D005179 1.6e-114 417.2 417 54.7
Carub.0003s1351 Capsella rubella HOM05D004436 ORTHO05D005179 5.6e-112 408.7 433 51.5
THA.LOC104804933 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 7.3e-112 408.3 402 55.7
Cpa.g.sc25.86 Carica papaya HOM05D004436 ORTHO05D005179 4.6e-106 389.0 450 49.8
Manes.11G023100 Manihot esculenta HOM05D004436 ORTHO05D005179 9.6e-96 354.8 427 46.6
TWI23G0436 Tripterygium wilfordii HOM05D004436 ORTHO05D005179 2.8e-95 353.2 389 50.4
Eucgr.F03167 Eucalyptus grandis HOM05D004436 ORTHO05D005179 9.0e-94 348.2 401 46.1
Manes.04G142200 Manihot esculenta HOM05D004436 ORTHO05D005179 1.5e-93 347.4 429 46.6
Duzib205G0267 Durio zibethinus HOM05D004436 ORTHO05D005179 1.6e-90 337.4 414 47.3
CiPaw.01G221800 Carya illinoinensis HOM05D004436 ORTHO05D005179 3.5e-90 336.3 399 45.1
CsaV3_7G034640 Cucumis sativus L. HOM05D004436 ORTHO05D005179 1.8e-89 334.0 397 46.3
CiPaw.05G181900 Carya illinoinensis HOM05D004436 ORTHO05D005179 2.3e-89 333.6 399 44.9
MELO3C024372.2 Cucumis melo HOM05D004436 ORTHO05D005179 3.0e-89 333.2 397 46.3
ClCG09G000840 Citrullus lanatus HOM05D004436 ORTHO05D005179 8.7e-89 331.6 400 45.5
Lsat_1_v5_gn_5_135221 Lactuca sativa HOM05D004436 ORTHO05D005179 8.7e-89 331.6 390 46.4
Thecc.03G227200 Theobroma cacao HOM05D004436 ORTHO05D005179 8.7e-89 331.6 423 45.2
PGR119G1065 Punica granatum HOM05D004436 ORTHO05D005179 1.5e-88 330.9 391 46.3
Ciclev10025597m.g Citrus clementina HOM05D004436 ORTHO05D005179 9.6e-88 328.2 391 46.0
CSS0015890 Camellia sinensis var. sinensis HOM05D004436 ORTHO05D005179 1.1e-86 324.7 387 45.2
Actinidia32167 Actinidia chinensis HOM05D004436 ORTHO05D005179 1.4e-86 324.3 407 43.2
Gohir.D03G171700 Gossypium hirsutum HOM05D004436 ORTHO05D005179 1.8e-86 323.9 412 46.6
HanXRQChr10g0312341 Helianthus annuus HOM05D004436 ORTHO05D005179 3.1e-86 323.2 390 46.7
Oeu044709.1 Olea europaea HOM05D004436 ORTHO05D005179 5.3e-86 322.4 401 46.1
Gorai.003G182300 Gossypium raimondii HOM05D004436 ORTHO05D005179 6.9e-86 322.0 412 46.6
Sed0020704 Sechium edule HOM05D004436 ORTHO05D005179 9.0e-86 321.6 389 45.2
Potri.001G198600 Populus trichocarpa HOM05D004436 ORTHO05D005179 1.2e-85 321.2 423 44.0
MD09G1187900 Malus domestica HOM05D004436 ORTHO05D005179 1.5e-85 320.9 391 46.3
Hma1.2p1_0496F.1_g166100 Hydrangea macrophylla HOM05D004436 ORTHO05D005179 4.5e-85 319.3 411 44.3
Lj6g0016044 Lotus japonicus HOM05D004436 ORTHO05D005179 5.8e-85 318.9 403 44.4
TAR375G0086 Trochodendron aralioides HOM05D004436 ORTHO05D005179 5.8e-85 318.9 401 42.4
GSVIVG01016817001 Vitis vinifera HOM05D004436 ORTHO05D005179 7.6e-85 318.5 389 46.3
Medtr7g104810 Medicago truncatula HOM05D004436 ORTHO05D005179 3.8e-84 316.2 401 44.6
Oeu047041.1 Olea europaea HOM05D004436 ORTHO05D005179 4.9e-84 315.8 384 45.8
Gohir.A03G000500 Gossypium hirsutum HOM05D004436 ORTHO05D005179 6.5e-84 315.5 412 46.1
Sed0007780 Sechium edule HOM05D004436 ORTHO05D005179 8.4e-84 315.1 401 44.1
COL.COLO4_30482 Corchorus olitorius HOM05D004436 ORTHO05D005179 1.1e-83 314.7 413 45.5
Prupe.3G044800 Prunus persica HOM05D004436 ORTHO05D005179 1.4e-83 314.3 394 43.4
ECA234G4408 Erigeron canadensis HOM05D004436 ORTHO05D005179 2.5e-83 313.5 384 46.6
Ca_02096_v3 Cicer arietinum L. HOM05D004436 ORTHO05D005179 5.5e-83 312.4 389 45.0
Dinv03512 Davidia involucrata HOM05D004436 ORTHO05D005179 5.5e-83 312.4 401 42.6
Rhsim08G0236100 Rhododendron simsii HOM05D004436 ORTHO05D005179 7.1e-83 312.0 402 43.0
Sopen06g018390 Solanum pennellii HOM05D004436 ORTHO05D005179 7.1e-83 312.0 393 45.3
vmacro22224 Vaccinium macrocarpon HOM05D004436 ORTHO05D005179 1.2e-82 311.2 393 44.0
Glyma.15G165300 Glycine max HOM05D004436 ORTHO05D005179 2.7e-82 310.1 383 46.5
Atru.chr1.3808 Acer truncatum HOM05D004436 ORTHO05D005179 3.5e-82 309.7 422 41.7
Solyc06g053330.4 Solanum lycopersicum HOM05D004436 ORTHO05D005179 3.5e-82 309.7 393 44.8
CSS0033207 Camellia sinensis var. sinensis HOM05D004436 ORTHO05D005179 1.8e-81 307.4 387 43.7
Medtr2g037880 Medicago truncatula HOM05D004436 ORTHO05D005179 3.9e-81 306.2 391 44.2
RcHm_v2.0_Chr2g0144531 Rosa chinensis HOM05D004436 ORTHO05D005179 1.5e-80 304.3 399 43.6
PGSC0003DMG400016304 Solanum tuberosum HOM05D004436 ORTHO05D005179 1.5e-80 304.3 393 44.0
Hund20819 Selenicereus undatus HOM05D004436 ORTHO05D005179 2.5e-80 303.5 392 42.9
FAN02G3564 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.3e-79 301.2 402 43.5
Psat1g144000 Pisum sativum HOM05D004436 ORTHO05D005179 1.3e-79 301.2 393 44.5
FAN09G2135 Fragaria x ananassa HOM05D004436 ORTHO05D005179 2.1e-79 300.4 402 43.8
Sabra01G0155800 Salix brachista HOM05D004436 ORTHO05D005179 2.8e-79 300.1 435 40.2
Lj5A40G74 Lonicera japonica HOM05D004436 ORTHO05D005179 4.8e-79 299.3 395 43.5
arahy.Tifrunner.gnm1.ann1.4RDH3B Arachis hypogaea HOM05D004436 ORTHO05D005179 6.2e-79 298.9 391 41.9
DCAR_026403 Daucus carota HOM05D004436 ORTHO05D005179 6.2e-79 298.9 398 43.5
FAN05G5343 Fragaria x ananassa HOM05D004436 ORTHO05D005179 6.2e-79 298.9 406 43.3
Dinv30366 Davidia involucrata HOM05D004436 ORTHO05D005179 8.2e-79 298.5 356 45.2
Sc12g0010440 Simmondsia chinensis HOM05D004436 ORTHO05D005179 1.1e-78 298.1 397 44.3
arahy.Tifrunner.gnm1.ann1.0TY6IG Arachis hypogaea HOM05D004436 ORTHO05D005179 1.4e-78 297.7 391 41.9
CAN.G540.4 Capsicum annuum HOM05D004436 ORTHO05D005179 1.4e-78 297.7 394 42.6
FvH4_6g34180 Fragaria vesca HOM05D004436 ORTHO05D005179 3.1e-78 296.6 402 42.8
COL.COLO4_17027 Corchorus olitorius HOM05D004436 ORTHO05D005179 9.0e-78 295.0 351 48.7
Lalb_Chr08g0233321 Lupinus albus HOM05D004436 ORTHO05D005179 1.2e-77 294.7 389 44.2
CANSAT56G1493 Cannabis sativa HOM05D004436 ORTHO05D005179 2.0e-77 293.9 380 41.3
Haze_15997 Corylus avellana HOM05D004436 ORTHO05D005179 4.5e-77 292.7 431 39.7
Medtr2g037460 Medicago truncatula HOM05D004436 ORTHO05D005179 4.5e-77 292.7 393 44.0
Nitab4.5_0000035g0090 Nicotiana tabacum HOM05D004436 ORTHO05D005179 4.5e-77 292.7 391 42.2
MSTRG.22562 Avicennia marina HOM05D004436 ORTHO05D005179 1.1e-75 288.1 404 41.8
Phvul.009G236700 Phaseolus vulgaris HOM05D004436 ORTHO05D005179 2.5e-75 287.0 388 44.8
TPR.G13789 Trifolium pratense HOM05D004436 ORTHO05D005179 2.5e-75 287.0 395 43.8
Peaxi162Scf00943g00014 Petunia axillaris HOM05D004436 ORTHO05D005179 4.2e-75 286.2 401 40.4
Peaxi162Scf00647g00219 Petunia axillaris HOM05D004436 ORTHO05D005179 1.2e-74 284.6 395 41.0
FAN14G2695 Fragaria x ananassa HOM05D004436 ORTHO05D005179 2.1e-74 283.9 438 39.7
Aqoxy2G00706 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 1.0e-73 281.6 395 41.3
FAN26G0630 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.0e-73 281.6 395 42.8
Migut.D00948 Erythranthe guttata HOM05D004436 ORTHO05D005179 1.8e-73 280.8 410 41.2
SGA_v2.0_scaffold68G22895 Striga asiatica HOM05D004436 ORTHO05D005179 3.0e-73 280.0 392 43.4
AUR62009860 Chenopodium quinoa HOM05D004436 ORTHO05D005179 1.5e-72 277.7 390 40.5
Nitab4.5_0012713g0010 Nicotiana tabacum HOM05D004436 ORTHO05D005179 2.5e-72 276.9 390 42.1
RcHm_v2.0_Chr2g0166351 Rosa chinensis HOM05D004436 ORTHO05D005179 1.3e-71 274.6 393 42.7
EL10Ac7g16380 Beta vulgaris HOM05D004436 ORTHO05D005179 4.8e-71 272.7 385 42.6
EL10Ac7g16378 Beta vulgaris HOM05D004436 ORTHO05D005179 6.3e-71 272.3 387 42.4
Cc04_g01610 Coffea canephora HOM05D004436 ORTHO05D005179 8.2e-71 271.9 315 47.0
CDE07G0038 Ceratophyllum demersum HOM05D004436 ORTHO05D005179 1.4e-70 271.2 420 38.8
FvH4_6g47280 Fragaria vesca HOM05D004436 ORTHO05D005179 1.5e-69 267.7 412 41.0
AUR62001510 Chenopodium quinoa HOM05D004436 ORTHO05D005179 1.1e-67 261.5 416 38.0
Ah.07g197300 Amaranthus hybridus HOM05D004436 ORTHO05D005179 2.5e-67 260.4 390 39.0
Rhsim10G0150900 Rhododendron simsii HOM05D004436 ORTHO05D005179 7.2e-67 258.8 471 35.5
PSO724G1089 Papaver somniferum HOM05D004436 ORTHO05D005179 2.1e-66 257.3 396 38.9
PSO135G0558 Papaver somniferum HOM05D004436 ORTHO05D005179 1.4e-65 254.6 399 37.8
QL05p009436 Quercus lobata HOM05D004436 ORTHO05D005179 1.4e-62 244.6 606 29.7
Carub.0003s3547 Capsella rubella HOM05D004436 ORTHO05D005179 6.9e-62 242.3 357 42.6
unitig_26.g9010 Utricularia gibba HOM05D000572 ORTHO05D002399 2.0e-61 240.7 403 37.2
Actinidia21779 Actinidia chinensis HOM05D004436 ORTHO05D005179 1.1e-59 235.0 405 37.3
FAN24G2018 Fragaria x ananassa HOM05D004436 ORTHO05D005179 6.7e-57 225.7 378 38.4
Nn6g35749 Nelumbo nucifera HOM05D004436 ORTHO05D005179 1.1e-56 224.9 393 36.6
Lj6g0018808 Lotus japonicus HOM05D004436 ORTHO05D005179 1.1e-54 218.4 246 45.9
HPP92_009424 Vanilla planifolia HOM05D004436 ORTHO05D005179 1.4e-54 218.0 394 37.8
Peaxi162Scf00060g02815 Petunia axillaris HOM05D004436 ORTHO05D005179 1.8e-54 217.6 395 35.7
MD17G1172300 Malus domestica HOM05D004436 ORTHO05D005179 2.4e-54 217.2 310 41.9
ATR0762G049 Amborella trichopoda HOM05D004436 ORTHO05D005179 1.3e-52 211.5 423 34.3
TPR.G16505 Trifolium pratense HOM05D004436 ORTHO05D005179 2.2e-52 210.7 220 47.3
Nitab4.5_0004287g0020 Nicotiana tabacum HOM05D004436 ORTHO05D005179 1.1e-51 208.4 382 36.1
FvH4_2g14600 Fragaria vesca HOM05D004436 ORTHO05D005179 3.2e-51 206.8 300 42.3
THA.LOC104822769 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 7.4e-48 195.7 239 49.8
Ca_27339_v3 Cicer arietinum L. HOM05D004436 ORTHO05D005179 8.0e-42 175.6 277 40.4
Zm00001eb166800 Zea mays HOM05D004436 ORTHO05D005179 2.6e-40 170.6 394 31.7
AagrBONN_evm.TU.Sc2ySwM_368.2707 Anthoceros agrestis HOM05D004436 ORTHO05D005179 1.7e-39 167.9 454 29.5
Pp3c8_24340 Physcomitrium patens HOM05D004436 ORTHO05D005179 6.3e-39 166.0 439 30.8
Os11g0615100 Oryza sativa ssp. japonica HOM05D004436 ORTHO05D005179 8.3e-39 165.6 386 32.4
Ah.08g216510 Amaranthus hybridus HOM05D004436 ORTHO05D005179 1.8e-38 164.5 308 34.7
DCAR_023423 Daucus carota HOM05D004436 ORTHO05D005179 9.1e-38 162.2 228 41.7
FAN14G5104 Fragaria x ananassa HOM05D002326 ORTHO05D005179 2.9e-36 157.1 230 40.4
SEGI_28110 Sequoiadendron giganteum HOM05D004436 ORTHO05D005179 1.2e-32 145.2 320 34.4
Aqoxy7G00272 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 4.1e-30 136.7 245 34.7
SEGI_22335 Sequoiadendron giganteum HOM05D004436 ORTHO05D005179 8.6e-28 129.0 317 31.5
Aqoxy2G02914 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 7.2e-27 125.9 139 47.5
FAN27G1625 Fragaria x ananassa HOM05D004436 ORTHO05D005179 9.5e-27 125.6 367 30.5
Oeu004353.1 Olea europaea HOM05D004436 ORTHO05D005179 3.6e-26 123.6 109 57.8
FAN20G3048 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.8e-25 121.3 247 34.4
THA.LOC104822775 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 2.3e-25 120.9 184 49.5
Mapoly0063s0055 Marchantia polymorpha HOM05D004436 ORTHO05D005179 3.0e-25 120.6 338 32.5
AUR62000997 Chenopodium quinoa HOM05D004436 ORTHO05D005179 6.8e-25 119.4 133 49.6
AL1G64440 Arabidopsis lyrata HOM05D004436 ORTHO05D005179 1.3e-23 115.2 156 42.3
FAN15G1241 Fragaria x ananassa HOM05D004436 ORTHO05D005179 2.9e-23 114.0 105 55.2
FAN02G4131 Fragaria x ananassa HOM05D002326 ORTHO05D005179 1.8e-17 94.7 385 28.1
FAN09G3702 Fragaria x ananassa HOM05D002326 ORTHO05D005179 3.1e-17 94.0 386 29.0
CBR_g45967 Chara braunii HOM05D004436 ORTHO05D005179 1.5e-16 91.7 451 24.6
ATR0185G001 Amborella trichopoda HOM05D004436 ORTHO05D005179 2.2e-15 87.8 123 41.5
Haze_06394 Corylus avellana HOM05D004436 ORTHO05D005179 6.4e-15 86.3 185 34.6
PGSC0003DMG400002436 Solanum tuberosum HOM05D004436 ORTHO05D005179 1.1e-14 85.5 94 50.0
Dinv21190 Davidia involucrata HOM05D004436 ORTHO05D005179 1.9e-14 84.7 109 42.2
TPR.G16496 Trifolium pratense HOM05D004436 ORTHO05D005179 6.6e-12 76.3 121 38.8
Aqoxy2G02915 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 5.6e-11 73.2 141 34.0
Peaxi162Scf01131g00007 Petunia axillaris HOM05D004436 ORTHO05D005179 1.1e-09 68.9 135 32.6
SEGI_36774 Sequoiadendron giganteum HOM05D004436 ORTHO05D005179 4.4e-08 63.5 131 32.1
SMO144G0124 Selaginella moellendorffii HOM05D004436 ORTHO05D005179 2.9e-07 60.8 89 38.2
Cre01.g070567 Chlamydomonas reinhardtii HOM05D004436 ORTHO05D005179 2.4e-06 57.8 234 25.6


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