Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p39700 Brassica napus HOM05D000448 ORTHO05D000291 9.3e-47 189.9 98 100.0
Thhalv10022156m.g Eutrema salsugineum HOM05D000448 ORTHO05D000291 1.4e-18 96.3 133 49.6
BolC5t34046H Brassica oleracea HOM05D000448 ORTHO05D000291 2.4e-18 95.5 139 46.8
Sp3g12190 Schrenkiella parvula HOM05D000448 ORTHO05D000291 2.4e-18 95.5 138 48.6
BcaB06g25417 Brassica carinata HOM05D000448 ORTHO05D000291 4.1e-18 94.7 138 47.1
A05p35470 Brassica napus HOM05D000448 ORTHO05D000291 5.3e-18 94.4 139 46.8
C05p53780 Brassica napus HOM05D000448 ORTHO05D000291 5.3e-18 94.4 139 46.8
BraA05t22357Z Brassica rapa HOM05D000448 ORTHO05D000291 5.3e-18 94.4 139 46.8
CARHR088760 Cardamine hirsuta HOM05D000448 ORTHO05D000291 7.7e-17 90.5 133 47.4
CARHR256100 Cardamine hirsuta HOM05D000448 ORTHO05D000291 5.0e-16 87.8 136 47.8
BcaC06g34956 Brassica carinata HOM05D000448 ORTHO05D000291 6.5e-16 87.4 128 49.2
BolC7t42665H Brassica oleracea HOM05D000448 ORTHO05D000291 6.5e-16 87.4 128 49.2
Carub.0003s1352 Capsella rubella HOM05D000448 ORTHO05D000291 1.1e-15 86.7 136 48.5
BraA08t34782Z Brassica rapa HOM05D000448 ORTHO05D000291 4.2e-15 84.7 127 48.0
A08p28540 Brassica napus HOM05D000448 ORTHO05D000291 5.5e-15 84.3 127 47.2
AL3G26140 Arabidopsis lyrata HOM05D000448 ORTHO05D000291 2.1e-14 82.4 136 46.3
AT3G13950 Arabidopsis thaliana HOM05D000448 ORTHO05D000291 2.7e-14 82.0 136 46.3
AL795U10010 Arabidopsis lyrata HOM05D000448 ORTHO05D000291 5.2e-13 77.8 47 83.0
Aa31LG8G1140 Aethionema arabicum HOM05D000448 ORTHO05D000291 1.5e-12 76.3 134 44.8
BcaB03g11909 Brassica carinata HOM05D000448 ORTHO05D000291 1.5e-12 76.3 43 86.0
BcaC07g39158 Brassica carinata HOM05D000448 ORTHO05D000291 1.5e-12 76.3 43 88.4
C08p21510 Brassica napus HOM05D000448 ORTHO05D000291 1.5e-12 76.3 43 88.4
BolC8t49791H Brassica oleracea HOM05D000448 ORTHO05D000291 1.5e-12 76.3 43 88.4
THA.LOC104815630 Tarenaya hassleriana HOM05D000448 ORTHO05D000291 5.7e-12 74.3 137 40.9
AL9U10580 Arabidopsis lyrata HOM05D000448 ORTHO05D000291 8.3e-11 70.5 134 38.8
Aa31LG2G18310 Aethionema arabicum HOM05D000448 ORTHO05D000291 1.8e-10 69.3 39 82.1
Aa31LG10G13200 Aethionema arabicum HOM05D000448 ORTHO05D000291 4.1e-10 68.2 139 38.1
AT4G13266 Arabidopsis thaliana HOM05D000448 ORTHO05D000291 5.4e-10 67.8 134 36.6
Carub.0007s2994 Capsella rubella HOM05D000448 ORTHO05D000291 7.0e-10 67.4 126 40.5
Carub.0007s2992 Capsella rubella HOM05D000448 ORTHO05D000291 1.0e-08 63.5 99 49.5
THA.LOC104810361 Tarenaya hassleriana HOM05D000448 ORTHO05D000291 2.9e-08 62.0 49 61.2
Aa31LG7G11610 Aethionema arabicum HOM05D000448 ORTHO05D000291 4.2e-07 58.2 51 54.9
THA.LOC104822771 Tarenaya hassleriana HOM05D000448 ORTHO05D000291 2.7e-06 55.5 41 63.4


User provided reference genes

Program Settings