Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p38240 Brassica napus HOM05D008154 ORTHO05D012553 9.2e-95 350.1 167 100.0
BraA01t03880Z Brassica rapa HOM05D008154 ORTHO05D012553 2.7e-94 348.6 167 99.4
C01p48500 Brassica napus HOM05D008154 ORTHO05D012553 4.6e-94 347.8 167 99.4
BcaC09g48565 Brassica carinata HOM05D008154 ORTHO05D012553 6.0e-94 347.4 167 98.8
BolC1t04810H Brassica oleracea HOM05D008154 ORTHO05D012553 6.0e-94 347.4 167 98.8
BcaB04g20900 Brassica carinata HOM05D008154 ORTHO05D012553 3.1e-90 335.1 167 93.4
A05p33540 Brassica napus HOM05D008154 ORTHO05D012553 5.8e-89 330.9 167 92.8
BraA05t22175Z Brassica rapa HOM05D008154 ORTHO05D012553 5.8e-89 330.9 167 92.8
Thhalv10022366m.g Eutrema salsugineum HOM05D008154 ORTHO05D012553 1.3e-88 329.7 167 92.2
BraA05t22176Z Brassica rapa HOM05D008154 ORTHO05D012553 1.7e-88 329.3 167 92.2
Sp3g14190 Schrenkiella parvula HOM05D008154 ORTHO05D012553 1.7e-88 329.3 167 94.6
AT3G15860 Arabidopsis thaliana HOM05D008154 ORTHO05D012553 1.9e-87 325.9 171 90.1
C05p50530 Brassica napus HOM05D008154 ORTHO05D012553 4.1e-87 324.7 165 90.3
BolC5t33799H Brassica oleracea HOM05D008154 ORTHO05D012553 3.5e-86 321.6 165 89.7
CARHR090960 Cardamine hirsuta HOM05D008154 ORTHO05D012553 2.8e-83 312.0 164 87.8
Carub.0003s1560 Capsella rubella HOM05D008154 ORTHO05D012553 1.9e-79 299.3 166 84.9
BcaC05g28926 Brassica carinata HOM05D008154 ORTHO05D012553 8.6e-77 290.4 165 82.4
Aa31LG8G3050 Aethionema arabicum HOM05D008154 ORTHO05D012553 3.6e-75 285.0 165 75.8
THA.LOC104810614 Tarenaya hassleriana HOM05D008154 ORTHO05D012553 1.8e-45 186.4 146 63.0
BcaB04g19751 Brassica carinata HOM05D008154 ORTHO05D012557 5.5e-31 138.3 162 46.9
THA.LOC104811313 Tarenaya hassleriana HOM05D008154 ORTHO05D012557 1.2e-30 137.1 166 45.8
BraA09t36243Z Brassica rapa HOM05D008154 ORTHO05D012557 1.6e-30 136.7 157 45.2
C09p06570 Brassica napus HOM05D008154 ORTHO05D012557 3.6e-30 135.6 157 45.2
A09p06010 Brassica napus HOM05D008154 ORTHO05D012557 6.1e-30 134.8 136 49.3
Thhalv10005491m.g Eutrema salsugineum HOM05D008154 ORTHO05D012557 7.9e-30 134.4 156 44.9
Carub.0006s2384 Capsella rubella HOM05D008154 ORTHO05D012557 2.3e-29 132.9 161 46.0
AL6G38080 Arabidopsis lyrata HOM05D008154 ORTHO05D012557 5.1e-29 131.7 136 48.5
A02p39190 Brassica napus HOM05D008154 ORTHO05D012557 5.1e-29 131.7 163 44.8
Sp2g21640 Schrenkiella parvula HOM05D008154 ORTHO05D012557 5.1e-29 131.7 156 43.6
BolC2t11938H Brassica oleracea HOM05D008154 ORTHO05D012557 8.8e-29 131.0 163 43.6
BcaC03g17839 Brassica carinata HOM05D008154 ORTHO05D012557 1.1e-28 130.6 136 47.8
C02p58790 Brassica napus HOM05D008154 ORTHO05D012557 1.1e-28 130.6 136 47.8
BraA02t08884Z Brassica rapa HOM05D008154 ORTHO05D012557 1.1e-28 130.6 163 44.2
BcaB07g29945 Brassica carinata HOM05D008154 ORTHO05D012557 2.6e-28 129.4 135 48.1
CARHR187360 Cardamine hirsuta HOM05D008154 ORTHO05D012557 2.6e-28 129.4 163 41.7
AT5G26090 Arabidopsis thaliana HOM05D008154 ORTHO05D012557 3.3e-28 129.0 136 46.3
BolC9t53583H Brassica oleracea HOM05D008154 ORTHO05D012557 5.7e-28 128.3 137 48.2
BcaB07g32008 Brassica carinata HOM05D008154 ORTHO05D012557 2.8e-27 125.9 135 47.4
Aa31LG11G5040 Aethionema arabicum HOM05D008154 ORTHO05D012557 8.2e-27 124.4 162 41.4
BcaC04g23600 Brassica carinata HOM05D008154 ORTHO05D012557 3.8e-24 115.5 158 41.1
Sp3g14170 Schrenkiella parvula HOM05D008154 ORTHO05D012553 1.5e-20 103.6 79 67.1
BcaC03g13395 Brassica carinata HOM05D008154 ORTHO05D012061 9.7e-20 100.9 157 35.0
C02p05410 Brassica napus HOM05D008154 ORTHO05D012061 9.7e-20 100.9 157 35.0
A02p01230 Brassica napus HOM05D008154 ORTHO05D012061 1.3e-19 100.5 157 35.0
BolC2t06489H Brassica oleracea HOM05D008154 ORTHO05D012061 1.3e-19 100.5 157 35.0
BraA02t05102Z Brassica rapa HOM05D008154 ORTHO05D012061 1.3e-19 100.5 157 35.0
Sp6g31770 Schrenkiella parvula HOM05D008154 ORTHO05D012061 8.2e-19 97.8 157 36.3
Thhalv10015823m.g Eutrema salsugineum HOM05D008154 ORTHO05D012061 4.1e-18 95.5 157 35.0
BcaNung02650 Brassica carinata HOM05D008154 ORTHO05D012061 7.0e-18 94.7 157 34.4
THA.LOC104810616 Tarenaya hassleriana HOM05D008154 ORTHO05D406818 2.6e-17 92.8 167 31.7
THA.LOC104799699 Tarenaya hassleriana HOM05D008154 ORTHO05D012061 3.5e-17 92.4 161 34.2
C07p41900 Brassica napus HOM05D008154 ORTHO05D012061 1.3e-16 90.5 169 33.1
BolC7t44720H Brassica oleracea HOM05D008154 ORTHO05D012061 1.7e-16 90.1 169 33.1
BcaB04g19752 Brassica carinata HOM05D008154 ORTHO05D012061 5.0e-16 88.6 175 32.0
BcaC04g23599 Brassica carinata HOM05D008154 ORTHO05D012061 5.0e-16 88.6 175 32.6
A06p36580 Brassica napus HOM05D008154 ORTHO05D012061 6.5e-16 88.2 168 32.7
BraA06t26584Z Brassica rapa HOM05D008154 ORTHO05D012061 6.5e-16 88.2 169 32.5
THA.LOC104811241 Tarenaya hassleriana HOM05D008154 ORTHO05D012061 1.1e-15 87.4 161 34.2
AL6G22580 Arabidopsis lyrata HOM05D008154 ORTHO05D012061 1.5e-15 87.0 160 31.2
BcaB01g05451 Brassica carinata HOM05D008154 ORTHO05D012061 1.9e-15 86.7 155 33.5
Carub.0006s1036 Capsella rubella HOM05D008154 ORTHO05D012061 1.9e-15 86.7 160 30.6
BcaNung03981 Brassica carinata HOM05D008154 ORTHO05D012061 3.2e-15 85.9 169 31.4
AT5G11830 Arabidopsis thaliana HOM05D008154 ORTHO05D012061 1.2e-14 84.0 160 30.0
CARHR090950 Cardamine hirsuta HOM05D008154 ORTHO05D012553 4.7e-14 82.0 48 81.2
CARHR201330 Cardamine hirsuta HOM05D008154 ORTHO05D012061 1.4e-13 80.5 160 33.1
CARHR187350 Cardamine hirsuta HOM05D008154 ORTHO05D012061 2.3e-13 79.7 157 31.8
Sp2g21650 Schrenkiella parvula HOM05D008154 ORTHO05D012061 4.0e-13 79.0 174 29.9
BcaNung03980 Brassica carinata HOM05D008154 ORTHO05D012061 1.0e-08 64.3 122 30.3


User provided reference genes

Program Settings