Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p38150 Brassica napus HOM05D008216 ORTHO05D011188 7.6e-262 906.7 498 100.0
BraA01t03873Z Brassica rapa HOM05D008216 ORTHO05D011188 8.1e-256 886.7 510 97.1
BolC1t04800H Brassica oleracea HOM05D008216 ORTHO05D011188 1.1e-255 886.3 516 95.5
C01p48400 Brassica napus HOM05D008216 ORTHO05D011188 1.4e-255 885.9 509 96.7
BcaC09g48576 Brassica carinata HOM05D008216 ORTHO05D011188 3.5e-251 871.3 498 97.0
BcaB04g20890 Brassica carinata HOM05D008216 ORTHO05D011188 8.8e-210 733.8 463 89.2
Thhalv10022078m.g Eutrema salsugineum HOM05D008216 ORTHO05D011188 1.5e-113 414.1 500 52.2
Sp3g14300 Schrenkiella parvula HOM05D008216 ORTHO05D011188 2.3e-109 400.2 533 50.8
AT3G15960 Arabidopsis thaliana HOM05D008216 ORTHO05D011188 1.2e-84 318.2 538 42.2
BolC3t17077H Brassica oleracea HOM05D008216 ORTHO05D011188 7.0e-74 282.3 305 55.1
BcaC01g03848 Brassica carinata HOM05D008216 ORTHO05D011188 1.5e-71 274.6 508 41.3
C03p47970 Brassica napus HOM05D008216 ORTHO05D011188 3.2e-66 256.9 375 45.6
BcaB04g18868 Brassica carinata HOM05D008216 ORTHO05D011188 2.9e-51 207.2 223 55.2
BcaB02g10995 Brassica carinata HOM05D008216 ORTHO05D011188 1.9e-50 204.5 273 44.3
A05p19020 Brassica napus HOM05D008216 ORTHO05D011188 4.1e-50 203.4 273 44.7
BraA05t20799Z Brassica rapa HOM05D008216 ORTHO05D011188 1.6e-49 201.4 287 43.6
Carub.0001s4140 Capsella rubella HOM05D008216 ORTHO05D011188 6.0e-49 199.5 292 44.2
BcaC08g43993 Brassica carinata HOM05D008216 ORTHO05D011188 1.0e-48 198.7 281 43.4
C06p13990 Brassica napus HOM05D008216 ORTHO05D011188 1.0e-48 198.7 281 43.4
BolC6t36576H Brassica oleracea HOM05D008216 ORTHO05D011188 1.0e-48 198.7 281 43.4
BcaB04g20891 Brassica carinata HOM05D008216 ORTHO05D012788 1.3e-48 198.4 295 43.1
AT1G52410 Arabidopsis thaliana HOM05D008216 ORTHO05D011188 1.9e-47 194.5 294 44.2
BcaC08g43426 Brassica carinata HOM05D008216 ORTHO05D011188 9.6e-47 192.2 276 42.4
A06p01810 Brassica napus HOM05D008216 ORTHO05D011188 9.6e-47 192.2 276 42.4
C06p07930 Brassica napus HOM05D008216 ORTHO05D011188 9.6e-47 192.2 276 42.0
BolC6t35876H Brassica oleracea HOM05D008216 ORTHO05D011188 9.6e-47 192.2 276 42.0
BcaC09g48575 Brassica carinata HOM05D008216 ORTHO05D012788 1.2e-46 191.8 295 41.0
C01p48410 Brassica napus HOM05D008216 ORTHO05D012788 1.2e-46 191.8 295 41.0
C01p48420 Brassica napus HOM05D008216 ORTHO05D012788 2.1e-46 191.0 296 40.9
Sp1g39030 Schrenkiella parvula HOM05D008216 ORTHO05D011188 2.1e-46 191.0 294 40.5
A01p38160 Brassica napus HOM05D008216 ORTHO05D012788 4.7e-46 189.9 295 40.7
BraA01t03874Z Brassica rapa HOM05D008216 ORTHO05D012788 4.7e-46 189.9 295 40.7
BcaB06g25696 Brassica carinata HOM05D008216 ORTHO05D012788 6.2e-46 189.5 293 41.6
Sp3g14290 Schrenkiella parvula HOM05D008216 ORTHO05D012788 6.2e-46 189.5 295 42.4
CARHR042550 Cardamine hirsuta HOM05D008216 ORTHO05D011188 8.1e-46 189.1 290 42.1
AL1G60670 Arabidopsis lyrata HOM05D008216 ORTHO05D011188 1.4e-45 188.3 300 41.3
BcaC05g28920 Brassica carinata HOM05D008216 ORTHO05D012788 1.4e-45 188.3 287 41.8
C05p50470 Brassica napus HOM05D008216 ORTHO05D012788 1.4e-45 188.3 287 41.8
Sp3g14310 Schrenkiella parvula HOM05D008216 ORTHO05D011188 1.8e-45 188.0 251 48.2
Thhalv10011252m.g Eutrema salsugineum HOM05D008216 ORTHO05D011188 2.4e-45 187.6 295 41.7
BolC5t33794H Brassica oleracea HOM05D008216 ORTHO05D012788 3.1e-45 187.2 287 41.8
BraA06t23398Z Brassica rapa HOM05D008216 ORTHO05D011188 3.1e-45 187.2 276 40.9
A05p33490 Brassica napus HOM05D008216 ORTHO05D012788 5.2e-45 186.4 275 42.2
BraA05t22171Z Brassica rapa HOM05D008216 ORTHO05D012788 6.9e-45 186.0 275 42.2
SpUN0970_0010 Schrenkiella parvula HOM05D008216 ORTHO05D011188 1.7e-43 181.4 286 44.1
Aa31LG10G2510 Aethionema arabicum HOM05D008216 ORTHO05D011188 2.9e-43 180.6 266 42.5
BcaC09g48573 Brassica carinata HOM05D008216 ORTHO05D012788 6.4e-43 179.5 295 39.3
BolC1t04801H Brassica oleracea HOM05D008216 ORTHO05D012788 6.4e-43 179.5 295 39.3
Carub.0003s1569 Capsella rubella HOM05D008216 ORTHO05D012788 2.4e-42 177.6 294 40.1
Thhalv10020122m.g Eutrema salsugineum HOM05D008216 ORTHO05D012788 1.6e-41 174.9 248 42.7
AL3G28590 Arabidopsis lyrata HOM05D008216 ORTHO05D012788 3.0e-40 170.6 295 39.3
CARHR091090 Cardamine hirsuta HOM05D008216 ORTHO05D012788 3.9e-40 170.2 274 42.0
THA.LOC104818006 Tarenaya hassleriana HOM05D008216 ORTHO05D011188 8.7e-40 169.1 306 40.5
AT3G15950 Arabidopsis thaliana HOM05D008216 ORTHO05D012788 1.9e-31 141.4 295 35.6
CARHR090970 Cardamine hirsuta HOM05D008216 ORTHO05D011188 4.3e-31 140.2 195 45.6
AL3G28600 Arabidopsis lyrata HOM05D008216 ORTHO05D011188 4.5e-28 130.2 107 63.6
BcaB04g18008 Brassica carinata HOM05D008216 ORTHO05D024112 4.8e-14 83.6 189 36.0
SpUn0637_0010 Schrenkiella parvula HOM05D008216 ORTHO05D011188 7.2e-10 69.7 150 39.3
BolC4t24136H Brassica oleracea HOM05D029889 ORTHO05D024112 1.1e-07 62.4 88 44.3


User provided reference genes

Program Settings