Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p37150 Brassica napus HOM05D026427 ORTHO05D027957 6.0e-28 126.7 61 100.0
BraA01t03776Z Brassica rapa HOM05D026427 ORTHO05D027957 1.8e-27 125.2 61 98.4
BolC1t04675H Brassica oleracea HOM05D026427 ORTHO05D027957 1.2e-23 112.5 60 90.0
C01p47090 Brassica napus HOM05D026427 ORTHO05D027957 9.3e-21 102.8 60 85.0
Sp3g15360 Schrenkiella parvula HOM05D009524 ORTHO05D014763 1.1e-13 79.3 50 70.0
AL3G30140 Arabidopsis lyrata HOM05D009524 ORTHO05D001207 2.1e-12 75.1 50 68.0
Thhalv10022234m.g Eutrema salsugineum HOM05D009524 ORTHO05D001207 2.3e-11 71.6 50 68.0
BcaB04g20861 Brassica carinata HOM05D009524 ORTHO05D001207 5.1e-11 70.5 52 67.3
AT3G17152 Arabidopsis thaliana HOM05D009524 ORTHO05D001207 6.7e-11 70.1 48 66.7
Carub.0003s1690 Capsella rubella HOM05D009524 ORTHO05D001207 3.3e-10 67.8 50 58.0
CARHR092410 Cardamine hirsuta HOM05D009524 ORTHO05D001207 2.8e-09 64.7 50 58.0
C03p08210 Brassica napus HOM05D009524 ORTHO05D001207 1.8e-08 62.0 52 63.5
Aa31LG8G4150 Aethionema arabicum HOM05D009524 ORTHO05D001207 2.4e-08 61.6 49 55.1
AL3G30130 Arabidopsis lyrata HOM05D009524 ORTHO05D001207 4.1e-08 60.8 50 60.0
BcaB04g20860 Brassica carinata HOM05D009524 ORTHO05D001207 4.1e-08 60.8 51 56.9
CARHR092420 Cardamine hirsuta HOM05D009524 ORTHO05D001207 4.1e-08 60.8 50 54.0
AT3G17150 Arabidopsis thaliana HOM05D009524 ORTHO05D001207 5.3e-08 60.5 50 58.0
BolC3t13318H Brassica oleracea HOM05D009524 ORTHO05D001207 5.3e-08 60.5 52 61.5
BcaB04g20858 Brassica carinata HOM05D009524 ORTHO05D001207 1.5e-07 58.9 52 59.6
Thhalv10022317m.g Eutrema salsugineum HOM05D009524 ORTHO05D001207 2.0e-07 58.5 50 52.0
BolC1t04674H Brassica oleracea HOM05D009524 ORTHO05D001207 4.5e-07 57.4 52 57.7
Cpa.g.sc9.24 Carica papaya HOM05D001578 ORTHO05D001207 5.9e-07 57.0 50 48.0
A03p07210 Brassica napus HOM05D009524 ORTHO05D001207 1.0e-06 56.2 52 57.7
BraA03t10043Z Brassica rapa HOM05D009524 ORTHO05D001207 1.0e-06 56.2 52 57.7
BcaC09g48672 Brassica carinata HOM05D009524 ORTHO05D001207 2.2e-06 55.1 52 55.8
C01p47080 Brassica napus HOM05D009524 ORTHO05D001207 2.2e-06 55.1 52 55.8
THA.LOC104802609 Tarenaya hassleriana HOM05D009524 ORTHO05D001207 2.9e-06 54.7 49 49.0
A01p37140 Brassica napus HOM05D009524 ORTHO05D001207 3.8e-06 54.3 52 55.8
BraA01t03775Z Brassica rapa HOM05D009524 ORTHO05D001207 3.8e-06 54.3 52 55.8


User provided reference genes

Program Settings