Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p37120 Brassica napus HOM05D003146 ORTHO05D001819 4.5e-92 341.3 177 100.0
C01p47000 Brassica napus HOM05D003146 ORTHO05D001819 1.3e-70 270.0 147 93.9
BolC1t04668H Brassica oleracea HOM05D003146 ORTHO05D001819 1.3e-70 270.0 147 93.9
BcaC09g48680 Brassica carinata HOM05D003146 ORTHO05D001819 1.7e-70 269.6 147 93.2
BraA01t03769Z Brassica rapa HOM05D003146 ORTHO05D001819 8.9e-64 247.3 129 99.2
BcaB04g20850 Brassica carinata HOM05D003146 ORTHO05D001819 6.8e-56 221.1 173 67.6
BcaC09g48683 Brassica carinata HOM05D003146 ORTHO05D001819 2.2e-54 216.1 175 67.4
C01p46950 Brassica napus HOM05D003146 ORTHO05D001819 2.2e-54 216.1 175 67.4
C01p46980 Brassica napus HOM05D003146 ORTHO05D001819 2.2e-54 216.1 175 67.4
BolC1t04666H Brassica oleracea HOM05D003146 ORTHO05D001819 2.2e-54 216.1 175 67.4
A01p37050 Brassica napus HOM05D003146 ORTHO05D001819 2.4e-53 212.6 175 66.9
BraA01t03766Z Brassica rapa HOM05D003146 ORTHO05D001819 3.2e-53 212.2 175 66.3
Sp3g15430 Schrenkiella parvula HOM05D003146 ORTHO05D001819 1.6e-49 199.9 175 62.3
Thhalv10022367m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 4.7e-49 198.4 163 62.6
AL3G30250 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 7.6e-47 191.0 175 58.3
AT3G17220 Arabidopsis thaliana HOM05D003146 ORTHO05D001819 8.4e-46 187.6 175 57.7
CARHR092490 Cardamine hirsuta HOM05D003146 ORTHO05D001819 1.1e-45 187.2 175 59.4
Carub.0003s1698 Capsella rubella HOM05D003146 ORTHO05D001819 3.0e-43 179.1 175 56.6
A01p37070 Brassica napus HOM05D003146 ORTHO05D001819 1.3e-41 173.7 90 100.0
Aa31LG8G4190 Aethionema arabicum HOM05D003146 ORTHO05D001819 1.6e-36 156.8 160 53.1
THA.LOC104820282 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.6e-28 130.2 164 45.1
THA.LOC104825373 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 3.9e-27 125.6 164 43.3
THA.LOC104816708 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 5.1e-27 125.2 164 43.3
THA.LOC104808963 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.3e-25 120.6 164 45.1
THA.LOC104817105 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.6e-25 120.2 164 42.1
THA.LOC104802649 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 5.5e-21 105.1 182 36.3
THA.LOC104803096 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 2.1e-20 103.2 182 34.1
THA.LOC104802648 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 7.9e-20 101.3 171 33.9
Sed0025500 Sechium edule HOM05D003146 ORTHO05D001819 1.0e-19 100.9 173 35.8
Carub.0001s3713 Capsella rubella HOM05D003146 ORTHO05D001819 1.5e-18 97.1 177 36.2
BcaB04g20853 Brassica carinata HOM05D003146 ORTHO05D001819 1.9e-18 96.7 75 68.0
Aa31LG10G5790 Aethionema arabicum HOM05D003146 ORTHO05D001819 5.7e-18 95.1 176 35.8
Thhalv10012260m.g Eutrema salsugineum HOM05D008385 ORTHO05D001819 3.7e-17 92.4 182 30.2
Thhalv10011818m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 2.4e-16 89.7 177 34.5
MELO3C034932.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.9e-16 88.2 169 36.1
CARHR037660 Cardamine hirsuta HOM05D003146 ORTHO05D001819 1.5e-15 87.0 177 33.9
MELO3C027265.2 Cucumis melo HOM05D003146 ORTHO05D001819 7.6e-15 84.7 169 35.5
MELO3C001332.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.7e-14 83.6 172 32.0
MELO3C027398.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.2e-14 83.2 173 34.1
MELO3C027828.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.9e-14 82.8 145 35.2
CsaV3_UNG225750 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.9e-14 82.8 171 33.9
MELO3C025842.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.8e-14 82.4 169 34.3
MELO3C028122.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.0e-14 82.0 167 31.7
Aa31LG10G5720 Aethionema arabicum HOM05D008385 ORTHO05D001819 6.5e-14 81.6 160 30.0
MELO3C027585.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.5e-14 81.6 169 33.7
Aa31LG10G5700 Aethionema arabicum HOM05D008385 ORTHO05D001819 8.4e-14 81.3 173 27.2
MELO3C028017.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.4e-14 81.3 176 31.2
CsaV3_UNG084670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 8.4e-14 81.3 168 33.3
CsaV3_UNG132030 Cucumis sativus L. HOM05D003146 ORTHO05D001819 8.4e-14 81.3 168 33.3
MELO3C034829.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.1e-13 80.9 166 30.7
MELO3C000387.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.4e-13 80.5 172 30.8
MELO3C019867.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.4e-13 80.5 172 31.4
BraA05t21032Z Brassica rapa HOM05D003146 ORTHO05D001819 1.9e-13 80.1 177 31.1
MELO3C027590.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.5e-13 79.7 145 34.5
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 2.5e-13 79.7 179 32.4
Sed0022729 Sechium edule HOM05D003146 ORTHO05D001819 2.5e-13 79.7 146 35.6
MELO3C034867.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.2e-13 79.3 167 30.5
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 5.5e-13 78.6 182 31.3
A05p21240 Brassica napus HOM05D003146 ORTHO05D001819 9.3e-13 77.8 177 30.5
MELO3C000722.2 Cucumis melo HOM05D003146 ORTHO05D001819 9.3e-13 77.8 176 31.2
MELO3C019866.2 Cucumis melo HOM05D003146 ORTHO05D001819 9.3e-13 77.8 172 29.7
MELO3C032509.2 Cucumis melo HOM05D003146 ORTHO05D001819 9.3e-13 77.8 176 30.1
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 1.2e-12 77.4 153 30.1
BcaC05g27598 Brassica carinata HOM05D003146 ORTHO05D001819 2.1e-12 76.6 177 30.5
C05p35840 Brassica napus HOM05D003146 ORTHO05D001819 2.1e-12 76.6 177 30.5
BolC5t32301H Brassica oleracea HOM05D003146 ORTHO05D001819 2.1e-12 76.6 177 30.5
ClCG11G011230 Citrullus lanatus HOM05D003146 ORTHO05D001819 2.1e-12 76.6 143 32.9
MELO3C019864.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.1e-12 76.6 175 30.9
THA.LOC104801632 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 2.1e-12 76.6 183 30.1
ClCG09G008860 Citrullus lanatus HOM05D003146 ORTHO05D001819 2.7e-12 76.3 164 31.7
MELO3C035196.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.5e-12 75.9 165 32.7
MELO3C027044.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.1e-12 75.1 167 29.3
MELO3C030065.2 Cucumis melo HOM05D003146 ORTHO05D001819 7.9e-12 74.7 175 30.3
THA.LOC104810183 Tarenaya hassleriana HOM05D008385 ORTHO05D001819 7.9e-12 74.7 183 29.0
THA.LOC104810184 Tarenaya hassleriana HOM05D008385 ORTHO05D001819 7.9e-12 74.7 183 29.0
MELO3C032417.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.0e-11 74.3 175 30.9
Cc11_g04920 Coffea canephora HOM05D003146 ORTHO05D001819 1.8e-11 73.6 170 27.1
MELO3C030077.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.8e-11 73.6 175 30.9
A03p29810 Brassica napus HOM05D008385 ORTHO05D001819 5.1e-11 72.0 180 28.9
Nitab4.5_0010452g0030 Nicotiana tabacum HOM05D003146 ORTHO05D001819 6.7e-11 71.6 151 27.8
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 2.5e-10 69.7 162 28.4
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 2.5e-10 69.7 145 30.3
PGSC0003DMG400034620 Solanum tuberosum HOM05D003146 ORTHO05D001819 2.5e-10 69.7 152 27.6
Rhsim04G0244100 Rhododendron simsii HOM05D003146 ORTHO05D001819 3.3e-10 69.3 175 29.7
MELO3C030064.2 Cucumis melo HOM05D003146 ORTHO05D001819 7.4e-10 68.2 175 28.6
MELO3C027625.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.3e-09 67.4 117 34.2
Actinidia14750 Actinidia chinensis HOM05D009438 ORTHO05D010870 2.8e-09 66.2 175 23.4
Medtr8g032810 Medicago truncatula HOM05D007995 ORTHO05D001819 2.8e-09 66.2 174 28.2
THA.LOC104825839 Tarenaya hassleriana HOM05D008385 ORTHO05D001819 2.8e-09 66.2 170 29.4
Rhsim07G0137900 Rhododendron simsii HOM05D009438 ORTHO05D010870 3.7e-09 65.9 145 26.2
C03p36070 Brassica napus HOM05D008385 ORTHO05D010806 6.3e-09 65.1 180 27.2
CsaV3_6G022330 Cucumis sativus L. HOM05D003146 ORTHO05D001819 8.2e-09 64.7 104 36.5
CAN.G338.39 Capsicum annuum HOM05D003146 ORTHO05D001819 1.1e-08 64.3 175 25.1
vmacro07979 Vaccinium macrocarpon HOM05D003146 ORTHO05D001819 1.1e-08 64.3 173 28.3
Actinidia18487 Actinidia chinensis HOM05D003146 ORTHO05D001819 1.4e-08 63.9 101 35.6
Rhsim06G0181100 Rhododendron simsii HOM05D009438 ORTHO05D001819 1.4e-08 63.9 137 27.7
Medtr4g025010 Medicago truncatula HOM05D007995 ORTHO05D001819 1.8e-08 63.5 177 29.4
Dinv22854 Davidia involucrata HOM05D009438 ORTHO05D010870 2.4e-08 63.2 157 25.5
Ciclev10002621m.g Citrus clementina HOM05D001578 ORTHO05D001207 3.1e-08 62.8 141 30.5
Actinidia36483 Actinidia chinensis HOM05D000573 ORTHO05D001819 4.1e-08 62.4 147 25.2
Ca_06775_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 4.1e-08 62.4 165 28.5
Ciclev10004017m.g Citrus clementina HOM05D001578 ORTHO05D001207 4.1e-08 62.4 143 30.8
Oeu000482.1 Olea europaea HOM05D009438 ORTHO05D010870 4.1e-08 62.4 183 24.6
Solyc03g112180.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 4.1e-08 62.4 169 25.4
PGSC0003DMG400003833 Solanum tuberosum HOM05D003146 ORTHO05D001819 4.1e-08 62.4 145 25.5
Ciclev10003542m.g Citrus clementina HOM05D001578 ORTHO05D001207 5.3e-08 62.0 141 29.8
Peaxi162Scf00089g00132 Petunia axillaris HOM05D003146 ORTHO05D001819 6.9e-08 61.6 184 23.4
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 6.9e-08 61.6 112 30.4
Actinidia18154 Actinidia chinensis HOM05D009438 ORTHO05D010870 1.2e-07 60.8 143 24.5
MD16G1147400 Malus domestica HOM05D003146 ORTHO05D001819 1.2e-07 60.8 137 25.5
Medtr6g023915 Medicago truncatula HOM05D007995 ORTHO05D001819 1.2e-07 60.8 164 24.4
Dinv22851 Davidia involucrata HOM05D009438 ORTHO05D010870 1.5e-07 60.5 145 24.8
Dinv22852 Davidia involucrata HOM05D009438 ORTHO05D010870 1.5e-07 60.5 145 24.8
Dinv22853 Davidia involucrata HOM05D009438 ORTHO05D010870 1.5e-07 60.5 145 24.8
Rhsim07G0138100 Rhododendron simsii HOM05D009438 ORTHO05D010870 1.5e-07 60.5 145 24.8
Dinv22850 Davidia involucrata HOM05D009438 ORTHO05D010870 2.0e-07 60.1 145 24.8
ClCG06G004590 Citrullus lanatus HOM05D003146 ORTHO05D001819 3.4e-07 59.3 110 32.7
Medtr6g023995 Medicago truncatula HOM05D007995 ORTHO05D001819 4.5e-07 58.9 102 28.4
PGR004G2081 Punica granatum HOM05D003146 ORTHO05D001819 4.5e-07 58.9 166 26.5
Migut.I00086 Erythranthe guttata HOM05D062370 ORTHO05D001819 5.9e-07 58.5 154 22.7
Eucgr.H04068 Eucalyptus grandis HOM05D001578 ORTHO05D001207 5.9e-07 58.5 144 26.4
Eucgr.L02840 Eucalyptus grandis HOM05D001578 ORTHO05D001207 5.9e-07 58.5 144 26.4
Lalb_Chr12g0200781 Lupinus albus HOM05D001578 ORTHO05D001207 1.0e-06 57.8 168 25.6
Manes.10G035700 Manihot esculenta HOM05D004113 ORTHO05D005233 1.0e-06 57.8 162 28.4
PSO026G0001 Papaver somniferum HOM05D001445 ORTHO05D001261 1.0e-06 57.8 181 26.0
Medtr6g023935 Medicago truncatula HOM05D007995 ORTHO05D001819 1.3e-06 57.4 169 23.1
CiPaw.01G136000 Carya illinoinensis HOM05D001578 ORTHO05D001207 1.7e-06 57.0 119 27.7
Ca_31166_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 1.7e-06 57.0 130 29.2
MELO3C028207.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.7e-06 57.0 101 32.7
CsaV3_UNG044260 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.2e-06 56.6 83 38.6
CsaV3_UNG083670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.2e-06 56.6 83 38.6
Manes.10G035200 Manihot esculenta HOM05D004113 ORTHO05D005233 2.2e-06 56.6 162 27.8
Sed0025474 Sechium edule HOM05D003146 ORTHO05D001819 2.9e-06 56.2 169 26.6
Aa31LG10G5710 Aethionema arabicum HOM05D008385 ORTHO05D010806 3.8e-06 55.8 147 27.2
Medtr6g024035 Medicago truncatula HOM05D007995 ORTHO05D001819 5.0e-06 55.5 172 26.2
Nn1g00650 Nelumbo nucifera HOM05D001445 ORTHO05D001261 5.0e-06 55.5 132 25.8
PSO081G0057 Papaver somniferum HOM05D001445 ORTHO05D001261 5.0e-06 55.5 167 26.3
Manes.10G035400 Manihot esculenta HOM05D004113 ORTHO05D005233 8.5e-06 54.7 162 27.8
Prupe.3G007700 Prunus persica HOM05D001578 ORTHO05D001207 8.5e-06 54.7 130 27.7


User provided reference genes

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