Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p36460 Brassica napus HOM05D006794 ORTHO05D008322 6.5e-93 344.4 216 100.0
BraA01t03709Z Brassica rapa HOM05D006794 ORTHO05D008322 7.2e-84 314.3 217 94.0
BcaC09g48759 Brassica carinata HOM05D006794 ORTHO05D008322 4.7e-83 311.6 216 81.0
C01p46200 Brassica napus HOM05D006794 ORTHO05D008322 4.7e-83 311.6 216 81.0
BolC1t04582H Brassica oleracea HOM05D006794 ORTHO05D008322 4.7e-83 311.6 216 81.0
BcaB04g20803 Brassica carinata HOM05D006794 ORTHO05D008322 1.7e-80 303.1 216 90.7
Sp3g16080 Schrenkiella parvula HOM05D006794 ORTHO05D008322 8.3e-72 274.2 216 73.1
Thhalv10021515m.g Eutrema salsugineum HOM05D006794 ORTHO05D008322 4.6e-70 268.5 217 82.5
C03p49310 Brassica napus HOM05D006794 ORTHO05D008322 4.3e-68 261.9 215 76.7
BcaC01g03720 Brassica carinata HOM05D006794 ORTHO05D008322 5.6e-68 261.5 215 76.7
A03p40470 Brassica napus HOM05D006794 ORTHO05D008322 1.8e-66 256.5 215 74.4
Carub.0003s1768 Capsella rubella HOM05D006794 ORTHO05D008322 1.3e-64 250.4 217 80.6
BcaB04g18974 Brassica carinata HOM05D006794 ORTHO05D008322 1.1e-63 247.3 216 75.9
AL3G31120 Arabidopsis lyrata HOM05D006794 ORTHO05D008322 6.2e-59 231.5 220 78.2
CARHR093280 Cardamine hirsuta HOM05D006794 ORTHO05D008322 3.9e-53 212.2 192 80.7
AT3G17950 Arabidopsis thaliana HOM05D006794 ORTHO05D008322 6.8e-50 201.4 181 81.8
C05p26280 Brassica napus HOM05D006794 ORTHO05D008322 6.9e-34 148.3 103 80.6
THA.LOC104825595 Tarenaya hassleriana HOM05D006794 ORTHO05D008322 1.2e-33 147.5 230 47.0
CiPaw.15G144200 Carya illinoinensis HOM05D006794 ORTHO05D008322 3.4e-33 146.0 220 49.5
QL10p030576 Quercus lobata HOM05D006794 ORTHO05D008322 1.9e-31 140.2 221 48.4
Duzib084G0148 Durio zibethinus HOM05D006794 ORTHO05D008322 4.2e-31 139.0 221 46.6
CiPaw.16G095900 Carya illinoinensis HOM05D006794 ORTHO05D008322 1.3e-29 134.0 222 47.7
Cpa.g.sc3.383 Carica papaya HOM05D006794 ORTHO05D008322 8.7e-29 131.3 223 53.4
Cfa021396 Carpinus fangiana HOM05D006794 ORTHO05D008322 8.7e-29 131.3 221 53.8
Thecc.03G058000 Theobroma cacao HOM05D006794 ORTHO05D008322 5.6e-28 128.6 222 46.4
Dinv08202 Davidia involucrata HOM05D006794 ORTHO05D008322 7.4e-28 128.3 208 57.2
Duzib068G0617 Durio zibethinus HOM05D006794 ORTHO05D008322 7.4e-28 128.3 220 45.5
Lalb_Chr22g0353521 Lupinus albus HOM05D006794 ORTHO05D008322 7.4e-28 128.3 217 55.3
Cc04_g06140 Coffea canephora HOM05D006794 ORTHO05D008322 2.1e-27 126.7 219 52.1
GSVIVG01008463001 Vitis vinifera HOM05D006794 ORTHO05D008322 4.0e-26 122.5 218 45.0
Hma1.2p1_0163F.1_g073020 Hydrangea macrophylla HOM05D006794 ORTHO05D008322 1.2e-25 120.9 219 55.3
Lj2g0023485 Lotus japonicus HOM05D006794 ORTHO05D008322 2.0e-25 120.2 220 60.9
Gorai.008G290400 Gossypium raimondii HOM05D006794 ORTHO05D008322 9.9e-25 117.9 227 43.2
Manes.06G005000 Manihot esculenta HOM05D006794 ORTHO05D008322 9.9e-25 117.9 208 55.8
Sabra15G0031400 Salix brachista HOM05D006794 ORTHO05D008322 9.9e-25 117.9 222 45.5
TPR.G8635 Trifolium pratense HOM05D006794 ORTHO05D008322 9.9e-25 117.9 219 54.3
Psat4g000080 Pisum sativum HOM05D006794 ORTHO05D008322 1.3e-24 117.5 225 42.7
VMungo0251G1205 Vigna mungo HOM05D006794 ORTHO05D008322 1.7e-24 117.1 220 54.1
Phvul.002G330800 Phaseolus vulgaris HOM05D006794 ORTHO05D008322 2.2e-24 116.7 220 53.6
Potri.012G045700 Populus trichocarpa HOM05D006794 ORTHO05D008322 2.2e-24 116.7 219 56.2
Phvul.004G150000 Phaseolus vulgaris HOM05D006794 ORTHO05D008322 2.9e-24 116.3 220 54.5
Atru.chr9.1672 Acer truncatum HOM05D006794 ORTHO05D008322 3.8e-24 115.9 220 47.3
Glyma.08G055100 Glycine max HOM05D006794 ORTHO05D008322 3.8e-24 115.9 219 55.3
Medtr6g069830 Medicago truncatula HOM05D006794 ORTHO05D008322 3.8e-24 115.9 219 53.0
CSS0048798 Camellia sinensis var. sinensis HOM05D006794 ORTHO05D008322 4.9e-24 115.5 219 58.4
Glyma.09G174700 Glycine max HOM05D006794 ORTHO05D008322 4.9e-24 115.5 219 54.3
HanXRQChr01g0012541 Helianthus annuus HOM05D006794 ORTHO05D008322 4.9e-24 115.5 232 53.4
ClCG04G010570 Citrullus lanatus HOM05D006794 ORTHO05D008322 6.4e-24 115.2 219 53.9
Lalb_Chr16g0386961 Lupinus albus HOM05D006794 ORTHO05D008322 6.4e-24 115.2 216 44.0
VMungo0464G2014 Vigna mungo HOM05D006794 ORTHO05D008322 6.4e-24 115.2 220 54.1
MD14G1237200 Malus domestica HOM05D006794 ORTHO05D008322 1.1e-23 114.4 222 54.1
PGR083G0475 Punica granatum HOM05D006794 ORTHO05D008322 1.1e-23 114.4 221 54.8
Sopen03g037580 Solanum pennellii HOM05D006794 ORTHO05D008322 2.4e-23 113.2 219 53.0
RcHm_v2.0_Chr7g0178231 Rosa chinensis HOM05D006794 ORTHO05D008322 3.2e-23 112.8 216 57.4
TWI81G0550 Tripterygium wilfordii HOM05D006794 ORTHO05D008322 3.2e-23 112.8 217 50.2
TAR622G0128 Trochodendron aralioides HOM05D006794 ORTHO05D008322 4.2e-23 112.5 208 59.1
FvH4_5g17460 Fragaria vesca HOM05D006794 ORTHO05D008322 1.2e-22 110.9 216 53.2
FAN18G3906 Fragaria x ananassa HOM05D006794 ORTHO05D008322 1.2e-22 110.9 216 53.2
Solyc03g118630.3 Solanum lycopersicum HOM05D006794 ORTHO05D008322 1.2e-22 110.9 219 51.6
FAN13G2800 Fragaria x ananassa HOM05D006794 ORTHO05D008322 1.6e-22 110.5 216 50.0
Lsat_1_v5_gn_5_175480 Lactuca sativa HOM05D006794 ORTHO05D008322 1.6e-22 110.5 223 47.1
Nn4g24277 Nelumbo nucifera HOM05D006794 ORTHO05D008322 4.6e-22 109.0 225 56.0
PGSC0003DMG400005675 Solanum tuberosum HOM05D006794 ORTHO05D008322 4.6e-22 109.0 222 55.4
CANSAT80G0659 Cannabis sativa HOM05D006794 ORTHO05D008322 6.0e-22 108.6 229 52.4
Sed0024550 Sechium edule HOM05D006794 ORTHO05D008322 7.9e-22 108.2 219 51.1
Oeu046160.1 Olea europaea HOM05D006794 ORTHO05D008322 1.0e-21 107.8 217 42.4
arahy.Tifrunner.gnm1.ann1.AT27RE Arachis hypogaea HOM05D006794 ORTHO05D008322 1.3e-21 107.5 221 54.3
arahy.Tifrunner.gnm1.ann1.PNUX28 Arachis hypogaea HOM05D006794 ORTHO05D008322 1.3e-21 107.5 221 54.3
CANSAT80G2635 Cannabis sativa HOM05D006794 ORTHO05D008322 1.3e-21 107.5 225 48.4
MD06G1228000 Malus domestica HOM05D006794 ORTHO05D008322 1.8e-21 107.1 218 56.4
Nitab4.5_0001264g0020 Nicotiana tabacum HOM05D006794 ORTHO05D008322 2.3e-21 106.7 225 54.2
Eucgr.B00988 Eucalyptus grandis HOM05D006794 ORTHO05D008322 3.9e-21 105.9 217 54.8
Potri.015G036900 Populus trichocarpa HOM05D006794 ORTHO05D008322 3.9e-21 105.9 221 52.5
Prupe.5G234500 Prunus persica HOM05D006794 ORTHO05D008322 6.7e-21 105.1 218 55.0
PSO210G4985 Papaver somniferum HOM05D006794 ORTHO05D008322 1.9e-20 103.6 234 40.6
arahy.Tifrunner.gnm1.ann1.KQ26AL Arachis hypogaea HOM05D006794 ORTHO05D008322 2.5e-20 103.2 209 42.6
arahy.Tifrunner.gnm1.ann1.P2R0G6 Arachis hypogaea HOM05D006794 ORTHO05D008322 2.5e-20 103.2 209 42.6
MBI19_g22477_MAGBIO Magnolia biondii HOM05D006794 ORTHO05D008322 3.3e-20 102.8 219 43.8
Sed0017400 Sechium edule HOM05D000034 ORTHO05D000037 5.6e-20 102.1 219 51.1
Aa31LG8G4820 Aethionema arabicum HOM05D006794 ORTHO05D008322 9.6e-20 101.3 192 43.2
FAN04G0930 Fragaria x ananassa HOM05D006794 ORTHO05D008322 4.8e-19 99.0 216 51.4
FAN08G0189 Fragaria x ananassa HOM05D006794 ORTHO05D008322 6.2e-19 98.6 213 51.2
PSO832G1236 Papaver somniferum HOM05D006794 ORTHO05D008322 6.2e-19 98.6 232 39.2
ECA248G0187 Erigeron canadensis HOM05D006794 ORTHO05D008322 9.0e-18 94.7 226 49.6
Migut.D01320 Erythranthe guttata HOM05D006794 ORTHO05D008322 4.5e-17 92.4 211 39.8
Lj4g0014763 Lotus japonicus HOM05D006794 ORTHO05D008322 1.7e-16 90.5 208 40.4
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 1.7e-16 90.5 192 53.6
Ca_17183_v3 Cicer arietinum L. HOM05D006794 ORTHO05D008322 1.1e-15 87.8 96 56.2
MELO3C002138.2 Cucumis melo HOM05D006794 ORTHO05D008322 7.1e-15 85.1 89 58.4
COL.COLO4_04996 Corchorus olitorius HOM05D006794 ORTHO05D008322 9.3e-15 84.7 98 55.1
Ca_25344_v3 Cicer arietinum L. HOM05D006794 ORTHO05D008322 3.0e-13 79.7 94 55.3
DCAR_013026 Daucus carota HOM05D006794 ORTHO05D008322 3.0e-13 79.7 215 45.1
MD01G1007300 Malus domestica HOM05D006794 ORTHO05D008322 3.9e-13 79.3 207 44.9
Haze_18880 Corylus avellana HOM05D006794 ORTHO05D008322 5.1e-13 79.0 94 55.3
Gohir.A12G269600 Gossypium hirsutum HOM05D006794 ORTHO05D008322 6.7e-13 78.6 97 52.6
Psat1g031080 Pisum sativum HOM05D006794 ORTHO05D008322 6.7e-13 78.6 94 55.3
Glyma.07G103100 Glycine max HOM05D006794 ORTHO05D008322 1.1e-12 77.8 95 54.7
Gohir.D12G270100 Gossypium hirsutum HOM05D006794 ORTHO05D008322 3.3e-12 76.3 97 51.5
Sabra12G0031800 Salix brachista HOM05D006794 ORTHO05D008322 3.3e-12 76.3 99 52.5
vmacro16409 Vaccinium macrocarpon HOM05D006794 ORTHO05D008322 7.4e-12 75.1 198 47.5
Ciclev10009814m.g Citrus clementina HOM05D006794 ORTHO05D008322 1.4e-10 70.9 83 50.6
Peaxi162Scf00314g00315 Petunia axillaris HOM05D006794 ORTHO05D008322 6.9e-10 68.6 100 52.0
Nitab4.5_0010223g0030 Nicotiana tabacum HOM05D006794 ORTHO05D008322 2.0e-09 67.0 103 50.5
HPP92_008000 Vanilla planifolia HOM05D006794 ORTHO05D008322 2.9e-08 63.2 218 35.3
SalBow1G0629 Salvia bowleyana HOM05D006794 ORTHO05D008322 3.2e-07 59.7 198 43.9
Eucgr.J02057 Eucalyptus grandis HOM05D003527 ORTHO05D004099 4.2e-07 59.3 205 32.7
HanXRQChr05g0134511 Helianthus annuus HOM05D003527 ORTHO05D004099 9.3e-07 58.2 180 32.8
Haze_13383 Corylus avellana HOM05D006794 ORTHO05D008322 6.1e-06 55.5 84 48.8


User provided reference genes

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