Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p35540 Brassica napus HOM05D024929 ORTHO05D024489 3.5e-85 318.2 150 100.0
BraA01t03636Z Brassica rapa HOM05D024929 ORTHO05D024489 1.8e-81 305.8 150 96.0
BcaC09g48860 Brassica carinata HOM05D024929 ORTHO05D024489 1.4e-57 226.5 116 90.5
BolC1t04480H Brassica oleracea HOM05D024929 ORTHO05D024489 5.4e-54 214.5 104 95.2
C01p45090 Brassica napus HOM05D024929 ORTHO05D024489 3.5e-53 211.8 104 94.2
BcaB07g30933 Brassica carinata HOM05D000083 ORTHO05D009678 1.5e-24 116.7 248 36.7
BcaB07g30934 Brassica carinata HOM05D000083 ORTHO05D009678 3.4e-24 115.5 250 36.8
Sp2g09540 Schrenkiella parvula HOM05D000083 ORTHO05D009678 2.2e-23 112.8 96 61.5
BcaB07g30493 Brassica carinata HOM05D000083 ORTHO05D009678 2.7e-21 105.9 90 65.6
BcaB07g30935 Brassica carinata HOM05D000083 ORTHO05D009678 1.8e-20 103.2 248 34.7
BcaC04g21822 Brassica carinata HOM05D000083 ORTHO05D009678 2.3e-20 102.8 251 34.7
A09p21260 Brassica napus HOM05D000083 ORTHO05D009678 2.3e-20 102.8 250 33.6
C09p27050 Brassica napus HOM05D000083 ORTHO05D009678 2.3e-20 102.8 251 34.7
BolC9t55588H Brassica oleracea HOM05D000083 ORTHO05D009678 2.3e-20 102.8 251 34.7
BcaC03g16692 Brassica carinata HOM05D000083 ORTHO05D009678 6.7e-20 101.3 89 61.8
C02p45320 Brassica napus HOM05D000083 ORTHO05D009678 6.7e-20 101.3 89 61.8
BcaB07g30495 Brassica carinata HOM05D000083 ORTHO05D009678 3.3e-19 99.0 90 62.2
A02p28600 Brassica napus HOM05D000083 ORTHO05D009678 4.3e-19 98.6 89 61.8
BraA09t37731Z Brassica rapa HOM05D000083 ORTHO05D009678 4.3e-19 98.6 250 32.8
A02p28560 Brassica napus HOM05D000083 ORTHO05D009678 7.4e-19 97.8 89 61.8
BraA02t07897Z Brassica rapa HOM05D000083 ORTHO05D009678 7.4e-19 97.8 89 61.8
BcaB07g30931 Brassica carinata HOM05D000083 ORTHO05D009678 9.7e-19 97.4 205 36.1
BraA02t07893Z Brassica rapa HOM05D000083 ORTHO05D009678 1.3e-18 97.1 89 61.8
A09p21250 Brassica napus HOM05D000083 ORTHO05D009678 1.6e-18 96.7 252 33.7
BraA09t37730Z Brassica rapa HOM05D000083 ORTHO05D009678 1.6e-18 96.7 252 33.7
BcaB07g30498 Brassica carinata HOM05D000083 ORTHO05D009678 2.8e-18 95.9 90 60.0
BcaB07g30500 Brassica carinata HOM05D000083 ORTHO05D009678 2.8e-18 95.9 90 60.0
BcaB07g30494 Brassica carinata HOM05D000083 ORTHO05D009678 4.8e-18 95.1 90 61.1
BcaB07g30497 Brassica carinata HOM05D000083 ORTHO05D009678 4.8e-18 95.1 90 61.1
BcaB07g30936 Brassica carinata HOM05D000083 ORTHO05D009678 5.3e-17 91.7 235 33.6
Thhalv10029430m.g Eutrema salsugineum HOM05D000083 ORTHO05D009678 9.0e-17 90.9 248 29.4
BcaB07g30499 Brassica carinata HOM05D000083 ORTHO05D009678 4.5e-16 88.6 90 58.9
BcaB07g30492 Brassica carinata HOM05D000083 ORTHO05D009678 1.3e-15 87.0 90 55.6
Thhalv10029514m.g Eutrema salsugineum HOM05D000083 ORTHO05D009678 8.5e-15 84.3 96 51.0
C07p27660 Brassica napus HOM05D000083 ORTHO05D009678 6.1e-13 78.2 196 30.6
BraA06t27569Z Brassica rapa HOM05D000083 ORTHO05D009678 6.1e-13 78.2 195 30.8
A06p46980 Brassica napus HOM05D000083 ORTHO05D009678 1.4e-12 77.0 195 30.8
C07p27680 Brassica napus HOM05D000083 ORTHO05D009678 1.4e-12 77.0 196 30.6
BraA06t27570Z Brassica rapa HOM05D000083 ORTHO05D009678 1.4e-12 77.0 195 30.8
BcaC06g34523 Brassica carinata HOM05D000083 ORTHO05D009678 1.8e-12 76.6 195 30.3
BolC7t43290H Brassica oleracea HOM05D000083 ORTHO05D009678 1.8e-12 76.6 195 30.3
C07p27630 Brassica napus HOM05D000083 ORTHO05D009678 3.0e-12 75.9 195 30.8
BcaC06g34518 Brassica carinata HOM05D000083 ORTHO05D009678 3.9e-12 75.5 196 30.1
BolC7t43295H Brassica oleracea HOM05D000083 ORTHO05D009678 3.9e-12 75.5 196 30.1
BcaC06g34517 Brassica carinata HOM05D000083 ORTHO05D009678 5.1e-12 75.1 196 30.1
C07p27640 Brassica napus HOM05D000083 ORTHO05D009678 5.1e-12 75.1 196 30.1
BcaC06g34512 Brassica carinata HOM05D000083 ORTHO05D009678 6.7e-12 74.7 196 30.1
BolC7t43296H Brassica oleracea HOM05D000083 ORTHO05D009678 1.1e-11 73.9 196 30.1
BcaC06g34515 Brassica carinata HOM05D000083 ORTHO05D009678 1.5e-11 73.6 196 29.1
BolC7t43298H Brassica oleracea HOM05D000083 ORTHO05D009678 1.9e-11 73.2 197 31.0
BcaB07g30932 Brassica carinata HOM05D000083 ORTHO05D009678 4.3e-11 72.0 191 30.9
BolC7t43299H Brassica oleracea HOM05D000083 ORTHO05D009678 4.3e-11 72.0 195 29.7
C02p45660 Brassica napus HOM05D030109 ORTHO05D033667 9.7e-11 70.9 71 62.0
AL3G14810 Arabidopsis lyrata HOM05D000083 ORTHO05D009678 4.8e-10 68.6 84 50.0
BcaC06g34514 Brassica carinata HOM05D000083 ORTHO05D009678 1.1e-09 67.4 38 81.6
BcaC06g31590 Brassica carinata HOM05D000083 ORTHO05D009678 4.1e-09 65.5 38 78.9
Carub.0003s0387 Capsella rubella HOM05D000083 ORTHO05D009678 3.4e-08 62.4 64 51.6
Carub.0002s0413 Capsella rubella HOM05D000083 ORTHO05D009678 1.7e-07 60.1 78 47.4
A06p46960 Brassica napus HOM05D000083 ORTHO05D009678 3.8e-07 58.9 29 82.8
A06p46970 Brassica napus HOM05D000083 ORTHO05D009678 3.8e-07 58.9 29 82.8
C07p27570 Brassica napus HOM05D000083 ORTHO05D009678 1.9e-06 56.6 29 79.3
BolC7t43297H Brassica oleracea HOM05D000083 ORTHO05D009678 5.5e-06 55.1 29 75.9


User provided reference genes

Program Settings