Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p35130 Brassica napus HOM05D006153 ORTHO05D007701 8.9e-62 240.0 111 100.0
BraA01t03595Z Brassica rapa HOM05D006153 ORTHO05D007701 8.9e-62 240.0 111 100.0
BcaC09g48920 Brassica carinata HOM05D006153 ORTHO05D007701 1.2e-58 229.6 111 96.4
C01p44580 Brassica napus HOM05D006153 ORTHO05D007701 1.2e-58 229.6 111 96.4
BolC1t04422H Brassica oleracea HOM05D006153 ORTHO05D007701 4.6e-58 227.6 111 95.5
BcaB04g20696 Brassica carinata HOM05D006153 ORTHO05D007701 9.2e-51 203.4 111 83.8
Sp3g17600 Schrenkiella parvula HOM05D006153 ORTHO05D007701 7.8e-50 200.3 112 84.8
BcaC05g28465 Brassica carinata HOM05D006153 ORTHO05D007701 1.3e-49 199.5 111 83.8
C05p45510 Brassica napus HOM05D006153 ORTHO05D007701 3.9e-49 198.0 111 82.9
BolC5t33274H Brassica oleracea HOM05D006153 ORTHO05D007701 3.9e-49 198.0 111 82.9
BraA01t03596Z Brassica rapa HOM05D006153 ORTHO05D007701 6.6e-49 197.2 111 82.9
A05p30090 Brassica napus HOM05D006153 ORTHO05D007701 8.7e-49 196.8 111 82.9
BraA05t21849Z Brassica rapa HOM05D006153 ORTHO05D007701 8.7e-49 196.8 111 82.9
Thhalv10021914m.g Eutrema salsugineum HOM05D006153 ORTHO05D007701 1.5e-48 196.1 114 83.3
BcaB06g26014 Brassica carinata HOM05D006153 ORTHO05D007701 3.3e-48 194.9 111 80.2
BcaB04g20697 Brassica carinata HOM05D006153 ORTHO05D007701 9.0e-46 186.8 111 78.4
CARHR094970 Cardamine hirsuta HOM05D006153 ORTHO05D007701 5.4e-43 177.6 113 77.9
A01p35140 Brassica napus HOM05D006153 ORTHO05D007701 9.3e-43 176.8 97 82.5
AT3G19550 Arabidopsis thaliana HOM05D006153 ORTHO05D007701 1.6e-42 176.0 110 77.3
Carub.0003s1938 Capsella rubella HOM05D006153 ORTHO05D007701 5.3e-38 161.0 109 74.3
Thhalv10021904m.g Eutrema salsugineum HOM05D006153 ORTHO05D007701 5.8e-29 131.0 67 86.6
AL3G32960 Arabidopsis lyrata HOM05D006153 ORTHO05D007701 4.2e-27 124.8 76 76.3
Manes.07G064400 Manihot esculenta HOM05D006153 ORTHO05D007701 4.9e-20 101.3 113 46.0
GSVIVG01037871001 Vitis vinifera HOM05D006153 ORTHO05D007701 7.1e-19 97.4 105 47.6
CSS0010428 Camellia sinensis var. sinensis HOM05D006153 ORTHO05D007701 1.6e-18 96.3 104 47.1
GSVIVG01037872001 Vitis vinifera HOM05D006153 ORTHO05D007701 3.5e-18 95.1 105 46.7
Actinidia34374 Actinidia chinensis HOM05D006153 ORTHO05D007701 4.6e-18 94.7 110 46.4
Cpa.g.sc200.7 Carica papaya HOM05D006153 ORTHO05D007701 1.3e-17 93.2 104 46.2
Dinv42217 Davidia involucrata HOM05D006153 ORTHO05D007701 1.3e-17 93.2 104 47.1
Aa31LG8G6290 Aethionema arabicum HOM05D006153 ORTHO05D007701 1.8e-17 92.8 85 56.5
GSVIVG01037873001 Vitis vinifera HOM05D006153 ORTHO05D007701 6.7e-17 90.9 105 45.7
Duzib132G0541 Durio zibethinus HOM05D006153 ORTHO05D007701 1.5e-16 89.7 110 45.5
Sabra16G0186000 Salix brachista HOM05D006153 ORTHO05D007701 1.5e-16 89.7 107 43.0
Gohir.A01G008400 Gossypium hirsutum HOM05D006153 ORTHO05D007701 3.3e-16 88.6 115 40.9
Potri.001G296900 Populus trichocarpa HOM05D006153 ORTHO05D007701 4.3e-16 88.2 75 52.0
PGR042G3678 Punica granatum HOM05D006153 ORTHO05D007701 5.7e-16 87.8 110 43.6
MD10G1102200 Malus domestica HOM05D006153 ORTHO05D007701 7.4e-16 87.4 118 48.3
Thecc.02G113400 Theobroma cacao HOM05D006153 ORTHO05D007701 1.3e-15 86.7 112 42.9
Gorai.002G009800 Gossypium raimondii HOM05D006153 ORTHO05D007701 1.6e-15 86.3 115 40.0
Nitab4.5_0001105g0220 Nicotiana tabacum HOM05D006153 ORTHO05D007701 1.6e-15 86.3 60 61.7
Nitab4.5_0004685g0060 Nicotiana tabacum HOM05D006153 ORTHO05D007701 1.6e-15 86.3 60 61.7
Peaxi162Scf00016g00267 Petunia axillaris HOM05D006153 ORTHO05D007701 2.2e-15 85.9 48 70.8
Migut.I00275 Erythranthe guttata HOM05D006153 ORTHO05D007701 2.8e-15 85.5 45 75.6
Gohir.D13G044400 Gossypium hirsutum HOM05D006153 ORTHO05D007701 2.8e-15 85.5 107 42.1
Gorai.013G049200 Gossypium raimondii HOM05D006153 ORTHO05D007701 2.8e-15 85.5 107 42.1
Sabra09G0070400 Salix brachista HOM05D006153 ORTHO05D007701 2.8e-15 85.5 99 46.5
CiPaw.05G015200 Carya illinoinensis HOM05D006153 ORTHO05D007701 3.7e-15 85.1 103 43.7
COL.COLO4_32545 Corchorus olitorius HOM05D006153 ORTHO05D007701 3.7e-15 85.1 109 43.1
Duzib052G0610 Durio zibethinus HOM05D006153 ORTHO05D007701 3.7e-15 85.1 110 39.1
MD05G1096000 Malus domestica HOM05D006153 ORTHO05D007701 3.7e-15 85.1 120 45.8
Potri.009G091100 Populus trichocarpa HOM05D006153 ORTHO05D007701 3.7e-15 85.1 104 45.2
Sc14g0002580 Simmondsia chinensis HOM05D006153 ORTHO05D007701 3.7e-15 85.1 104 45.2
arahy.Tifrunner.gnm1.ann1.EHR7LK Arachis hypogaea HOM05D006153 ORTHO05D007701 4.8e-15 84.7 110 46.4
Dinv15786 Davidia involucrata HOM05D006153 ORTHO05D007701 4.8e-15 84.7 108 46.3
Lalb_Chr06g0165291 Lupinus albus HOM05D006153 ORTHO05D007701 4.8e-15 84.7 103 46.6
Manes.10G074900 Manihot esculenta HOM05D006153 ORTHO05D007701 6.3e-15 84.3 110 41.8
Oeu013772.1 Olea europaea HOM05D006153 ORTHO05D007701 1.4e-14 83.2 95 40.0
Eucgr.G00438 Eucalyptus grandis HOM05D006153 ORTHO05D007701 1.8e-14 82.8 56 62.5
QL11p031990 Quercus lobata HOM05D006153 ORTHO05D007701 1.8e-14 82.8 95 42.1
Actinidia27982 Actinidia chinensis HOM05D006153 ORTHO05D007701 2.4e-14 82.4 93 45.2
Prupe.8G140400 Prunus persica HOM05D006153 ORTHO05D007701 2.4e-14 82.4 104 44.2
Solyc01g107280.3 Solanum lycopersicum HOM05D006153 ORTHO05D007701 3.1e-14 82.0 49 69.4
Sopen01g049530 Solanum pennellii HOM05D006153 ORTHO05D007701 3.1e-14 82.0 49 69.4
Lalb_Chr02g0145121 Lupinus albus HOM05D006153 ORTHO05D007701 9.0e-14 80.5 104 44.2
Rhsim05G0089900 Rhododendron simsii HOM05D006153 ORTHO05D007701 9.0e-14 80.5 57 63.2
TAR381G0917 Trochodendron aralioides HOM05D006153 ORTHO05D007701 9.0e-14 80.5 108 38.9
FAN15G1936 Fragaria x ananassa HOM05D006153 ORTHO05D007701 1.5e-13 79.7 107 43.9
PSO541G5112 Papaver somniferum HOM05D006153 ORTHO05D007701 3.4e-13 78.6 104 38.5
PGSC0003DMG400025850 Solanum tuberosum HOM05D006153 ORTHO05D007701 3.4e-13 78.6 65 52.3
Haze_10254 Corylus avellana HOM05D006153 ORTHO05D007701 4.5e-13 78.2 59 64.4
Peaxi162Scf00003g00261 Petunia axillaris HOM05D006153 ORTHO05D007701 4.5e-13 78.2 48 62.5
Phvul.007G043000 Phaseolus vulgaris HOM05D006153 ORTHO05D007701 4.5e-13 78.2 106 43.4
FAN20G1027 Fragaria x ananassa HOM05D006153 ORTHO05D007701 5.9e-13 77.8 107 42.1
QL11p029270 Quercus lobata HOM05D006153 ORTHO05D007701 7.6e-13 77.4 52 65.4
VMungo0720G0345 Vigna mungo HOM05D006153 ORTHO05D007701 1.0e-12 77.0 102 42.2
FAN24G1230 Fragaria x ananassa HOM05D006153 ORTHO05D007701 1.3e-12 76.6 107 43.0
Glyma.20G131700 Glycine max HOM05D006153 ORTHO05D007701 1.3e-12 76.6 102 41.2
TWI23G0900 Tripterygium wilfordii HOM05D006153 ORTHO05D007701 1.3e-12 76.6 46 73.9
DCAR_001679 Daucus carota HOM05D006153 ORTHO05D007701 1.7e-12 76.3 78 46.2
Lj5g0020623 Lotus japonicus HOM05D006153 ORTHO05D007701 1.7e-12 76.3 104 41.3
Lj5g0024415 Lotus japonicus HOM05D006153 ORTHO05D007701 1.7e-12 76.3 102 42.2
Haze_10299 Corylus avellana HOM05D006153 ORTHO05D007701 2.9e-12 75.5 46 65.2
FvH4_2g04480 Fragaria vesca HOM05D006153 ORTHO05D007701 2.9e-12 75.5 107 42.1
Peaxi162Scf00152g00320 Petunia axillaris HOM05D006153 ORTHO05D007701 6.5e-12 74.3 70 51.4
FAN27G0726 Fragaria x ananassa HOM05D006153 ORTHO05D007701 8.5e-12 73.9 107 41.1
Nn5g30510 Nelumbo nucifera HOM05D006153 ORTHO05D007701 1.4e-11 73.2 50 58.0
CANSAT25G0942 Cannabis sativa HOM05D006153 ORTHO05D007701 1.9e-11 72.8 47 66.0
Nitab4.5_0002017g0030 Nicotiana tabacum HOM05D006153 ORTHO05D007701 1.9e-11 72.8 51 58.8
Nitab4.5_0012681g0010 Nicotiana tabacum HOM05D006153 ORTHO05D007701 1.9e-11 72.8 45 62.2
RcHm_v2.0_Chr6g0253971 Rosa chinensis HOM05D006153 ORTHO05D007701 1.9e-11 72.8 106 41.5
Glyma.10G259200 Glycine max HOM05D006153 ORTHO05D007701 2.5e-11 72.4 107 39.3
Cfa004655 Carpinus fangiana HOM05D006153 ORTHO05D007701 7.2e-11 70.9 47 70.2
Ciclev10029838m.g Citrus clementina HOM05D006153 ORTHO05D007701 7.2e-11 70.9 115 40.0
MBI16_g15146_MAGBIO Magnolia biondii HOM05D006153 ORTHO05D007701 7.2e-11 70.9 102 38.2
Lj1g0020403 Lotus japonicus HOM05D006153 ORTHO05D007701 9.4e-11 70.5 104 39.4
Cfa004694 Carpinus fangiana HOM05D006153 ORTHO05D007701 1.2e-10 70.1 111 41.4
DCAR_001674 Daucus carota HOM05D006153 ORTHO05D007701 1.2e-10 70.1 50 56.0
Hund06709 Selenicereus undatus HOM05D006153 ORTHO05D007701 1.6e-10 69.7 48 62.5
DCAR_003609 Daucus carota HOM05D006153 ORTHO05D007701 2.1e-10 69.3 50 60.0
AUR62031329 Chenopodium quinoa HOM05D006153 ORTHO05D007701 2.7e-10 68.9 65 47.7
Hma1.2p1_1174F.1_g263880 Hydrangea macrophylla HOM05D006153 ORTHO05D007701 2.7e-10 68.9 103 36.9
Sed0025917 Sechium edule HOM05D006153 ORTHO05D007701 2.7e-10 68.9 46 63.0
ATR0030G019 Amborella trichopoda HOM05D006153 ORTHO05D007701 3.6e-10 68.6 44 56.8
Haze_10289 Corylus avellana HOM05D006153 ORTHO05D007701 3.6e-10 68.6 101 37.6
AUR62027357 Chenopodium quinoa HOM05D006153 ORTHO05D007701 4.6e-10 68.2 49 55.1
HanXRQChr16g0514451 Helianthus annuus HOM05D006153 ORTHO05D007701 4.6e-10 68.2 49 59.2
EL10Ac8g19360 Beta vulgaris HOM05D006153 ORTHO05D007701 6.1e-10 67.8 68 47.1
ClCG02G006680 Citrullus lanatus HOM05D006153 ORTHO05D007701 6.1e-10 67.8 93 39.8
HanXRQChr16g0514901 Helianthus annuus HOM05D006153 ORTHO05D007701 6.1e-10 67.8 107 39.3
SGA_v2.0_scaffold624G53237 Striga asiatica HOM05D006153 ORTHO05D007701 6.1e-10 67.8 42 66.7
CsaV3_7G007950 Cucumis sativus L. HOM05D006153 ORTHO05D007701 1.8e-09 66.2 46 58.7
Aqoxy6G02752 Aquilegia oxysepala HOM05D006153 ORTHO05D007701 3.0e-09 65.5 46 58.7
HanXRQChr16g0514921 Helianthus annuus HOM05D006153 ORTHO05D007701 3.0e-09 65.5 57 49.1
MELO3C018509.2 Cucumis melo HOM05D006153 ORTHO05D007701 5.1e-09 64.7 42 61.9
HanXRQChr16g0514461 Helianthus annuus HOM05D006153 ORTHO05D007701 5.1e-09 64.7 107 38.3
Lsat_1_v5_gn_5_114460 Lactuca sativa HOM05D006153 ORTHO05D007701 6.7e-09 64.3 112 33.9
Eucgr.G01281 Eucalyptus grandis HOM05D006153 ORTHO05D007701 8.8e-09 63.9 41 65.9
Os12g0507700 Oryza sativa ssp. japonica HOM05D006153 ORTHO05D007701 8.8e-09 63.9 86 39.5
Zm00001eb264740 Zea mays HOM05D006153 ORTHO05D007701 5.7e-08 61.2 94 35.1
ECA234G4313 Erigeron canadensis HOM05D006153 ORTHO05D007701 7.4e-08 60.8 98 34.7
HanXRQChr13g0425861 Helianthus annuus HOM05D006153 ORTHO05D007701 1.7e-07 59.7 39 59.0
Ca_24350_v3 Cicer arietinum L. HOM05D006153 ORTHO05D007701 6.3e-07 57.8 74 37.8
Medtr5g005180 Medicago truncatula HOM05D006153 ORTHO05D007701 6.3e-07 57.8 37 62.2
Zm00001eb138020 Zea mays HOM05D006153 ORTHO05D007701 6.3e-07 57.8 36 61.1
Cpa.g.sc2471.1 Carica papaya HOM05D008232 ORTHO05D010390 1.4e-06 56.6 44 56.8
ECA234G3366 Erigeron canadensis HOM05D006153 ORTHO05D007701 1.8e-06 56.2 42 52.4
Psat4g228040 Pisum sativum HOM05D006153 ORTHO05D007701 1.8e-06 56.2 37 62.2


User provided reference genes

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