Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p34940 Brassica napus HOM05D007631 ORTHO05D009566 4.9e-126 454.5 236 100.0
BraA01t03577Z Brassica rapa HOM05D007631 ORTHO05D009566 4.9e-126 454.5 236 100.0
C01p44350 Brassica napus HOM05D007631 ORTHO05D009566 7.8e-124 447.2 236 98.3
BolC1t04400H Brassica oleracea HOM05D007631 ORTHO05D009566 7.8e-124 447.2 236 98.3
Sp3g17810 Schrenkiella parvula HOM05D007631 ORTHO05D009566 4.8e-113 411.4 234 88.9
Thhalv10021444m.g Eutrema salsugineum HOM05D007631 ORTHO05D009566 2.4e-112 409.1 236 88.1
AL3G33250 Arabidopsis lyrata HOM05D007631 ORTHO05D009566 1.1e-101 373.6 229 82.1
AT3G19800 Arabidopsis thaliana HOM05D007631 ORTHO05D009566 4.6e-100 368.2 228 80.7
CARHR095310 Cardamine hirsuta HOM05D007631 ORTHO05D009566 8.7e-99 364.0 233 80.7
Carub.0003s1968 Capsella rubella HOM05D007631 ORTHO05D009566 2.8e-97 359.0 233 79.0
Aa31LG8G6570 Aethionema arabicum HOM05D007631 ORTHO05D009566 3.4e-95 352.1 234 77.4
Manes.04G066700 Manihot esculenta HOM05D007631 ORTHO05D009566 1.1e-66 257.3 184 66.3
Gohir.A03G110300 Gossypium hirsutum HOM05D007631 ORTHO05D009566 5.3e-64 248.4 221 56.1
Gohir.D02G134900 Gossypium hirsutum HOM05D007631 ORTHO05D009566 1.2e-63 247.3 201 60.2
CiPaw.09G164100 Carya illinoinensis HOM05D007631 ORTHO05D009566 1.5e-63 246.9 180 65.0
Duzib268G1119 Durio zibethinus HOM05D007631 ORTHO05D009566 1.7e-62 243.4 175 64.0
Ciclev10032529m.g Citrus clementina HOM05D007631 ORTHO05D009566 2.2e-62 243.0 186 63.4
Potri.005G094700 Populus trichocarpa HOM05D007631 ORTHO05D009566 2.7e-60 236.1 182 62.6
TWI53G1419 Tripterygium wilfordii HOM05D007631 ORTHO05D009566 3.0e-59 232.6 178 62.9
Eucgr.J00853 Eucalyptus grandis HOM05D007631 ORTHO05D009566 3.3e-58 229.2 182 59.9
ECA246G0740 Erigeron canadensis HOM05D007631 ORTHO05D009566 2.8e-57 226.1 176 60.2
Glyma.11G102300 Glycine max HOM05D007631 ORTHO05D009566 8.2e-57 224.6 183 60.1
CsaV3_3G031500 Cucumis sativus L. HOM05D007631 ORTHO05D009566 1.4e-56 223.8 181 58.6
AUR62015208 Chenopodium quinoa HOM05D007631 ORTHO05D009566 1.8e-56 223.4 179 57.5
CsaV3_3G032520 Cucumis sativus L. HOM05D007631 ORTHO05D009566 1.8e-56 223.4 181 58.0
PGR119G1778 Punica granatum HOM05D007631 ORTHO05D009566 1.8e-56 223.4 190 56.3
Nn4g24939 Nelumbo nucifera HOM05D007631 ORTHO05D009566 2.4e-56 223.0 180 60.0
MELO3C024033.2 Cucumis melo HOM05D007631 ORTHO05D009566 5.3e-56 221.9 183 58.5
Cc11_g05090 Coffea canephora HOM05D007631 ORTHO05D009566 2.6e-55 219.5 183 57.9
PSO478G5292 Papaver somniferum HOM05D007631 ORTHO05D009566 3.5e-55 219.2 185 57.3
EL10Ac9g22926 Beta vulgaris HOM05D007631 ORTHO05D009566 5.9e-55 218.4 180 56.1
Lsat_1_v5_gn_3_33601 Lactuca sativa HOM05D007631 ORTHO05D009566 5.9e-55 218.4 176 59.1
SalBow6G3201 Salvia bowleyana HOM05D007631 ORTHO05D009566 7.7e-55 218.0 178 59.6
ClCG10G011860 Citrullus lanatus HOM05D007631 ORTHO05D009566 2.9e-54 216.1 202 54.0
CAN.G157.15 Capsicum annuum HOM05D007631 ORTHO05D009566 8.5e-54 214.5 183 56.8
Lj3g0001232 Lotus japonicus HOM05D007631 ORTHO05D009566 1.1e-53 214.2 183 58.5
CANSAT64G0359 Cannabis sativa HOM05D007631 ORTHO05D009566 1.9e-53 213.4 185 56.8
Lalb_Chr03g0024841 Lupinus albus HOM05D007631 ORTHO05D009566 4.2e-53 212.2 183 58.5
Hma1.2p1_0499F.1_g166830 Hydrangea macrophylla HOM05D007631 ORTHO05D009566 9.4e-53 211.1 180 56.1
Sopen02g009160 Solanum pennellii HOM05D007631 ORTHO05D009566 2.1e-52 209.9 183 55.7
VMungo1127G1566 Vigna mungo HOM05D007631 ORTHO05D009566 2.1e-52 209.9 182 56.6
Solyc02g055440.4 Solanum lycopersicum HOM05D007631 ORTHO05D009566 4.7e-52 208.8 183 54.6
Medtr4g074590 Medicago truncatula HOM05D007631 ORTHO05D009566 1.8e-51 206.8 183 57.4
PGSC0003DMG400029978 Solanum tuberosum HOM05D007631 ORTHO05D009566 3.0e-51 206.1 181 55.8
PSO017G5087 Papaver somniferum HOM05D007631 ORTHO05D009566 2.0e-50 203.4 165 58.2
MD16G1250700 Malus domestica HOM05D007631 ORTHO05D009566 2.6e-50 203.0 183 55.2
GSVIVG01010153001 Vitis vinifera HOM05D007631 ORTHO05D009566 9.8e-50 201.1 180 56.1
HanXRQChr17g0540801 Helianthus annuus HOM05D007631 ORTHO05D009566 1.3e-49 200.7 150 62.0
TPR.G32328 Trifolium pratense HOM05D007631 ORTHO05D009566 1.7e-49 200.3 186 56.5
FAN12G2650 Fragaria x ananassa HOM05D007631 ORTHO05D009566 2.8e-49 199.5 198 53.5
COL.COLO4_27670 Corchorus olitorius HOM05D007631 ORTHO05D009566 4.1e-48 195.7 224 48.2
unitig_699.g19551 Utricularia gibba HOM05D007631 ORTHO05D009566 5.4e-48 195.3 181 51.9
Ca_03026_v3 Cicer arietinum L. HOM05D007631 ORTHO05D009566 3.8e-46 189.1 185 54.6
FAN07G2143 Fragaria x ananassa HOM05D007631 ORTHO05D009566 5.0e-46 188.7 207 50.7
arahy.Tifrunner.gnm1.ann1.C4PR70 Arachis hypogaea HOM05D007631 ORTHO05D009566 2.5e-45 186.4 209 48.8
Nitab4.5_0002392g0040 Nicotiana tabacum HOM05D007631 ORTHO05D009566 9.4e-45 184.5 219 45.2
Dinv17601 Davidia involucrata HOM05D007631 ORTHO05D009566 1.8e-43 180.3 178 52.8
Hund24286 Selenicereus undatus HOM05D007631 ORTHO05D009566 8.3e-41 171.4 140 56.4
vmacro10901 Vaccinium macrocarpon HOM05D007631 ORTHO05D009566 1.4e-40 170.6 133 57.1
Phvul.011G031300 Phaseolus vulgaris HOM05D007631 ORTHO05D009566 2.4e-40 169.9 185 49.2
HPP92_025628 Vanilla planifolia HOM05D007631 ORTHO05D009566 9.1e-40 167.9 200 45.5
Sed0008358 Sechium edule HOM05D007631 ORTHO05D009566 5.9e-39 165.2 176 47.7
FAN17G2236 Fragaria x ananassa HOM05D007631 ORTHO05D009566 7.7e-39 164.9 157 54.8
Sc10g0006760 Simmondsia chinensis HOM05D007631 ORTHO05D009566 1.0e-38 164.5 140 55.7
Psat7g173560 Pisum sativum HOM05D007631 ORTHO05D009566 1.1e-37 161.0 143 56.6
SGA_v2.0_scaffold88G27232 Striga asiatica HOM05D007631 ORTHO05D009566 5.6e-37 158.7 127 59.8
Oeu033537.1 Olea europaea HOM05D007631 ORTHO05D009566 2.1e-36 156.8 139 56.8
Os04g0525000 Oryza sativa ssp. japonica HOM05D007631 ORTHO05D009566 3.6e-36 156.0 160 48.1
QL03p043760 Quercus lobata HOM05D007631 ORTHO05D009566 8.9e-35 151.4 111 60.4
DCAR_030399 Daucus carota HOM05D007631 ORTHO05D009566 2.9e-33 146.4 208 41.8
Zm00001eb076870 Zea mays HOM05D007631 ORTHO05D009566 2.9e-33 146.4 200 41.5
Gorai.005G150800 Gossypium raimondii HOM05D007631 ORTHO05D009566 4.9e-33 145.6 159 47.8
Cpa.g.sc63.2 Carica papaya HOM05D007631 ORTHO05D009566 6.4e-33 145.2 116 56.9
Thecc.02G311600 Theobroma cacao HOM05D007631 ORTHO05D009566 1.1e-32 144.4 137 52.6
Haze_20362 Corylus avellana HOM05D007631 ORTHO05D009566 1.4e-32 144.1 197 44.7
ATR0618G124 Amborella trichopoda HOM05D007631 ORTHO05D009566 5.4e-32 142.1 131 54.2
Prupe.1G077300 Prunus persica HOM05D007631 ORTHO05D009566 1.0e-30 137.9 166 42.8
FvH4_4g07430 Fragaria vesca HOM05D007631 ORTHO05D009566 2.3e-30 136.7 122 54.1
CDE05G3190 Ceratophyllum demersum HOM05D005588 ORTHO05D006615 1.1e-29 134.4 159 44.0
RcHm_v2.0_Chr4g0399891 Rosa chinensis HOM05D007631 ORTHO05D009566 1.1e-29 134.4 120 56.7
Atru.chr11.1322 Acer truncatum HOM05D007631 ORTHO05D009566 9.5e-29 131.3 109 61.5
Peaxi162Scf00363g00724 Petunia axillaris HOM05D007631 ORTHO05D009566 1.0e-27 127.9 95 62.1
MBI06_g36505_MAGBIO Magnolia biondii HOM05D007631 ORTHO05D009566 1.3e-25 120.9 142 46.5
Aqoxy7G02010 Aquilegia oxysepala HOM05D007631 ORTHO05D009566 2.7e-23 113.2 145 45.5
Atru.BG.289.p Acer truncatum HOM05D007631 ORTHO05D009566 5.6e-21 105.5 90 57.8
Pp3c1_30620 Physcomitrium patens HOM05D007631 ORTHO05D009566 2.1e-20 103.6 188 34.0
Cfa019889 Carpinus fangiana HOM05D007631 ORTHO05D009566 1.1e-19 101.3 79 60.8
AagrBONN_evm.TU.Sc2ySwM_228.2165 Anthoceros agrestis HOM05D007631 ORTHO05D009566 3.1e-19 99.8 188 33.0
TAR622G1133 Trochodendron aralioides HOM05D007631 ORTHO05D009566 5.2e-19 99.0 86 53.5
FAN22G0357 Fragaria x ananassa HOM05D007631 ORTHO05D009566 7.5e-18 95.1 90 52.2
Migut.E00703 Erythranthe guttata HOM05D007631 ORTHO05D009566 4.6e-15 85.9 137 38.0
Migut.E00614 Erythranthe guttata HOM05D007631 ORTHO05D009566 6.0e-15 85.5 81 54.3
CSS0013150 Camellia sinensis var. sinensis HOM05D007631 ORTHO05D009566 8.9e-11 71.6 57 61.4
Nitab4.5_0000139g0130 Nicotiana tabacum HOM05D007631 ORTHO05D009566 5.8e-10 68.9 181 26.5
arahy.Tifrunner.gnm1.ann1.GZ47R7 Arachis hypogaea HOM05D007631 ORTHO05D009566 4.6e-07 59.3 56 44.6


User provided reference genes

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