Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p34850 Brassica napus HOM05D007059 ORTHO05D009155 5.1e-117 424.5 222 100.0
BraA01t03568Z Brassica rapa HOM05D007059 ORTHO05D009155 5.1e-117 424.5 222 100.0
BcaC09g48947 Brassica carinata HOM05D007059 ORTHO05D009155 8.4e-112 407.1 222 90.5
C01p44250 Brassica napus HOM05D007059 ORTHO05D009155 8.4e-112 407.1 222 90.5
BolC1t04385H Brassica oleracea HOM05D007059 ORTHO05D009155 8.4e-112 407.1 222 90.5
Sp3g17910 Schrenkiella parvula HOM05D007059 ORTHO05D009155 1.2e-105 386.7 225 86.7
AL3G33460 Arabidopsis lyrata HOM05D007059 ORTHO05D009155 1.9e-103 379.4 225 84.9
Thhalv10021482m.g Eutrema salsugineum HOM05D007059 ORTHO05D009155 5.5e-103 377.9 225 84.9
CARHR095430 Cardamine hirsuta HOM05D007059 ORTHO05D009155 4.6e-102 374.8 225 84.4
Carub.0003s1980 Capsella rubella HOM05D007059 ORTHO05D009155 3.0e-101 372.1 225 84.4
Aa31LG8G6740 Aethionema arabicum HOM05D007059 ORTHO05D009155 2.8e-83 312.4 287 61.7
Rhsim04G0168700 Rhododendron simsii HOM05D007059 ORTHO05D009155 8.3e-67 257.7 230 63.5
Prupe.1G344600 Prunus persica HOM05D007059 ORTHO05D009155 2.4e-66 256.1 231 61.5
RcHm_v2.0_Chr4g0446371 Rosa chinensis HOM05D007059 ORTHO05D009155 7.0e-66 254.6 227 63.4
CiPaw.05G167400 Carya illinoinensis HOM05D007059 ORTHO05D009155 9.1e-66 254.2 232 61.2
vmacro08590 Vaccinium macrocarpon HOM05D007059 ORTHO05D009155 2.0e-65 253.1 230 61.3
THA.LOC104801903 Tarenaya hassleriana HOM05D007059 ORTHO05D009155 1.7e-64 250.0 229 63.8
Nn4g24915 Nelumbo nucifera HOM05D007059 ORTHO05D009155 2.9e-64 249.2 159 77.4
FvH4_4g36660 Fragaria vesca HOM05D007059 ORTHO05D009155 3.8e-64 248.8 227 62.6
FAN12G0665 Fragaria x ananassa HOM05D007059 ORTHO05D009155 3.8e-64 248.8 227 62.6
TAR629G1440 Trochodendron aralioides HOM05D007059 ORTHO05D009155 3.8e-64 248.8 197 67.5
GSVIVG01010187001 Vitis vinifera HOM05D007059 ORTHO05D009155 3.8e-64 248.8 194 67.5
Thecc.02G295400 Theobroma cacao HOM05D007059 ORTHO05D009155 5.0e-64 248.4 234 61.5
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 6.5e-64 248.1 230 60.0
MD16G1006000 Malus domestica HOM05D007059 ORTHO05D009155 8.5e-64 247.7 227 60.4
Atru.chr11.1222 Acer truncatum HOM05D007059 ORTHO05D009155 1.1e-63 247.3 229 60.3
Aqoxy3G04246 Aquilegia oxysepala HOM05D007059 ORTHO05D009155 1.1e-63 247.3 199 68.3
FAN07G2854 Fragaria x ananassa HOM05D007059 ORTHO05D009155 2.5e-63 246.1 227 62.1
Potri.010G169700 Populus trichocarpa HOM05D007059 ORTHO05D009155 3.2e-63 245.7 235 59.6
Sabra10G0129500 Salix brachista HOM05D007059 ORTHO05D009155 4.2e-63 245.4 235 59.1
Lj3A851T65 Lonicera japonica HOM05D007059 ORTHO05D009155 1.2e-62 243.8 223 61.9
CSS0038027 Camellia sinensis var. sinensis HOM05D007059 ORTHO05D009155 1.6e-62 243.4 237 59.9
MBI06_g22349_MAGBIO Magnolia biondii HOM05D007059 ORTHO05D009155 1.6e-62 243.4 227 59.9
Ciclev10033522m.g Citrus clementina HOM05D007059 ORTHO05D009155 2.1e-62 243.0 161 76.4
Eucgr.G02016 Eucalyptus grandis HOM05D007059 ORTHO05D009155 3.6e-62 242.3 231 58.0
Lj3g0001367 Lotus japonicus HOM05D007059 ORTHO05D009155 8.0e-62 241.1 157 75.2
COL.COLO4_16620 Corchorus olitorius HOM05D007059 ORTHO05D009155 1.0e-61 240.7 232 60.8
ECA234G4546 Erigeron canadensis HOM05D007059 ORTHO05D009155 1.4e-61 240.4 198 64.6
CAN.G624.23 Capsicum annuum HOM05D007059 ORTHO05D009155 2.3e-61 239.6 218 60.1
Peaxi162Scf01172g00004 Petunia axillaris HOM05D007059 ORTHO05D009155 3.0e-61 239.2 177 68.4
AUR62012864 Chenopodium quinoa HOM05D007059 ORTHO05D009155 4.0e-61 238.8 227 58.1
unitig_27.g25281 Utricularia gibba HOM05D007059 ORTHO05D009155 6.8e-61 238.0 124 90.3
Ca_03042_v3 Cicer arietinum L. HOM05D007059 ORTHO05D009155 1.2e-60 237.3 224 59.8
Nitab4.5_0007261g0020 Nicotiana tabacum HOM05D007059 ORTHO05D009155 1.2e-60 237.3 172 68.6
TPR.G21564 Trifolium pratense HOM05D007059 ORTHO05D009155 1.2e-60 237.3 160 74.4
CANSAT35G1437 Cannabis sativa HOM05D007059 ORTHO05D009155 1.5e-60 236.9 125 91.2
Actinidia38411 Actinidia chinensis HOM05D007059 ORTHO05D009155 2.0e-60 236.5 173 72.3
AUR62017646 Chenopodium quinoa HOM05D007059 ORTHO05D009155 2.0e-60 236.5 227 57.7
ClCG11G001160 Citrullus lanatus HOM05D007059 ORTHO05D009155 2.0e-60 236.5 230 56.5
Sopen04g004490 Solanum pennellii HOM05D007059 ORTHO05D009155 2.0e-60 236.5 219 58.0
Gohir.A01G145900 Gossypium hirsutum HOM05D007059 ORTHO05D009155 2.6e-60 236.1 125 90.4
Gohir.D01G138500 Gossypium hirsutum HOM05D007059 ORTHO05D009155 2.6e-60 236.1 125 90.4
Gorai.002G167400 Gossypium raimondii HOM05D007059 ORTHO05D009155 2.6e-60 236.1 125 90.4
Psat7g174240 Pisum sativum HOM05D007059 ORTHO05D009155 2.6e-60 236.1 171 70.8
Manes.16G044801 Manihot esculenta HOM05D007059 ORTHO05D009155 4.4e-60 235.3 230 58.7
PSO782G1004 Papaver somniferum HOM05D007059 ORTHO05D009155 4.4e-60 235.3 228 58.3
Medtr4g074210 Medicago truncatula HOM05D007059 ORTHO05D009155 5.7e-60 235.0 224 56.7
Glyma.11G104100 Glycine max HOM05D007059 ORTHO05D009155 7.5e-60 234.6 170 69.4
Nitab4.5_0002113g0150 Nicotiana tabacum HOM05D007059 ORTHO05D009155 7.5e-60 234.6 165 70.3
PSO063G1277 Papaver somniferum HOM05D007059 ORTHO05D009155 7.5e-60 234.6 228 59.2
Solyc04g009370.4 Solanum lycopersicum HOM05D007059 ORTHO05D009155 9.8e-60 234.2 219 57.5
Lalb_Chr01g0001591 Lupinus albus HOM05D007059 ORTHO05D009155 1.3e-59 233.8 226 57.1
PGSC0003DMG400032539 Solanum tuberosum HOM05D007059 ORTHO05D009155 1.3e-59 233.8 165 71.5
MELO3C020030.2 Cucumis melo HOM05D007059 ORTHO05D009155 2.2e-59 233.0 173 66.5
MSTRG.2053 Avicennia marina HOM05D007059 ORTHO05D009155 3.7e-59 232.3 125 87.2
Sc10g0008670 Simmondsia chinensis HOM05D007059 ORTHO05D009155 3.7e-59 232.3 155 74.2
HanXRQChr01g0028541 Helianthus annuus HOM05D007059 ORTHO05D009155 8.3e-59 231.1 193 68.4
Phvul.011G032300 Phaseolus vulgaris HOM05D007059 ORTHO05D009155 8.3e-59 231.1 165 72.1
VMungo1127G1389 Vigna mungo HOM05D007059 ORTHO05D009155 1.8e-58 229.9 153 75.8
Glyma.12G029100 Glycine max HOM05D007059 ORTHO05D009155 2.4e-58 229.6 170 68.2
Lsat_1_v5_gn_4_26421 Lactuca sativa HOM05D007059 ORTHO05D009155 3.1e-58 229.2 198 67.2
EL10Ac9g22903 Beta vulgaris HOM05D007059 ORTHO05D009155 7.0e-58 228.0 227 58.1
ATR0124G031 Amborella trichopoda HOM05D007059 ORTHO05D009155 1.6e-57 226.9 125 84.0
AT3G19900 Arabidopsis thaliana HOM05D007059 ORTHO05D009155 1.6e-57 226.9 158 75.9
Migut.E00704 Erythranthe guttata HOM05D007059 ORTHO05D009155 4.5e-57 225.3 155 72.3
Zm00001eb259420 Zea mays HOM05D007059 ORTHO05D009155 1.0e-56 224.2 127 84.3
Cc11_g00200 Coffea canephora HOM05D007059 ORTHO05D009155 1.7e-56 223.4 127 84.3
Sed0015909 Sechium edule HOM05D007059 ORTHO05D009155 2.9e-56 222.6 229 54.1
HPP92_002491 Vanilla planifolia HOM05D007059 ORTHO05D009155 5.0e-56 221.9 197 62.4
HPP92_002544 Vanilla planifolia HOM05D007059 ORTHO05D009155 5.0e-56 221.9 195 62.6
arahy.Tifrunner.gnm1.ann1.NRJ0Q8 Arachis hypogaea HOM05D007059 ORTHO05D009155 3.3e-55 219.2 153 71.9
arahy.Tifrunner.gnm1.ann1.PC0HA4 Arachis hypogaea HOM05D007059 ORTHO05D009155 3.3e-55 219.2 153 71.9
Haze_11738 Corylus avellana HOM05D007059 ORTHO05D009155 2.0e-52 209.9 209 57.9
TWI77G0260 Tripterygium wilfordii HOM05D007059 ORTHO05D009155 2.0e-52 209.9 174 66.1
Pp3c2_14430 Physcomitrium patens HOM05D007059 ORTHO05D009155 2.9e-51 206.1 127 76.4
Cpa.g.sc298.2 Carica papaya HOM05D007059 ORTHO05D009155 4.9e-51 205.3 212 58.5
AagrBONN_evm.TU.Sc2ySwM_344.1288 Anthoceros agrestis HOM05D007059 ORTHO05D009155 7.0e-50 201.4 124 75.0
SMO114G0039 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 1.2e-49 200.7 125 75.2
Hund08500 Selenicereus undatus HOM05D007059 ORTHO05D009155 1.6e-49 200.3 152 69.1
Oeu027905.1 Olea europaea HOM05D007059 ORTHO05D009155 2.0e-49 199.9 150 67.3
Pp3c10_16080 Physcomitrium patens HOM05D007059 ORTHO05D009155 3.5e-49 199.1 127 74.8
Duzib251G0490 Durio zibethinus HOM05D007059 ORTHO05D009155 1.0e-48 197.6 225 52.9
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 8.6e-48 194.5 142 76.8
Mapoly0055s0010 Marchantia polymorpha HOM05D007059 ORTHO05D009155 1.1e-47 194.1 125 72.8
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 1.6e-46 190.3 134 70.1
Migut.E00613 Erythranthe guttata HOM05D007059 ORTHO05D009155 1.8e-45 186.8 137 68.6
CBR_g48375 Chara braunii HOM05D007059 ORTHO05D009155 2.6e-36 156.4 122 59.0
Actinidia13703 Actinidia chinensis HOM05D007059 ORTHO05D009155 4.4e-36 155.6 168 54.2
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 6.6e-32 141.7 115 67.0
Dinv01917 Davidia involucrata HOM05D007059 ORTHO05D009155 6.6e-32 141.7 229 43.7
PGR031G0357 Punica granatum HOM05D007059 ORTHO05D009155 4.4e-28 129.0 158 47.5
BolC5t33201H Brassica oleracea HOM05D007059 ORTHO05D009155 1.0e-24 117.9 84 75.0
CsaV3_5G013210 Cucumis sativus L. HOM05D007059 ORTHO05D009155 2.3e-24 116.7 122 51.6
Actinidia14379 Actinidia chinensis HOM05D007059 ORTHO05D009155 1.6e-22 110.5 56 91.1
SEGI_27177 Sequoiadendron giganteum HOM05D007059 ORTHO05D009155 1.7e-19 100.5 58 81.0
Cre01.g007050 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D009155 1.6e-17 94.0 115 43.5
SMO364G0884 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 1.5e-15 87.4 65 66.2
Cre03.g197850 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D034487 4.0e-13 79.3 113 35.4
BraA05t21808Z Brassica rapa HOM05D007059 ORTHO05D040342 5.8e-12 75.5 45 84.4
A05p29230 Brassica napus HOM05D007059 ORTHO05D040342 4.9e-11 72.4 45 82.2
MCO14G049 Micromonas commoda HOM05D007059 ORTHO05D009155 3.5e-09 66.2 102 34.3


User provided reference genes

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