Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p33350 Brassica napus HOM05D001921 ORTHO05D001784 2.0e-71 272.3 139 100.0
BraA01t03453Z Brassica rapa HOM05D001921 ORTHO05D001784 2.0e-71 272.3 139 100.0
C01p42590 Brassica napus HOM05D001921 ORTHO05D001784 1.3e-70 269.6 139 99.3
BolC1t04216H Brassica oleracea HOM05D001921 ORTHO05D001784 1.3e-70 269.6 139 99.3
BcaC09g49094 Brassica carinata HOM05D001921 ORTHO05D001784 1.1e-69 266.5 139 98.6
BcaB04g20578 Brassica carinata HOM05D001921 ORTHO05D001784 2.6e-66 255.4 139 93.5
Sp3g19600 Schrenkiella parvula HOM05D001921 ORTHO05D001784 5.7e-58 227.6 142 85.2
AL3G35680 Arabidopsis lyrata HOM05D001921 ORTHO05D001784 5.9e-55 217.6 139 82.0
AT3G21570 Arabidopsis thaliana HOM05D001921 ORTHO05D001784 3.8e-54 214.9 139 79.9
CARHR097520 Cardamine hirsuta HOM05D001921 ORTHO05D001784 1.8e-51 206.1 143 78.3
Carub.0003s2161 Capsella rubella HOM05D001921 ORTHO05D001784 2.6e-50 202.2 141 77.3
Aa31LG8G8240 Aethionema arabicum HOM05D001921 ORTHO05D001784 1.8e-43 179.5 151 69.5
THA.LOC104820224 Tarenaya hassleriana HOM05D001921 ORTHO05D001784 7.3e-29 131.0 159 56.0
Cpa.g.sc16.79 Carica papaya HOM05D001921 ORTHO05D001784 1.3e-17 93.6 210 36.2
VMungo0540G1436 Vigna mungo HOM05D001921 ORTHO05D001784 6.4e-17 91.3 180 40.6
Sed0022941 Sechium edule HOM05D001921 ORTHO05D001784 1.9e-16 89.7 171 39.2
Haze_01021 Corylus avellana HOM05D001921 ORTHO05D001784 2.4e-16 89.4 206 38.3
CiPaw.02G088800 Carya illinoinensis HOM05D001921 ORTHO05D001784 3.2e-16 89.0 206 37.9
Lalb_Chr12g0196391 Lupinus albus HOM05D001921 ORTHO05D001784 4.2e-16 88.6 151 38.4
arahy.Tifrunner.gnm1.ann1.288BMH Arachis hypogaea HOM05D001921 ORTHO05D001784 1.6e-15 86.7 203 35.0
arahy.Tifrunner.gnm1.ann1.XA6I97 Arachis hypogaea HOM05D001921 ORTHO05D001784 2.1e-15 86.3 203 35.0
Cfa015526 Carpinus fangiana HOM05D001921 ORTHO05D001784 2.7e-15 85.9 204 37.7
Phvul.006G158900 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 3.5e-15 85.5 180 37.8
Atru.chr4.2710 Acer truncatum HOM05D001921 ORTHO05D001784 4.6e-15 85.1 190 40.0
ClCG06G005610 Citrullus lanatus HOM05D001921 ORTHO05D001784 7.8e-15 84.3 200 36.0
CiPaw.01G156200 Carya illinoinensis HOM05D001921 ORTHO05D001784 1.7e-14 83.2 204 35.8
Hma1.2p1_0511F.1_g169240 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 1.7e-14 83.2 181 38.7
Ca_00585_v3 Cicer arietinum L. HOM05D001921 ORTHO05D001784 2.3e-14 82.8 196 32.1
Nitab4.5_0000059g0260 Nicotiana tabacum HOM05D001921 ORTHO05D001784 2.3e-14 82.8 186 35.5
CsaV3_6G005540 Cucumis sativus L. HOM05D001921 ORTHO05D001784 3.0e-14 82.4 204 36.3
RcHm_v2.0_Chr4g0420321 Rosa chinensis HOM05D001921 ORTHO05D001784 3.0e-14 82.4 175 41.1
Hma1.2p1_0643F.1_g194540 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 3.9e-14 82.0 207 34.8
Sed0007577 Sechium edule HOM05D001921 ORTHO05D001784 5.1e-14 81.6 199 35.2
PGR004G0777 Punica granatum HOM05D001921 ORTHO05D001784 6.6e-14 81.3 194 35.6
Gohir.D10G163601 Gossypium hirsutum HOM05D001921 ORTHO05D001784 8.7e-14 80.9 200 35.5
Gorai.011G182400 Gossypium raimondii HOM05D001921 ORTHO05D001784 8.7e-14 80.9 200 35.5
QL06p006408 Quercus lobata HOM05D001921 ORTHO05D001784 8.7e-14 80.9 209 34.4
Nitab4.5_0003070g0060 Nicotiana tabacum HOM05D001921 ORTHO05D001784 1.1e-13 80.5 181 35.9
Lj6g0003156 Lotus japonicus HOM05D001921 ORTHO05D001784 1.5e-13 80.1 188 35.6
Lj6g0019677 Lotus japonicus HOM05D001921 ORTHO05D001784 1.5e-13 80.1 188 35.6
Rhsim02G0016000 Rhododendron simsii HOM05D001921 ORTHO05D001784 1.5e-13 80.1 211 32.7
Thecc.04G273300 Theobroma cacao HOM05D001921 ORTHO05D001784 1.5e-13 80.1 201 36.8
FAN22G2319 Fragaria x ananassa HOM05D001921 ORTHO05D001784 1.9e-13 79.7 179 36.9
Glyma.17G021000 Glycine max HOM05D001921 ORTHO05D001784 2.5e-13 79.3 164 38.4
Gohir.A10G105100 Gossypium hirsutum HOM05D001921 ORTHO05D001784 2.5e-13 79.3 200 35.0
Medtr2g020830 Medicago truncatula HOM05D001921 ORTHO05D001784 2.5e-13 79.3 195 32.3
PGR031G1199 Punica granatum HOM05D001921 ORTHO05D001784 2.5e-13 79.3 187 35.3
MELO3C021383.2 Cucumis melo HOM05D001921 ORTHO05D001784 3.3e-13 79.0 204 34.8
FAN17G2860 Fragaria x ananassa HOM05D001921 ORTHO05D001784 5.6e-13 78.2 184 37.0
Glyma.07G253400 Glycine max HOM05D001921 ORTHO05D001784 9.6e-13 77.4 165 37.0
Glyma.13G212500 Glycine max HOM05D001921 ORTHO05D001784 9.6e-13 77.4 188 36.7
Duzib151G0850 Durio zibethinus HOM05D001921 ORTHO05D001784 1.3e-12 77.0 200 36.0
FvH4_4g16740 Fragaria vesca HOM05D001921 ORTHO05D001784 1.6e-12 76.6 180 37.8
FAN12G2234 Fragaria x ananassa HOM05D001921 ORTHO05D001784 1.6e-12 76.6 180 37.8
FAN12G3386 Fragaria x ananassa HOM05D001921 ORTHO05D001784 1.6e-12 76.6 180 37.8
Prupe.1G145900 Prunus persica HOM05D001921 ORTHO05D001784 1.6e-12 76.6 185 37.3
Glyma.15G100300 Glycine max HOM05D001921 ORTHO05D001784 2.8e-12 75.9 181 36.5
Phvul.003G098700 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 2.8e-12 75.9 175 34.9
Lalb_Chr15g0087151 Lupinus albus HOM05D001921 ORTHO05D001784 3.6e-12 75.5 188 35.6
CANSAT78G1722 Cannabis sativa HOM05D001921 ORTHO05D001784 4.8e-12 75.1 204 35.3
CAN.G889.1 Capsicum annuum HOM05D001921 ORTHO05D001784 8.1e-12 74.3 213 30.5
Eucgr.H03650 Eucalyptus grandis HOM05D001921 ORTHO05D001784 8.1e-12 74.3 164 39.6
PGSC0003DMG400032113 Solanum tuberosum HOM05D001921 ORTHO05D001784 8.1e-12 74.3 213 32.4
Nitab4.5_0009936g0010 Nicotiana tabacum HOM05D001921 ORTHO05D001784 1.1e-11 73.9 169 39.1
Duzib212G0985 Durio zibethinus HOM05D001921 ORTHO05D001784 1.8e-11 73.2 198 35.9
Manes.03G188600 Manihot esculenta HOM05D001921 ORTHO05D001784 2.4e-11 72.8 214 32.7
TAR636G3386 Trochodendron aralioides HOM05D001921 ORTHO05D001784 2.4e-11 72.8 181 32.6
DCAR_023282 Daucus carota HOM05D001921 ORTHO05D001784 3.1e-11 72.4 184 37.5
Sopen01g032320 Solanum pennellii HOM05D001921 ORTHO05D001784 3.1e-11 72.4 213 31.5
PGSC0003DMG400030765 Solanum tuberosum HOM05D001921 ORTHO05D001784 3.1e-11 72.4 187 32.6
FAN07G0769 Fragaria x ananassa HOM05D001921 ORTHO05D001784 4.0e-11 72.0 181 34.3
Gohir.D09G059900 Gossypium hirsutum HOM05D001921 ORTHO05D001784 4.0e-11 72.0 204 33.8
Solyc01g080500.2 Solanum lycopersicum HOM05D001921 ORTHO05D001784 4.0e-11 72.0 214 31.3
Ciclev10005894m.g Citrus clementina HOM05D001921 ORTHO05D001784 5.3e-11 71.6 216 31.9
Gohir.A09G060900 Gossypium hirsutum HOM05D001921 ORTHO05D001784 5.3e-11 71.6 204 33.8
Lalb_Chr18g0055871 Lupinus albus HOM05D001921 ORTHO05D001784 5.3e-11 71.6 182 34.6
Gorai.006G074600 Gossypium raimondii HOM05D001921 ORTHO05D001784 6.9e-11 71.2 204 33.8
Manes.15G019800 Manihot esculenta HOM05D001921 ORTHO05D001784 6.9e-11 71.2 214 34.1
Sabra10G0013000 Salix brachista HOM05D001921 ORTHO05D001784 6.9e-11 71.2 205 34.6
Sabra08G0162400 Salix brachista HOM05D001921 ORTHO05D001784 9.0e-11 70.9 226 33.6
Actinidia00069 Actinidia chinensis HOM05D001921 ORTHO05D001784 1.2e-10 70.5 191 33.5
Lj4g0019196 Lotus japonicus HOM05D001921 ORTHO05D001784 1.2e-10 70.5 177 34.5
Nitab4.5_0002295g0070 Nicotiana tabacum HOM05D001921 ORTHO05D001784 1.2e-10 70.5 169 36.7
MBI19_g25275_MAGBIO Magnolia biondii HOM05D001921 ORTHO05D001784 1.5e-10 70.1 151 35.1
Peaxi162Scf00769g00001 Petunia axillaris HOM05D001921 ORTHO05D001784 2.0e-10 69.7 162 35.2
Psat4g028640 Pisum sativum HOM05D001921 ORTHO05D001784 2.0e-10 69.7 160 37.5
Sc15g0003760 Simmondsia chinensis HOM05D001921 ORTHO05D001784 2.0e-10 69.7 141 39.0
TAR362G1200 Trochodendron aralioides HOM05D001921 ORTHO05D001784 2.6e-10 69.3 186 34.9
Aqoxy5G00575 Aquilegia oxysepala HOM05D001921 ORTHO05D001784 3.4e-10 68.9 162 34.6
TPR.G18029 Trifolium pratense HOM05D001921 ORTHO05D001784 3.4e-10 68.9 209 29.2
Oeu022233.1 Olea europaea HOM05D001921 ORTHO05D001784 4.4e-10 68.6 204 31.9
DCAR_030578 Daucus carota HOM05D001921 ORTHO05D001784 5.8e-10 68.2 177 34.5
Medtr4g118490 Medicago truncatula HOM05D001921 ORTHO05D001784 7.6e-10 67.8 137 37.2
TPR.G28126 Trifolium pratense HOM05D001921 ORTHO05D001784 9.9e-10 67.4 171 35.7
Oeu032694.1 Olea europaea HOM05D001921 ORTHO05D001784 4.9e-09 65.1 206 32.5
VMungo1215G1281 Vigna mungo HOM05D001921 ORTHO05D001784 4.9e-09 65.1 174 35.1
DCAR_027127 Daucus carota HOM05D001921 ORTHO05D001784 8.4e-09 64.3 147 38.8
Solyc06g054470.1 Solanum lycopersicum HOM05D001921 ORTHO05D001784 1.4e-08 63.5 187 31.0
TAR365G0872 Trochodendron aralioides HOM05D001921 ORTHO05D001784 1.4e-08 63.5 189 30.7
Oeu037657.1 Olea europaea HOM05D001921 ORTHO05D001784 1.9e-08 63.2 208 28.8
Peaxi162Scf00095g00034 Petunia axillaris HOM05D001921 ORTHO05D001784 1.9e-08 63.2 177 31.6
Potri.010G027500 Populus trichocarpa HOM05D001921 ORTHO05D001784 2.4e-08 62.8 52 67.3
SGA_v2.0_scaffold57G20294 Striga asiatica HOM05D001921 ORTHO05D001784 2.4e-08 62.8 207 32.9
MBI18_g10965_MAGBIO Magnolia biondii HOM05D001921 ORTHO05D001784 3.2e-08 62.4 185 31.9
Potri.008G198000 Populus trichocarpa HOM05D001921 ORTHO05D001784 3.2e-08 62.4 225 32.4
ATR0580G129 Amborella trichopoda HOM05D001921 ORTHO05D001784 4.2e-08 62.0 194 32.0
Sopen06g019540 Solanum pennellii HOM05D001921 ORTHO05D001784 7.1e-08 61.2 187 30.5
SGA_v2.0_scaffold142G35647 Striga asiatica HOM05D001921 ORTHO05D001784 9.3e-08 60.8 216 31.0
HPP92_025281 Vanilla planifolia HOM05D001921 ORTHO05D001784 9.3e-08 60.8 171 34.5
Cfa017851 Carpinus fangiana HOM05D001921 ORTHO05D001784 1.6e-07 60.1 54 63.0
SGA_v2.0_scaffold89G27578 Striga asiatica HOM05D001921 ORTHO05D001784 1.6e-07 60.1 184 32.1
CAN.G256.2 Capsicum annuum HOM05D001921 ORTHO05D001784 2.7e-07 59.3 198 30.8
Ca_21561_v3 Cicer arietinum L. HOM05D001921 ORTHO05D001784 3.5e-07 58.9 166 33.1
MD03G1009700 Malus domestica HOM05D001921 ORTHO05D001784 3.5e-07 58.9 83 51.8
Os01g0384800 Oryza sativa ssp. japonica HOM05D001921 ORTHO05D001784 4.6e-07 58.5 146 38.4
Cc03_g02690 Coffea canephora HOM05D001921 ORTHO05D001784 7.9e-07 57.8 98 39.8
CDE11G0807 Ceratophyllum demersum HOM05D001921 ORTHO05D001784 1.3e-06 57.0 180 31.1
Cfa010136 Carpinus fangiana HOM05D001921 ORTHO05D001784 2.3e-06 56.2 54 63.0
Psat1g185920 Pisum sativum HOM05D001921 ORTHO05D001784 5.1e-06 55.1 160 30.0
Rhsim02G0206800 Rhododendron simsii HOM05D001921 ORTHO05D001784 5.1e-06 55.1 158 31.6
MSTRG.3970 Avicennia marina HOM05D001921 ORTHO05D001784 6.6e-06 54.7 59 50.8


User provided reference genes

Program Settings