Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p32750 Brassica napus HOM05D003348 ORTHO05D010016 5.5e-136 487.6 248 100.0
BraA05t21730Z Brassica rapa HOM05D003348 ORTHO05D010016 3.1e-115 418.7 248 89.1
C09p43770 Brassica napus HOM05D003348 ORTHO05D010016 2.0e-109 399.4 212 95.8
C04p13150 Brassica napus HOM05D003348 ORTHO05D010016 5.7e-109 397.9 212 95.3
BolC9t57261H Brassica oleracea HOM05D003348 ORTHO05D010016 6.3e-108 394.4 212 94.8
BolC6t38448H Brassica oleracea HOM05D003348 ORTHO05D010016 2.0e-98 362.8 212 88.7
A02p04450 Brassica napus HOM05D003348 ORTHO05D010016 1.9e-96 356.3 205 90.2
BcaB07g33116 Brassica carinata HOM05D003348 ORTHO05D010016 1.2e-87 327.0 214 77.6
BcaC02g11615 Brassica carinata HOM05D003348 ORTHO05D010016 1.2e-87 327.0 174 95.4
BcaC01g00111 Brassica carinata HOM05D003348 ORTHO05D010016 1.4e-86 323.6 211 82.0
BcaC04g20417 Brassica carinata HOM05D003348 ORTHO05D010016 6.8e-86 321.2 174 94.3
BcaC03g16941 Brassica carinata HOM05D003348 ORTHO05D010016 7.3e-80 301.2 200 78.5
BcaC07g37267 Brassica carinata HOM05D003348 ORTHO05D010016 5.2e-78 295.0 201 78.1
BraA03t15649Z Brassica rapa HOM05D003348 ORTHO05D010016 5.8e-77 291.6 174 87.9
BolC1t02733H Brassica oleracea HOM05D003348 ORTHO05D010016 3.7e-76 288.9 201 76.1
C05p18920 Brassica napus HOM05D003348 ORTHO05D010016 4.9e-76 288.5 167 88.6
BcaB06g26670 Brassica carinata HOM05D003348 ORTHO05D010016 6.0e-74 281.6 211 70.1
C07p04070 Brassica napus HOM05D003348 ORTHO05D010016 3.9e-73 278.9 222 71.2
C03p71560 Brassica napus HOM05D003348 ORTHO05D010016 5.1e-73 278.5 172 86.0
C07p09080 Brassica napus HOM05D003348 ORTHO05D010016 6.6e-73 278.1 203 72.4
BcaC06g36451 Brassica carinata HOM05D003348 ORTHO05D010016 8.6e-73 277.7 214 70.6
BcaB05g22915 Brassica carinata HOM05D003348 ORTHO05D010016 1.1e-72 277.3 176 77.8
BcaC06g36007 Brassica carinata HOM05D003348 ORTHO05D010016 1.9e-72 276.6 186 78.5
C06p29220 Brassica napus HOM05D003348 ORTHO05D010016 1.9e-72 276.6 211 73.5
BolC7t41316H Brassica oleracea HOM05D003348 ORTHO05D010016 2.5e-72 276.2 203 71.9
BcaC02g08685 Brassica carinata HOM05D003348 ORTHO05D010016 1.6e-71 273.5 185 74.6
BcaB01g01113 Brassica carinata HOM05D003348 ORTHO05D010016 1.8e-70 270.0 186 74.2
BcaC05g25941 Brassica carinata HOM05D003348 ORTHO05D010016 1.8e-70 270.0 189 76.7
BcaC05g28880 Brassica carinata HOM05D003348 ORTHO05D010016 1.5e-69 266.9 159 87.4
BcaB07g33152 Brassica carinata HOM05D003348 ORTHO05D010016 1.3e-68 263.8 208 66.3
BcaC04g20110 Brassica carinata HOM05D006890 ORTHO05D009907 5.6e-64 248.4 146 85.6
BcaC05g28875 Brassica carinata HOM05D003348 ORTHO05D010016 3.1e-62 242.7 137 89.8
BcaC03g16878 Brassica carinata HOM05D003348 ORTHO05D010016 4.0e-62 242.3 173 75.7
A03p65970 Brassica napus HOM05D003348 ORTHO05D010016 4.0e-62 242.3 211 64.5
BolC7t40801H Brassica oleracea HOM05D003348 ORTHO05D010016 4.0e-62 242.3 203 66.0
BolC8t46861H Brassica oleracea HOM05D003348 ORTHO05D010016 2.9e-60 236.1 255 57.3
BcaC05g27372 Brassica carinata HOM05D003348 ORTHO05D010016 3.2e-59 232.6 178 73.0
BcaB06g26643 Brassica carinata HOM05D003348 ORTHO05D010016 1.1e-56 224.2 146 76.7
BcaB03g16334 Brassica carinata HOM05D003348 ORTHO05D010016 3.3e-56 222.6 189 63.0
A10p18440 Brassica napus HOM05D003348 ORTHO05D010016 9.6e-56 221.1 150 78.7
BraA06t26263Z Brassica rapa HOM05D003348 ORTHO05D011028 2.4e-54 216.5 145 80.7
C01p28000 Brassica napus HOM05D003348 ORTHO05D010016 6.9e-54 214.9 201 61.2
BraA02t07591Z Brassica rapa HOM05D003348 ORTHO05D010016 4.4e-53 212.2 185 65.9
A03p49040 Brassica napus HOM05D003348 ORTHO05D010016 2.1e-50 203.4 151 73.5
A04p08260 Brassica napus HOM05D003348 ORTHO05D010016 2.1e-50 203.4 151 73.5
C09p24810 Brassica napus HOM05D003348 ORTHO05D010016 2.1e-50 203.4 173 65.9
C09p50420 Brassica napus HOM05D003348 ORTHO05D010016 3.3e-48 196.1 211 56.4
BcaB05g23930 Brassica carinata HOM05D003348 ORTHO05D010016 3.6e-47 192.6 123 75.6
BcaC02g10517 Brassica carinata HOM05D003348 ORTHO05D010016 8.1e-47 191.4 108 87.0
BcaB07g32279 Brassica carinata HOM05D003348 ORTHO05D010016 1.5e-45 187.2 172 59.9
BolC8t47537H Brassica oleracea HOM05D003348 ORTHO05D010016 2.9e-44 183.0 203 55.2
BolC9t57897H Brassica oleracea HOM05D003348 ORTHO05D010016 3.2e-43 179.5 211 53.1
BcaB04g19403 Brassica carinata HOM05D003348 ORTHO05D010016 1.8e-38 163.7 214 47.7
BcaC07g42527 Brassica carinata HOM05D003348 ORTHO05D009907 1.2e-34 151.0 109 67.0
A09p62230 Brassica napus HOM05D006890 ORTHO05D000421 1.6e-34 150.6 85 92.9
C03p32970 Brassica napus HOM05D003348 ORTHO05D010016 1.6e-34 150.6 85 92.9
BraA04t16864Z Brassica rapa HOM05D003348 ORTHO05D010016 1.1e-32 144.4 83 85.5
A04p10090 Brassica napus HOM05D003348 ORTHO05D010016 1.5e-32 144.1 83 85.5
BcaC08g45319 Brassica carinata HOM05D003348 ORTHO05D010016 9.6e-32 141.4 74 97.3
BcaC06g36529 Brassica carinata HOM05D003348 ORTHO05D010016 1.8e-30 137.1 76 94.7
BolC4t24341H Brassica oleracea HOM05D003348 ORTHO05D011028 2.4e-30 136.7 145 54.5
C02p47780 Brassica napus HOM05D003348 ORTHO05D010016 3.1e-30 136.3 76 92.1
BolC2t10813H Brassica oleracea HOM05D003348 ORTHO05D010016 3.1e-30 136.3 76 92.1
C09p44080 Brassica napus HOM05D003348 ORTHO05D010016 2.6e-29 133.3 76 89.5
BcaB03g16335 Brassica carinata HOM05D003348 ORTHO05D010016 4.2e-27 125.9 76 80.3
A09p59860 Brassica napus HOM05D003348 ORTHO05D011028 1.2e-26 124.4 110 62.7
C09p24820 Brassica napus HOM05D003348 ORTHO05D010016 1.8e-25 120.6 68 88.2
C09p44070 Brassica napus HOM05D003348 ORTHO05D010016 8.7e-25 118.2 68 86.8
BolC4t24342H Brassica oleracea HOM05D003348 ORTHO05D010016 5.3e-22 109.0 60 95.0
BcaC04g20095 Brassica carinata HOM05D006890 ORTHO05D000421 1.1e-19 101.3 87 60.9
A04p11990 Brassica napus HOM05D003348 ORTHO05D011028 2.5e-19 100.1 55 89.1
Aa31LG5G22030 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.4e-17 94.4 214 27.1
Aa31sc263G10 Aethionema arabicum HOM05D003348 ORTHO05D000395 9.7e-16 88.2 226 25.2
BraA09t38032Z Brassica rapa HOM05D003348 ORTHO05D010016 9.7e-16 88.2 84 59.5
BcaB07g33923 Brassica carinata HOM05D003348 ORTHO05D010016 1.3e-15 87.8 55 78.2
Aa31LG9G6060 Aethionema arabicum HOM05D003348 ORTHO05D000395 2.8e-15 86.7 196 25.5
BraA01t03402Z Brassica rapa HOM05D003348 ORTHO05D010016 4.1e-14 82.8 41 97.6
Aa31sc510G40 Aethionema arabicum HOM05D003348 ORTHO05D000395 9.1e-14 81.6 204 26.5
C04p27970 Brassica napus HOM05D003348 ORTHO05D011028 2.6e-13 80.1 77 55.8
C02p48450 Brassica napus HOM05D003348 ORTHO05D010016 1.0e-12 78.2 39 100.0
BolC2t10875H Brassica oleracea HOM05D003348 ORTHO05D010016 1.0e-12 78.2 39 100.0
Aa31LG2G17250 Aethionema arabicum HOM05D003348 ORTHO05D010016 6.5e-12 75.5 221 24.4
BolC4t25495H Brassica oleracea HOM05D000471 ORTHO05D000199 8.5e-12 75.1 205 28.3
BraA08t33333Z Brassica rapa HOM05D000471 ORTHO05D000199 1.9e-11 73.9 205 28.3
BolC8t47761H Brassica oleracea HOM05D000471 ORTHO05D000199 4.2e-11 72.8 225 26.7
Aa31sc411G20 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.2e-10 71.2 236 22.9
BraA03t15650Z Brassica rapa HOM05D003348 ORTHO05D010016 1.6e-10 70.9 37 89.2
C05p41480 Brassica napus HOM05D000471 ORTHO05D000199 4.7e-10 69.3 205 27.8
BolC5t32887H Brassica oleracea HOM05D000471 ORTHO05D000199 4.7e-10 69.3 205 27.8
Carub.0008s2148 Capsella rubella HOM05D000471 ORTHO05D000199 4.7e-10 69.3 226 24.8
SpUn0002_0500 Schrenkiella parvula HOM05D003348 ORTHO05D010016 2.3e-09 67.0 64 50.0
Aa31LG9G5280 Aethionema arabicum HOM05D003348 ORTHO05D010016 3.9e-09 66.2 113 33.6
BolC9t55313H Brassica oleracea HOM05D000471 ORTHO05D000199 8.8e-09 65.1 206 28.2
BolSC21t60244H Brassica oleracea HOM05D000471 ORTHO05D000199 2.0e-08 63.9 202 27.2
BcaC06g36215 Brassica carinata HOM05D000977 ORTHO05D001094 2.6e-08 63.5 161 27.3
BcaC02g10149 Brassica carinata HOM05D000977 ORTHO05D001094 3.3e-08 63.2 162 27.2
BolC2t10303H Brassica oleracea HOM05D000471 ORTHO05D000199 3.3e-08 63.2 212 27.4
BolC6t38086H Brassica oleracea HOM05D003348 ORTHO05D010016 5.7e-08 62.4 33 87.9
Thhalv10005449m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.7e-07 60.8 185 23.8
BolC2t10781H Brassica oleracea HOM05D000471 ORTHO05D000199 2.2e-07 60.5 194 27.8
Aa31sc214G40 Aethionema arabicum HOM05D003348 ORTHO05D000395 3.7e-07 59.7 173 25.4
BcaB08g35165 Brassica carinata HOM05D000471 ORTHO05D017506 4.8e-07 59.3 229 22.3
Thhalv10001218m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 8.2e-07 58.5 234 24.8
BcaB02g11153 Brassica carinata HOM05D000975 ORTHO05D003128 1.4e-06 57.8 213 24.4
Thhalv10023860m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.8e-06 57.4 204 23.5
Thhalv10023146m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.4e-06 57.0 230 23.5
C08p06960 Brassica napus HOM05D003348 ORTHO05D011028 3.1e-06 56.6 56 60.7
Thhalv10012293m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 3.1e-06 56.6 231 23.8
Aa31LG11G7530 Aethionema arabicum HOM05D000471 ORTHO05D000199 5.3e-06 55.8 206 24.8
Sp7g08630 Schrenkiella parvula HOM05D000471 ORTHO05D000199 5.3e-06 55.8 183 24.0
A01p33190 Brassica napus HOM05D000975 ORTHO05D003128 9.1e-06 55.1 214 22.4
C09p13190 Brassica napus HOM05D000975 ORTHO05D003128 9.1e-06 55.1 215 22.3
Thhalv10012192m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 9.1e-06 55.1 205 22.9
Thhalv10022967m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 9.1e-06 55.1 227 22.9


User provided reference genes

Program Settings