Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p32100 Brassica napus HOM05D000264 ORTHO05D000152 5.9e-35 150.2 70 100.0
BcaC09g49234 Brassica carinata HOM05D000264 ORTHO05D000152 8.2e-21 103.2 48 97.9
BolC1t05734H Brassica oleracea HOM05D000264 ORTHO05D000152 1.2e-16 89.4 49 83.7
BcaC09g47787 Brassica carinata HOM05D000264 ORTHO05D000152 3.6e-16 87.8 48 83.3
BcaB04g21356 Brassica carinata HOM05D000264 ORTHO05D000152 8.0e-16 86.7 48 83.3
Thhalv10020630m.g Eutrema salsugineum HOM05D000264 ORTHO05D000152 3.9e-15 84.3 47 80.9
A03p33710 Brassica napus HOM05D000264 ORTHO05D000152 5.7e-14 80.5 47 74.5
BraA03t12545Z Brassica rapa HOM05D000264 ORTHO05D000152 5.7e-14 80.5 47 74.5
BcaB04g19313 Brassica carinata HOM05D000264 ORTHO05D000152 1.3e-13 79.3 47 74.5
BcaC01g04362 Brassica carinata HOM05D000264 ORTHO05D000152 1.7e-13 79.0 47 72.3
C03p41010 Brassica napus HOM05D000264 ORTHO05D000152 1.7e-13 79.0 47 72.3
BolC3t16381H Brassica oleracea HOM05D000264 ORTHO05D000152 1.7e-13 79.0 47 72.3
BolC3t16390H Brassica oleracea HOM05D000264 ORTHO05D000152 1.7e-13 79.0 47 72.3
CARHR078810 Cardamine hirsuta HOM05D000264 ORTHO05D000152 2.2e-13 78.6 48 72.9
C03p40960 Brassica napus HOM05D000264 ORTHO05D000152 2.8e-13 78.2 47 72.3
CARHR078800 Cardamine hirsuta HOM05D000264 ORTHO05D000152 2.8e-13 78.2 46 76.1
BcaB04g21355 Brassica carinata HOM05D000264 ORTHO05D000152 8.2e-13 76.6 54 70.4
AL3G14640 Arabidopsis lyrata HOM05D000264 ORTHO05D000152 3.1e-12 74.7 48 70.8
Carub.0003s0376 Capsella rubella HOM05D000264 ORTHO05D000152 4.7e-08 60.8 48 60.4
THA.LOC104802840 Tarenaya hassleriana HOM05D000264 ORTHO05D000152 2.0e-06 55.5 46 52.2


User provided reference genes

Program Settings