Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p32030 Brassica napus HOM05D004230 ORTHO05D024011 1.3e-31 139.0 66 100.0
C01p41050 Brassica napus HOM05D004230 ORTHO05D024011 4.8e-23 110.5 66 83.3
BolC1t04060H Brassica oleracea HOM05D004230 ORTHO05D024011 4.8e-23 110.5 66 83.3
BcaC02g08607 Brassica carinata HOM05D004230 ORTHO05D018474 1.9e-19 98.6 65 72.3
BcaC09g49346 Brassica carinata HOM05D004230 ORTHO05D024011 2.7e-13 78.2 65 61.5
C04p52580 Brassica napus HOM05D004230 ORTHO05D007976 6.6e-12 73.6 62 56.5
BcaC06g34422 Brassica carinata HOM05D004230 ORTHO05D007976 1.5e-11 72.4 61 54.1
C01p22890 Brassica napus HOM05D004230 ORTHO05D007976 2.5e-11 71.6 62 54.8
C01p22970 Brassica napus HOM05D004230 ORTHO05D007976 2.5e-11 71.6 62 54.8
A06p45730 Brassica napus HOM05D004230 ORTHO05D007976 3.3e-11 71.2 65 52.3
BolC3t20706H Brassica oleracea HOM05D004230 ORTHO05D007976 3.3e-11 71.2 65 52.3
BraA06t26555Z Brassica rapa HOM05D004230 ORTHO05D007976 3.3e-11 71.2 65 52.3
A09p29770 Brassica napus HOM05D004230 ORTHO05D007976 4.3e-11 70.9 65 52.3
BcaC09g49286 Brassica carinata HOM05D004230 ORTHO05D007976 5.6e-11 70.5 62 54.8
C01p40550 Brassica napus HOM05D004230 ORTHO05D007976 5.6e-11 70.5 62 54.8
BolC4t28062H Brassica oleracea HOM05D004230 ORTHO05D007976 5.6e-11 70.5 62 54.8
BraA06t24715Z Brassica rapa HOM05D004230 ORTHO05D007976 5.6e-11 70.5 62 54.8
BcaC05g28003 Brassica carinata HOM05D004230 ORTHO05D007976 7.3e-11 70.1 65 50.8
C02p00010 Brassica napus HOM05D004230 ORTHO05D007976 7.3e-11 70.1 65 50.8
C05p40190 Brassica napus HOM05D004230 ORTHO05D007976 7.3e-11 70.1 65 50.8
BolC5t32761H Brassica oleracea HOM05D004230 ORTHO05D007976 7.3e-11 70.1 65 50.8
AL5G20550 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 9.5e-11 69.7 62 51.6
BcaC08g43996 Brassica carinata HOM05D004230 ORTHO05D007976 1.6e-10 68.9 62 53.2
BcaC09g52278 Brassica carinata HOM05D004230 ORTHO05D007976 1.6e-10 68.9 62 53.2
C01p22920 Brassica napus HOM05D004230 ORTHO05D007976 1.6e-10 68.9 65 52.3
BolC1t02226H Brassica oleracea HOM05D004230 ORTHO05D007976 1.6e-10 68.9 62 53.2
BcaC05g28343 Brassica carinata HOM05D004230 ORTHO05D007976 2.1e-10 68.6 62 51.6
BraA06t25864Z Brassica rapa HOM05D004230 ORTHO05D018474 4.7e-10 67.4 61 54.1
BcaB05g22709 Brassica carinata HOM05D004230 ORTHO05D007976 6.1e-10 67.0 65 49.2
BcaB05g23135 Brassica carinata HOM05D004230 ORTHO05D007976 1.0e-09 66.2 62 51.6
BolC3t17847H Brassica oleracea HOM05D004230 ORTHO05D007976 2.3e-09 65.1 62 53.2
SpUn0171_0010 Schrenkiella parvula HOM05D004230 ORTHO05D007976 3.1e-09 64.7 62 53.2
BcaC03g15070 Brassica carinata HOM05D004230 ORTHO05D007976 8.9e-09 63.2 62 51.6
BolC2t08696H Brassica oleracea HOM05D004230 ORTHO05D007976 8.9e-09 63.2 62 51.6
AL8G19300 Arabidopsis lyrata HOM05D004230 ORTHO05D000037 1.5e-08 62.4 62 46.8
AT1G35820 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 2.0e-08 62.0 62 46.8
AT1G43720 Arabidopsis thaliana HOM05D004230 ORTHO05D018474 2.0e-08 62.0 62 46.8
BcaC05g25838 Brassica carinata HOM05D004230 ORTHO05D007976 2.0e-08 62.0 62 51.6
BolC5t30511H Brassica oleracea HOM05D004230 ORTHO05D007976 2.0e-08 62.0 62 51.6
AL5G11160 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 2.6e-08 61.6 62 48.4
AT3G30520 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 9.8e-08 59.7 62 46.8
BcaC02g09042 Brassica carinata HOM05D004230 ORTHO05D007976 1.3e-07 59.3 62 48.4
Sp5g19020 Schrenkiella parvula HOM05D004230 ORTHO05D007976 1.3e-07 59.3 59 52.5
BcaB01g01083 Brassica carinata HOM05D004230 ORTHO05D007976 1.7e-07 58.9 61 44.3
C07p50550 Brassica napus HOM05D004230 ORTHO05D007976 1.7e-07 58.9 57 50.9
A03p38990 Brassica napus HOM05D004230 ORTHO05D007976 2.9e-07 58.2 63 50.8
A06p20520 Brassica napus HOM05D004230 ORTHO05D007976 2.9e-07 58.2 63 50.8
BolC3t18593H Brassica oleracea HOM05D004230 ORTHO05D018474 2.9e-07 58.2 40 67.5
BolC4t26781H Brassica oleracea HOM05D004230 ORTHO05D018474 2.9e-07 58.2 40 67.5
BraA03t13046Z Brassica rapa HOM05D004230 ORTHO05D007976 2.9e-07 58.2 63 50.8
BcaB07g32504 Brassica carinata HOM05D004230 ORTHO05D007976 4.9e-07 57.4 63 46.0
A03p63250 Brassica napus HOM05D004230 ORTHO05D007976 4.9e-07 57.4 62 50.0
BraA03t15403Z Brassica rapa HOM05D004230 ORTHO05D007976 4.9e-07 57.4 62 50.0
A06p33150 Brassica napus HOM05D004230 ORTHO05D007976 6.4e-07 57.0 57 49.1
Carub.0007s3045 Capsella rubella HOM05D004230 ORTHO05D007976 1.9e-06 55.5 62 48.4
A09p35300 Brassica napus HOM05D004230 ORTHO05D007976 2.4e-06 55.1 62 48.4
BraA09t39059Z Brassica rapa HOM05D004230 ORTHO05D007976 2.4e-06 55.1 62 48.4
Sp4g02630 Schrenkiella parvula HOM05D004230 ORTHO05D007976 2.4e-06 55.1 65 43.1
C05p15560 Brassica napus HOM05D004230 ORTHO05D018474 4.1e-06 54.3 40 65.0
C08p29240 Brassica napus HOM05D004230 ORTHO05D027608 4.1e-06 54.3 62 45.2
C07p53510 Brassica napus HOM05D004230 ORTHO05D027608 5.4e-06 53.9 62 45.2
BcaC07g36911 Brassica carinata HOM05D004230 ORTHO05D007976 7.0e-06 53.5 62 41.9
C01p36620 Brassica napus HOM05D004230 ORTHO05D007976 7.0e-06 53.5 62 45.2
C08p01070 Brassica napus HOM05D004230 ORTHO05D007976 7.0e-06 53.5 62 41.9
BolC1t03622H Brassica oleracea HOM05D004230 ORTHO05D007976 7.0e-06 53.5 62 45.2


User provided reference genes

Program Settings