Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p31880 Brassica napus HOM05D023307 ORTHO05D015251 1.7e-131 472.6 235 100.0
C01p40770 Brassica napus HOM05D023307 ORTHO05D015251 1.1e-93 347.1 180 95.6
BraA01t03314Z Brassica rapa HOM05D023307 ORTHO05D015251 6.7e-75 284.6 171 86.0
BcaC09g49260 Brassica carinata HOM05D023307 ORTHO05D015251 5.7e-50 201.8 103 98.1
CARHR099140 Cardamine hirsuta HOM05D001652 ORTHO05D015251 1.6e-44 183.7 242 51.7
AT3G23190 Arabidopsis thaliana HOM05D001652 ORTHO05D015251 1.3e-38 164.1 242 47.1
Carub.0003s2342 Capsella rubella HOM05D001652 ORTHO05D015251 3.8e-38 162.5 244 46.7
AL3G37820 Arabidopsis lyrata HOM05D001652 ORTHO05D015251 1.5e-37 160.6 242 47.1
Thhalv10022215m.g Eutrema salsugineum HOM05D001652 ORTHO05D015251 1.9e-37 160.2 241 44.8
THA.LOC104808615 Tarenaya hassleriana HOM05D001652 ORTHO05D015251 1.0e-35 154.5 233 43.3
Aa31LG8G9690 Aethionema arabicum HOM05D001652 ORTHO05D015251 3.7e-33 146.0 177 48.6
BolC1t04035H Brassica oleracea HOM05D023307 ORTHO05D015251 2.8e-20 103.2 61 83.6
A07p09300 Brassica napus HOM05D009905 ORTHO05D012030 2.8e-12 76.6 222 27.9
BraA07t28729Z Brassica rapa HOM05D009905 ORTHO05D012030 2.8e-12 76.6 222 27.9
Sp3g20840 Schrenkiella parvula HOM05D009905 ORTHO05D012030 2.8e-12 76.6 222 30.2
BolC7t41933H Brassica oleracea HOM05D009905 ORTHO05D012030 3.6e-12 76.3 226 29.2
C07p14360 Brassica napus HOM05D009905 ORTHO05D012030 4.7e-12 75.9 226 28.8
CARHR099130 Cardamine hirsuta HOM05D009905 ORTHO05D012030 1.0e-11 74.7 226 27.9
THA.LOC104808614 Tarenaya hassleriana HOM05D001652 ORTHO05D012030 1.0e-11 74.7 224 25.0
AL3G37810 Arabidopsis lyrata HOM05D009905 ORTHO05D012030 4.0e-11 72.8 230 25.7
AT3G23180 Arabidopsis thaliana HOM05D009905 ORTHO05D012030 6.8e-11 72.0 222 26.6
BraA03t13460Z Brassica rapa HOM05D009905 ORTHO05D012030 6.8e-11 72.0 222 27.5
BcaB06g26452 Brassica carinata HOM05D009905 ORTHO05D012030 1.2e-10 71.2 227 28.6
A01p31890 Brassica napus HOM05D009905 ORTHO05D012030 1.2e-10 71.2 225 27.6
BraA01t03316Z Brassica rapa HOM05D009905 ORTHO05D012030 1.2e-10 71.2 225 27.6
BcaB04g20466 Brassica carinata HOM05D009905 ORTHO05D012030 1.5e-10 70.9 222 27.9
BcaB03g14630 Brassica carinata HOM05D009905 ORTHO05D012030 2.6e-10 70.1 221 26.2
C01p40780 Brassica napus HOM05D009905 ORTHO05D012030 2.6e-10 70.1 222 27.5
BcaC09g49259 Brassica carinata HOM05D009905 ORTHO05D012030 4.4e-10 69.3 222 27.5
BcaC01g03386 Brassica carinata HOM05D009905 ORTHO05D012030 7.5e-10 68.6 222 26.6
Carub.0003s2341 Capsella rubella HOM05D009905 ORTHO05D012030 6.4e-09 65.5 223 26.0
Aa31LG8G9680 Aethionema arabicum HOM05D009905 ORTHO05D012030 7.0e-08 62.0 226 24.3
BolC3t17571H Brassica oleracea HOM05D009905 ORTHO05D012030 7.0e-08 62.0 176 27.3
Rhsim02G0035500 Rhododendron simsii HOM05D001652 ORTHO05D001768 2.7e-07 60.1 107 34.6
Aqoxy2G03619 Aquilegia oxysepala HOM05D001652 ORTHO05D001768 3.5e-07 59.7 120 31.7
BcaC04g21910 Brassica carinata HOM05D001652 ORTHO05D001768 4.6e-07 59.3 121 33.1
C09p25900 Brassica napus HOM05D001652 ORTHO05D001768 4.6e-07 59.3 121 33.1
Ciclev10006114m.g Citrus clementina HOM05D001652 ORTHO05D001768 4.6e-07 59.3 106 34.9
Dinv44663 Davidia involucrata HOM05D001652 ORTHO05D001768 4.6e-07 59.3 106 32.1
CSS0046283 Camellia sinensis var. sinensis HOM05D001652 ORTHO05D001768 6.0e-07 58.9 111 34.2
Aqoxy5G00259 Aquilegia oxysepala HOM05D001652 ORTHO05D001768 7.8e-07 58.5 107 35.5
TWI53G0588 Tripterygium wilfordii HOM05D001652 ORTHO05D001768 7.8e-07 58.5 124 33.1
BolC9t55496H Brassica oleracea HOM05D001652 ORTHO05D001768 1.0e-06 58.2 121 33.1
Hma1.2p1_1716F.1_g299100 Hydrangea macrophylla HOM05D001652 ORTHO05D001768 1.0e-06 58.2 113 32.7
Hma1.2p1_1716F.1_g299106 Hydrangea macrophylla HOM05D001652 ORTHO05D001768 1.0e-06 58.2 113 32.7
AT1G04340 Arabidopsis thaliana HOM05D001652 ORTHO05D001768 1.3e-06 57.8 121 32.2
C03p53050 Brassica napus HOM05D009905 ORTHO05D012030 1.3e-06 57.8 176 26.7
RcHm_v2.0_Chr4g0391911 Rosa chinensis HOM05D001652 ORTHO05D001768 1.3e-06 57.8 143 26.6
Actinidia40076 Actinidia chinensis HOM05D001652 ORTHO05D001768 1.7e-06 57.4 106 33.0
CSS0020553 Camellia sinensis var. sinensis HOM05D001652 ORTHO05D001768 1.7e-06 57.4 114 32.5
TAR365G1118 Trochodendron aralioides HOM05D001652 ORTHO05D001768 1.7e-06 57.4 106 33.0
FAN17G1723 Fragaria x ananassa HOM05D001652 ORTHO05D001768 3.0e-06 56.6 142 26.8
TWI53G0175 Tripterygium wilfordii HOM05D001652 ORTHO05D001768 3.0e-06 56.6 124 30.6
BolC5t29031H Brassica oleracea HOM05D001652 ORTHO05D001768 3.9e-06 56.2 121 31.4
FvH4_4g03230 Fragaria vesca HOM05D001652 ORTHO05D001768 3.9e-06 56.2 142 26.8
Manes.15G038600 Manihot esculenta HOM05D001652 ORTHO05D001768 3.9e-06 56.2 141 27.7
BcaC05g24451 Brassica carinata HOM05D001652 ORTHO05D001768 5.0e-06 55.8 110 31.8
A09p20490 Brassica napus HOM05D001652 ORTHO05D001768 5.0e-06 55.8 121 31.4
C05p02520 Brassica napus HOM05D001652 ORTHO05D001768 5.0e-06 55.8 110 31.8
BraA09t37655Z Brassica rapa HOM05D001652 ORTHO05D001768 5.0e-06 55.8 121 31.4
CiPaw.01G187900 Carya illinoinensis HOM05D001652 ORTHO05D001768 5.0e-06 55.8 106 33.0
Duzib052G1234 Durio zibethinus HOM05D001652 ORTHO05D001768 5.0e-06 55.8 110 30.9
Thhalv10008972m.g Eutrema salsugineum HOM05D001652 ORTHO05D001768 5.0e-06 55.8 121 31.4
SGA_v2.0_scaffold88G27267 Striga asiatica HOM05D001652 ORTHO05D001768 5.0e-06 55.8 91 38.5
THA.LOC104808612 Tarenaya hassleriana HOM05D001652 ORTHO05D001768 5.0e-06 55.8 100 33.0
Aa31LG8G9660 Aethionema arabicum HOM05D001652 ORTHO05D001768 6.6e-06 55.5 93 36.6
BcaB07g31006 Brassica carinata HOM05D001652 ORTHO05D001768 6.6e-06 55.5 121 31.4
BraA10t42543Z Brassica rapa HOM05D001652 ORTHO05D001768 6.6e-06 55.5 121 31.4
Carub.0008s0513 Capsella rubella HOM05D001652 ORTHO05D001768 6.6e-06 55.5 121 31.4
Ciclev10006115m.g Citrus clementina HOM05D001652 ORTHO05D001768 6.6e-06 55.5 106 32.1
Manes.03G166800 Manihot esculenta HOM05D001652 ORTHO05D001768 6.6e-06 55.5 108 35.2
QL06p016732 Quercus lobata HOM05D001652 ORTHO05D001768 6.6e-06 55.5 119 30.3
BcaC05g24449 Brassica carinata HOM05D001652 ORTHO05D001768 8.6e-06 55.1 121 31.4
A08p36990 Brassica napus HOM05D001652 ORTHO05D001768 8.6e-06 55.1 110 30.9
Carub.0001s0352 Capsella rubella HOM05D001652 ORTHO05D001768 8.6e-06 55.1 121 30.6


User provided reference genes

Program Settings