Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p30680 Brassica napus HOM05D006758 ORTHO05D008326 1.6e-19 98.2 43 100.0
BraA01t03197Z Brassica rapa HOM05D006758 ORTHO05D008326 1.6e-19 98.2 43 100.0
BcaB04g20373 Brassica carinata HOM05D006758 ORTHO05D008326 8.1e-19 95.9 43 97.7
A01p30660 Brassica napus HOM05D006758 ORTHO05D008326 8.1e-19 95.9 43 97.7
Sp2g02770 Schrenkiella parvula HOM05D006758 ORTHO05D008326 8.1e-19 95.9 43 97.7
Aa31LG1G3210 Aethionema arabicum HOM05D006758 ORTHO05D008326 1.8e-18 94.7 43 95.3
AL2G14330 Arabidopsis lyrata HOM05D006758 ORTHO05D008326 1.8e-18 94.7 43 95.3
AT1G61780 Arabidopsis thaliana HOM05D006758 ORTHO05D008326 1.8e-18 94.7 43 95.3
BcaC04g22349 Brassica carinata HOM05D006758 ORTHO05D008326 1.8e-18 94.7 43 95.3
C09p20260 Brassica napus HOM05D006758 ORTHO05D008326 1.8e-18 94.7 43 95.3
BolC9t54931H Brassica oleracea HOM05D006758 ORTHO05D008326 1.8e-18 94.7 43 95.3
Carub.0002s0329 Capsella rubella HOM05D006758 ORTHO05D008326 1.8e-18 94.7 43 95.3
COL.COLO4_31733 Corchorus olitorius HOM05D006758 ORTHO05D008326 4.0e-18 93.6 43 93.0
Nitab4.5_0002347g0160 Nicotiana tabacum HOM05D006758 ORTHO05D008326 4.0e-18 93.6 43 93.0
Nitab4.5_0008530g0010 Nicotiana tabacum HOM05D006758 ORTHO05D008326 4.0e-18 93.6 43 93.0
Prupe.4G025700 Prunus persica HOM05D006758 ORTHO05D008326 4.0e-18 93.6 43 93.0
Thhalv10023778m.g Eutrema salsugineum HOM05D006758 ORTHO05D008326 5.2e-18 93.2 43 93.0
Peaxi162Scf00082g10217 Petunia axillaris HOM05D006758 ORTHO05D008326 6.8e-18 92.8 43 93.0
TWI38G0518 Tripterygium wilfordii HOM05D006758 ORTHO05D008326 6.8e-18 92.8 43 93.0
unitig_61.g26114 Utricularia gibba HOM05D006758 ORTHO05D008326 6.8e-18 92.8 43 93.0
BcaB07g31284 Brassica carinata HOM05D006758 ORTHO05D008326 8.9e-18 92.4 42 95.2
A09p16650 Brassica napus HOM05D006758 ORTHO05D008326 8.9e-18 92.4 42 95.2
BraA09t37304Z Brassica rapa HOM05D006758 ORTHO05D008326 8.9e-18 92.4 42 95.2
CARHR050560 Cardamine hirsuta HOM05D006758 ORTHO05D008326 8.9e-18 92.4 42 95.2
Gohir.A09G069700 Gossypium hirsutum HOM05D006758 ORTHO05D008326 1.2e-17 92.0 43 90.7
Gohir.D09G069600 Gossypium hirsutum HOM05D006758 ORTHO05D008326 1.2e-17 92.0 43 90.7
Gorai.006G083800 Gossypium raimondii HOM05D006758 ORTHO05D008326 1.2e-17 92.0 43 90.7
MD05G1341600 Malus domestica HOM05D006758 ORTHO05D008326 1.2e-17 92.0 43 90.7
MD10G1315000 Malus domestica HOM05D006758 ORTHO05D008326 1.2e-17 92.0 43 90.7
Potri.004G021200 Populus trichocarpa HOM05D006758 ORTHO05D008326 1.2e-17 92.0 43 90.7
Sed0024295 Sechium edule HOM05D006758 ORTHO05D008326 1.2e-17 92.0 43 90.7
Actinidia11840 Actinidia chinensis HOM05D006758 ORTHO05D008326 1.5e-17 91.7 43 90.7
CAN.G569.41 Capsicum annuum HOM05D006758 ORTHO05D008326 2.0e-17 91.3 42 92.9
Ca_10997_v3 Cicer arietinum L. HOM05D006758 ORTHO05D008326 2.0e-17 91.3 43 90.7
MELO3C007373.2 Cucumis melo HOM05D006758 ORTHO05D008326 2.0e-17 91.3 43 90.7
CsaV3_6G049220 Cucumis sativus L. HOM05D006758 ORTHO05D008326 2.0e-17 91.3 43 90.7
Oeu037351.1 Olea europaea HOM05D006758 ORTHO05D008326 2.0e-17 91.3 43 90.7
Rhsim02G0111700 Rhododendron simsii HOM05D006758 ORTHO05D008326 2.0e-17 91.3 43 90.7
Solyc02g080140.4 Solanum lycopersicum HOM05D006758 ORTHO05D008326 2.0e-17 91.3 42 92.9
Sopen02g024850 Solanum pennellii HOM05D006758 ORTHO05D008326 2.0e-17 91.3 42 92.9
SGA_v2.0_scaffold7G03879 Striga asiatica HOM05D006758 ORTHO05D008326 2.0e-17 91.3 43 90.7
TPR.G5478 Trifolium pratense HOM05D006758 ORTHO05D008326 2.0e-17 91.3 43 90.7
EL10Ac8g19995 Beta vulgaris HOM05D006758 ORTHO05D008326 2.6e-17 90.9 43 90.7
THA.LOC104809516 Tarenaya hassleriana HOM05D006758 ORTHO05D008326 2.6e-17 90.9 43 90.7
CANSAT56G2354 Cannabis sativa HOM05D006758 ORTHO05D008326 3.4e-17 90.5 43 88.4
Lj5g0020351 Lotus japonicus HOM05D006758 ORTHO05D008326 3.4e-17 90.5 43 88.4
Sabra04G0011700 Salix brachista HOM05D006758 ORTHO05D008326 3.4e-17 90.5 43 88.4
Thecc.06G214600 Theobroma cacao HOM05D006758 ORTHO05D008326 3.4e-17 90.5 43 90.7
Duzib235G1228 Durio zibethinus HOM05D006758 ORTHO05D008326 4.4e-17 90.1 43 88.4
FvH4_3g02640 Fragaria vesca HOM05D006758 ORTHO05D008326 4.4e-17 90.1 43 88.4
Hma1.2p1_2726F.1_g327620 Hydrangea macrophylla HOM05D006758 ORTHO05D008326 4.4e-17 90.1 43 86.0
Psat0s2691g0120 Pisum sativum HOM05D006758 ORTHO05D008326 4.4e-17 90.1 43 88.4
RcHm_v2.0_Chr5g0003931 Rosa chinensis HOM05D006758 ORTHO05D008326 4.4e-17 90.1 43 88.4
CiPaw.09G087600 Carya illinoinensis HOM05D006758 ORTHO05D008326 5.8e-17 89.7 43 88.4
Migut.M01286 Erythranthe guttata HOM05D006758 ORTHO05D008326 5.8e-17 89.7 43 88.4
Gohir.A06G207900 Gossypium hirsutum HOM05D006758 ORTHO05D008326 5.8e-17 89.7 43 88.4
Gorai.010G252900 Gossypium raimondii HOM05D006758 ORTHO05D008326 5.8e-17 89.7 43 88.4
Os08g0190800 Oryza sativa ssp. japonica HOM05D006758 ORTHO05D008326 5.8e-17 89.7 43 88.4
Zm00001eb413280 Zea mays HOM05D006758 ORTHO05D008326 5.8e-17 89.7 43 88.4
DCAR_004197 Daucus carota HOM05D006758 ORTHO05D008326 7.5e-17 89.4 43 86.0
Lalb_Chr06g0164881 Lupinus albus HOM05D006758 ORTHO05D008326 7.5e-17 89.4 43 88.4
PGR004G2441 Punica granatum HOM05D006758 ORTHO05D008326 7.5e-17 89.4 43 88.4
arahy.Tifrunner.gnm1.ann1.GJ8XD1 Arachis hypogaea HOM05D006758 ORTHO05D008326 9.8e-17 89.0 43 88.4
arahy.Tifrunner.gnm1.ann1.ND4ZK6 Arachis hypogaea HOM05D006758 ORTHO05D008326 9.8e-17 89.0 43 88.4
ClCG01G022160 Citrullus lanatus HOM05D006758 ORTHO05D008326 9.8e-17 89.0 43 88.4
Ciclev10017296m.g Citrus clementina HOM05D006758 ORTHO05D008326 9.8e-17 89.0 43 88.4
Cc02_g11670 Coffea canephora HOM05D006758 ORTHO05D008326 9.8e-17 89.0 43 88.4
ECA234G0861 Erigeron canadensis HOM05D006758 ORTHO05D008326 9.8e-17 89.0 43 88.4
HanXRQChr16g0515881 Helianthus annuus HOM05D006758 ORTHO05D008326 9.8e-17 89.0 43 88.4
Phvul.007G052700 Phaseolus vulgaris HOM05D006758 ORTHO05D008326 9.8e-17 89.0 43 88.4
TAR624G0544 Trochodendron aralioides HOM05D006758 ORTHO05D008326 9.8e-17 89.0 43 88.4
AUR62022003 Chenopodium quinoa HOM05D006758 ORTHO05D008326 1.3e-16 88.6 43 88.4
Duzib192G0534 Durio zibethinus HOM05D006758 ORTHO05D008326 1.3e-16 88.6 43 86.0
Hma1.2p1_2714F.1_g327410 Hydrangea macrophylla HOM05D006758 ORTHO05D008326 1.3e-16 88.6 43 86.0
TAR626G1807 Trochodendron aralioides HOM05D006758 ORTHO05D008326 1.3e-16 88.6 41 90.2
GSVIVG01012634001 Vitis vinifera HOM05D006758 ORTHO05D008326 1.3e-16 88.6 43 86.0
Dinv20021 Davidia involucrata HOM05D006758 ORTHO05D008326 1.7e-16 88.2 43 86.0
Eucgr.D01293 Eucalyptus grandis HOM05D006758 ORTHO05D008326 1.7e-16 88.2 43 86.0
PSO210G7269 Papaver somniferum HOM05D006758 ORTHO05D008326 1.7e-16 88.2 43 86.0
PSO832G0089 Papaver somniferum HOM05D006758 ORTHO05D008326 1.7e-16 88.2 43 86.0
Lsat_1_v5_gn_4_59120 Lactuca sativa HOM05D006758 ORTHO05D008326 2.2e-16 87.8 42 85.7
Manes.17G035700 Manihot esculenta HOM05D006758 ORTHO05D008326 2.2e-16 87.8 43 86.0
DCAR_008127 Daucus carota HOM05D006758 ORTHO05D008326 2.9e-16 87.4 43 83.7
Nn1g03624 Nelumbo nucifera HOM05D006758 ORTHO05D008326 2.9e-16 87.4 43 86.0
Oeu051222.1 Olea europaea HOM05D006758 ORTHO05D008326 2.9e-16 87.4 43 86.0
Dinv17829 Davidia involucrata HOM05D006758 ORTHO05D008326 6.4e-16 86.3 42 88.1
Glyma.10G251800 Glycine max HOM05D006758 ORTHO05D008326 6.4e-16 86.3 42 88.1
Glyma.20G141700 Glycine max HOM05D006758 ORTHO05D008326 6.4e-16 86.3 42 88.1
SHI02162 Sapria himalayana HOM05D006758 ORTHO05D008326 6.4e-16 86.3 43 83.7
CDE05G3555 Ceratophyllum demersum HOM05D006758 ORTHO05D008326 1.1e-15 85.5 43 83.7
Pp3c2_14210 Physcomitrium patens HOM05D006758 ORTHO05D008326 2.4e-15 84.3 43 81.4
ATR0661G232 Amborella trichopoda HOM05D006758 ORTHO05D008326 4.1e-15 83.6 43 76.7
Sabra11G0016800 Salix brachista HOM05D006758 ORTHO05D008326 2.1e-14 81.3 43 81.4
SMO351G0293 Selaginella moellendorffii HOM05D006758 ORTHO05D008326 1.3e-13 78.6 43 72.1
CBR_g45280 Chara braunii HOM05D006758 ORTHO05D008326 3.0e-13 77.4 42 78.6
Mapoly0102s0010 Marchantia polymorpha HOM05D006758 ORTHO05D008326 3.0e-13 77.4 43 74.4
AagrBONN_evm.TU.Sc2ySwM_344.4905 Anthoceros agrestis HOM05D006758 ORTHO05D008326 5.1e-13 76.6 42 76.2
Cre16.g670200 Chlamydomonas reinhardtii HOM05D006758 ORTHO05D008326 5.2e-10 66.6 38 68.4
Sc17g0007080 Simmondsia chinensis HOM05D006758 ORTHO05D008326 4.9e-08 60.1 27 85.2
CSS0030244 Camellia sinensis var. sinensis HOM05D006758 ORTHO05D008326 1.9e-07 58.2 26 84.6
MBI16_g27830_MAGBIO Magnolia biondii HOM05D004176 ORTHO05D008326 1.9e-07 58.2 42 64.3
MBI15_g03894_MAGBIO Magnolia biondii HOM05D006758 ORTHO05D008326 2.7e-06 54.3 42 59.5
MCO09G771 Micromonas commoda HOM05D006758 ORTHO05D008326 2.7e-06 54.3 36 55.6
Ah.09g235270 Amaranthus hybridus HOM05D006758 ORTHO05D008326 7.8e-06 52.8 27 74.1


User provided reference genes

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