Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p28800 Brassica napus HOM05D024074 ORTHO05D024621 1.2e-26 122.5 65 100.0
C05p30520 Brassica napus HOM05D024074 ORTHO05D024621 2.3e-25 118.2 65 96.9
BolC5t31787H Brassica oleracea HOM05D024074 ORTHO05D024621 1.6e-23 112.1 65 92.3
C06p39990 Brassica napus HOM05D024074 ORTHO05D024621 3.7e-23 110.9 65 92.3
AT4G02230 Arabidopsis thaliana HOM05D001493 ORTHO05D001681 1.6e-10 68.9 41 87.8
BcaC04g24049 Brassica carinata HOM05D001493 ORTHO05D001681 3.5e-10 67.8 42 85.7
C09p01770 Brassica napus HOM05D001493 ORTHO05D001681 3.5e-10 67.8 42 85.7
Thhalv10028960m.g Eutrema salsugineum HOM05D001493 ORTHO05D001681 7.9e-10 66.6 41 85.4
BcaB01g02063 Brassica carinata HOM05D001493 ORTHO05D001681 1.0e-09 66.2 42 85.7
Sp6g02130 Schrenkiella parvula HOM05D001493 ORTHO05D001681 1.0e-09 66.2 41 82.9
Carub.0006s3493 Capsella rubella HOM05D001493 ORTHO05D001681 1.3e-09 65.9 40 85.0
AL6G50900 Arabidopsis lyrata HOM05D001493 ORTHO05D001681 2.3e-09 65.1 41 85.4
BolC9t53112H Brassica oleracea HOM05D001493 ORTHO05D001681 3.0e-09 64.7 42 83.3
CARHR250450 Cardamine hirsuta HOM05D001493 ORTHO05D001681 5.1e-09 63.9 41 80.5
Aa31LG5G1900 Aethionema arabicum HOM05D001493 ORTHO05D001681 1.5e-08 62.4 41 78.0
BcaC01g06768 Brassica carinata HOM05D001493 ORTHO05D001681 2.5e-08 61.6 37 83.8
A03p31150 Brassica napus HOM05D001493 ORTHO05D001681 2.5e-08 61.6 37 83.8
BolC3t16083H Brassica oleracea HOM05D001493 ORTHO05D001681 2.5e-08 61.6 37 83.8
BcaB01g02438 Brassica carinata HOM05D001493 ORTHO05D001681 5.7e-08 60.5 37 81.1
A09p01700 Brassica napus HOM05D001493 ORTHO05D001681 5.7e-08 60.5 43 81.4
BraA09t35825Z Brassica rapa HOM05D001493 ORTHO05D001681 5.7e-08 60.5 43 81.4
A08p37580 Brassica napus HOM05D001493 ORTHO05D001681 2.2e-07 58.5 41 78.0
BraA10t42421Z Brassica rapa HOM05D001493 ORTHO05D001681 8.2e-07 56.6 42 73.8
Carub.0001s0187 Capsella rubella HOM05D001493 ORTHO05D001681 1.1e-06 56.2 47 72.3
Thhalv10008661m.g Eutrema salsugineum HOM05D001493 ORTHO05D001681 1.1e-06 56.2 42 73.8
Gohir.A11G113000 Gossypium hirsutum HOM05D001493 ORTHO05D001681 1.1e-06 56.2 48 68.8
Gohir.D11G118000 Gossypium hirsutum HOM05D001493 ORTHO05D001681 1.1e-06 56.2 48 68.8
Gorai.007G126400 Gossypium raimondii HOM05D001493 ORTHO05D001681 1.1e-06 56.2 48 68.8
Aqoxy293s001 Aquilegia oxysepala HOM05D001493 ORTHO05D013936 3.1e-06 54.7 39 79.5
BcaC07g42406 Brassica carinata HOM05D001493 ORTHO05D001681 3.1e-06 54.7 41 70.7
BolC8t52830H Brassica oleracea HOM05D001493 ORTHO05D001681 3.1e-06 54.7 41 70.7
Duzib133G0698 Durio zibethinus HOM05D001493 ORTHO05D001681 3.1e-06 54.7 44 68.2
THA.LOC104802183 Tarenaya hassleriana HOM05D001493 ORTHO05D001681 3.1e-06 54.7 40 75.0
BcaB03g13503 Brassica carinata HOM05D001493 ORTHO05D001681 4.1e-06 54.3 40 77.5
C05p01420 Brassica napus HOM05D001493 ORTHO05D001681 5.3e-06 53.9 38 76.3
CARHR002060 Cardamine hirsuta HOM05D001493 ORTHO05D001681 6.9e-06 53.5 42 71.4
TPR.G9602 Trifolium pratense HOM05D001493 ORTHO05D001681 6.9e-06 53.5 36 77.8
AT1G02780 Arabidopsis thaliana HOM05D001493 ORTHO05D001681 9.0e-06 53.1 37 78.4
BcaC07g36995 Brassica carinata HOM05D001493 ORTHO05D001681 9.0e-06 53.1 37 78.4
A09p68540 Brassica napus HOM05D001493 ORTHO05D001681 9.0e-06 53.1 37 78.4
C08p00210 Brassica napus HOM05D001493 ORTHO05D001681 9.0e-06 53.1 37 78.4
C08p53150 Brassica napus HOM05D001493 ORTHO05D001681 9.0e-06 53.1 37 78.4
BolC8t46823H Brassica oleracea HOM05D001493 ORTHO05D001681 9.0e-06 53.1 37 78.4
BraA09t42197Z Brassica rapa HOM05D001493 ORTHO05D001681 9.0e-06 53.1 37 78.4


User provided reference genes

Program Settings