Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 1.3e-191 672.9 346 100.0
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 1.9e-182 642.5 332 98.8
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 6.6e-172 607.4 333 93.1
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 1.5e-168 596.3 334 92.2
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 1.2e-160 570.1 326 87.1
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 1.1e-155 553.5 325 84.3
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 3.1e-153 545.4 329 87.8
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 3.1e-153 545.4 327 83.8
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 7.1e-150 534.3 323 82.4
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 1.2e-149 533.5 323 82.7
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 3.0e-148 528.9 323 81.4
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 9.7e-131 470.7 426 61.5
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 2.3e-124 449.5 336 68.8
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 1.1e-113 414.1 341 63.3
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 1.1e-113 414.1 344 61.9
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 1.4e-113 413.7 342 61.4
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 1.4e-113 413.7 341 61.6
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 2.4e-113 412.9 344 61.9
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 7.7e-112 407.9 343 61.5
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 1.7e-111 406.8 339 59.6
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 1.0e-108 397.5 343 58.3
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 1.2e-107 394.0 340 59.4
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 1.5e-107 393.7 331 59.5
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 8.2e-106 387.9 337 59.9
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 2.4e-105 386.3 322 61.5
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 2.4e-105 386.3 325 60.6
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 7.0e-105 384.8 305 65.6
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 1.2e-104 384.0 340 57.1
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 5.9e-104 381.7 338 56.5
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 5.9e-104 381.7 325 60.3
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 7.7e-104 381.3 345 55.7
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 5.0e-103 378.6 328 57.0
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.1e-102 377.5 334 56.3
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 7.2e-102 374.8 338 57.4
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 7.2e-102 374.8 341 57.5
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 1.6e-101 373.6 339 54.6
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 2.1e-101 373.2 340 56.8
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 2.7e-101 372.9 339 58.4
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 4.7e-101 372.1 344 55.2
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 1.0e-100 370.9 342 58.5
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 1.4e-100 370.5 340 57.1
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 5.2e-100 368.6 333 56.2
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 2.6e-99 366.3 278 66.9
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 1.3e-98 364.0 348 56.0
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 2.2e-98 363.2 340 54.7
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 5.4e-97 358.6 338 53.3
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 7.0e-97 358.2 347 56.8
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 2.0e-96 356.7 277 65.7
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 1.0e-95 354.4 341 52.5
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 1.3e-95 354.0 334 55.4
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 1.7e-95 353.6 338 52.7
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 2.9e-95 352.8 336 53.9
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 5.0e-95 352.1 342 54.1
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 1.5e-94 350.5 338 52.4
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 7.2e-94 348.2 335 54.0
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 1.6e-93 347.1 335 53.7
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 2.8e-93 346.3 336 53.3
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 6.1e-93 345.1 318 57.2
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 4.0e-92 342.4 324 53.4
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 6.8e-92 341.7 346 54.0
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 4.4e-91 339.0 314 58.0
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 4.4e-91 339.0 335 52.5
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 5.7e-91 338.6 339 53.1
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 2.8e-90 336.3 336 53.9
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 8.3e-90 334.7 331 53.8
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 1.4e-89 334.0 312 54.8
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 5.4e-89 332.0 337 51.3
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 9.2e-89 331.3 333 55.6
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 1.6e-88 330.5 339 51.9
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 2.0e-88 330.1 327 53.8
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 3.5e-88 329.3 333 52.0
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 3.5e-88 329.3 355 50.4
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 4.5e-88 328.9 349 50.1
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 1.0e-87 327.8 378 48.7
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 1.1e-86 324.3 350 48.9
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 2.5e-86 323.2 342 53.2
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 8.9e-84 314.7 319 53.9
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 2.6e-83 313.2 347 52.7
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 1.3e-82 310.8 272 56.2
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 1.3e-82 310.8 332 50.0
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 2.2e-82 310.1 315 52.4
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 3.7e-82 309.3 344 50.3
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 7.0e-81 305.1 280 55.7
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 2.7e-80 303.1 306 52.9
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 2.3e-79 300.1 301 51.8
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 3.4e-75 286.2 336 45.8
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 5.8e-75 285.4 322 48.4
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 2.1e-72 276.9 339 45.7
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 1.1e-62 244.6 212 57.5
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 1.7e-58 230.7 210 55.7
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 2.2e-50 203.8 205 49.8
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 1.9e-49 200.7 286 39.9
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 1.9e-46 190.7 173 57.8
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 6.2e-45 185.7 289 40.5
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 8.1e-45 185.3 128 76.6
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 7.6e-43 178.7 190 56.8
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 9.9e-43 178.3 169 52.7
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 1.9e-38 164.1 137 57.7
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 3.1e-36 156.8 110 75.5
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 1.8e-31 141.0 297 35.7
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 4.8e-29 132.9 167 49.1
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 4.8e-29 132.9 261 31.8
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 1.8e-28 131.0 339 30.4
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 4.0e-28 129.8 198 40.4
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 9.3e-25 118.6 158 38.6
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 3.3e-22 110.2 88 61.4
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 7.4e-22 109.0 112 50.0
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 7.7e-19 99.0 110 48.2
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 4.6e-16 89.7 79 50.6
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 1.1e-12 78.6 138 37.7
Glyma.07G264001 Glycine max HOM05D006958 ORTHO05D008814 2.9e-10 70.5 75 53.3
Psat0s3396g0160 Pisum sativum HOM05D006958 ORTHO05D008814 2.0e-06 57.8 37 67.6
HPP92_009560 Vanilla planifolia HOM05D001084 ORTHO05D001275 7.4e-06 55.8 74 47.3


User provided reference genes

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