Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p27780 Brassica napus HOM05D007461 ORTHO05D010345 3.9e-111 404.8 205 100.0
BraA01t02914Z Brassica rapa HOM05D007461 ORTHO05D010345 3.9e-111 404.8 205 100.0
A01p27710 Brassica napus HOM05D007461 ORTHO05D010345 1.6e-109 399.4 204 99.0
BraA01t02908Z Brassica rapa HOM05D007461 ORTHO05D010345 1.6e-109 399.4 204 99.0
BcaC09g49538 Brassica carinata HOM05D007461 ORTHO05D010345 5.1e-103 377.9 194 97.4
A03p47460 Brassica napus HOM05D007461 ORTHO05D010345 1.4e-100 369.8 204 90.7
BcaC06g33251 Brassica carinata HOM05D007461 ORTHO05D010345 2.3e-100 369.0 204 90.2
C07p45440 Brassica napus HOM05D007461 ORTHO05D010345 2.3e-100 369.0 204 90.2
BcaC06g33133 Brassica carinata HOM05D007461 ORTHO05D010345 4.0e-100 368.2 204 90.2
BraA03t13859Z Brassica rapa HOM05D007461 ORTHO05D010345 2.9e-98 362.1 213 86.9
BolC7t45065H Brassica oleracea HOM05D007461 ORTHO05D010345 4.9e-98 361.3 213 86.4
Sp2g24920 Schrenkiella parvula HOM05D007461 ORTHO05D010345 2.0e-91 339.3 205 84.4
AT5G61720 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 1.8e-79 299.7 205 71.7
A03p47400 Brassica napus HOM05D007461 ORTHO05D010345 1.8e-79 299.7 179 86.0
AL8G38440 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 1.2e-75 287.0 205 69.8
AL8G38480 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 1.2e-75 287.0 205 69.8
Carub.0008s2241 Capsella rubella HOM05D007461 ORTHO05D010345 7.6e-75 284.3 204 71.6
CARHR032520 Cardamine hirsuta HOM05D007461 ORTHO05D010345 2.3e-71 272.7 204 65.7
BcaNung06540 Brassica carinata HOM05D007461 ORTHO05D010345 3.7e-69 265.4 194 74.2
C01p35430 Brassica napus HOM05D007461 ORTHO05D010345 3.9e-55 218.8 181 59.7
BolC1t03500H Brassica oleracea HOM05D007461 ORTHO05D010345 3.9e-55 218.8 181 59.7
Thhalv10004320m.g Eutrema salsugineum HOM05D007461 ORTHO05D010345 2.2e-50 203.0 207 55.1
Sp2g27570 Schrenkiella parvula HOM05D007461 ORTHO05D010345 8.8e-47 191.0 180 55.6
Thhalv10003856m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 3.8e-42 175.6 193 49.2
Aa31LG2G4390 Aethionema arabicum HOM05D007461 ORTHO05D010345 5.0e-42 175.3 165 52.1
Carub.0005s0737 Capsella rubella HOM05D007461 ORTHO05D011250 6.5e-42 174.9 195 49.2
AL5G18560 Arabidopsis lyrata HOM05D007461 ORTHO05D011250 1.9e-41 173.3 195 48.2
Sp2g17440 Schrenkiella parvula HOM05D007461 ORTHO05D011250 1.9e-41 173.3 195 49.2
AT3G28830 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 1.2e-40 170.6 195 47.2
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 1.4e-39 167.2 198 44.9
BolC7t44288H Brassica oleracea HOM05D007461 ORTHO05D010345 1.4e-39 167.2 198 44.9
BcaC05g26639 Brassica carinata HOM05D007461 ORTHO05D010345 1.8e-39 166.8 176 52.3
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 2.3e-39 166.4 198 44.9
BraA06t26952Z Brassica rapa HOM05D007461 ORTHO05D010345 2.3e-39 166.4 198 44.9
AT3G28790 Arabidopsis thaliana HOM05D007461 ORTHO05D011250 5.2e-39 165.2 195 48.2
CARHR151780 Cardamine hirsuta HOM05D007461 ORTHO05D010345 1.5e-38 163.7 195 44.1
Sp2g17460 Schrenkiella parvula HOM05D007461 ORTHO05D010345 5.7e-38 161.8 193 48.2
AL5G18590 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 1.3e-37 160.6 195 48.7
CARHR151810 Cardamine hirsuta HOM05D007461 ORTHO05D010345 1.7e-37 160.2 195 45.6
AT3G28780 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 4.8e-37 158.7 184 45.7
A02p43330 Brassica napus HOM05D007461 ORTHO05D010345 4.8e-37 158.7 206 45.6
BraA02t09259Z Brassica rapa HOM05D007461 ORTHO05D010345 4.8e-37 158.7 206 45.6
Carub.0005s0733 Capsella rubella HOM05D007461 ORTHO05D010345 4.8e-37 158.7 177 46.9
AL5G18520 Arabidopsis lyrata HOM05D007461 ORTHO05D010345 6.3e-37 158.3 185 47.0
Sp2g17450 Schrenkiella parvula HOM05D007461 ORTHO05D011250 1.8e-36 156.8 196 44.9
Aa31LG2G4420 Aethionema arabicum HOM05D007461 ORTHO05D010345 4.1e-36 155.6 181 45.9
BcaC03g18265 Brassica carinata HOM05D007461 ORTHO05D010345 5.3e-36 155.2 206 45.6
C02p63400 Brassica napus HOM05D007461 ORTHO05D010345 5.3e-36 155.2 206 45.6
BolC2t12408H Brassica oleracea HOM05D007461 ORTHO05D010345 5.3e-36 155.2 206 45.6
AT3G28840 Arabidopsis thaliana HOM05D007461 ORTHO05D010345 1.6e-35 153.7 187 47.6
Thhalv10003975m.g Eutrema salsugineum HOM05D007461 ORTHO05D011250 2.0e-35 153.3 196 43.9
BcaC06g30894 Brassica carinata HOM05D007461 ORTHO05D011250 4.5e-35 152.1 191 44.0
Thhalv10004661m.g Eutrema salsugineum HOM05D007461 ORTHO05D010345 3.8e-34 149.1 187 46.5
Carub.0005s0734 Capsella rubella HOM05D007461 ORTHO05D011250 1.1e-33 147.5 195 43.6
BcaB07g29745 Brassica carinata HOM05D007461 ORTHO05D010345 2.5e-33 146.4 205 43.9
BcaC06g30895 Brassica carinata HOM05D007461 ORTHO05D010345 1.6e-32 143.7 187 41.7
Aa31LG6G10300 Aethionema arabicum HOM05D007461 ORTHO05D011250 1.0e-31 141.0 188 44.1
C02p55070 Brassica napus HOM05D007461 ORTHO05D011250 8.8e-31 137.9 199 42.7
A02p36090 Brassica napus HOM05D007461 ORTHO05D011250 1.2e-30 137.5 198 41.4
CARHR151820 Cardamine hirsuta HOM05D007461 ORTHO05D011250 4.4e-30 135.6 195 41.0
BcaC03g17532 Brassica carinata HOM05D007461 ORTHO05D011250 9.7e-30 134.4 190 40.0
C02p55020 Brassica napus HOM05D007461 ORTHO05D011250 9.7e-30 134.4 190 40.0
BolC2t11559H Brassica oleracea HOM05D007461 ORTHO05D011250 9.7e-30 134.4 190 41.1
BraA02t08608Z Brassica rapa HOM05D007461 ORTHO05D011250 8.2e-29 131.3 190 40.0
THA.LOC104823939 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 1.1e-28 131.0 189 41.8
Carub.0005s0738 Capsella rubella HOM05D007461 ORTHO05D010345 1.8e-28 130.2 187 41.7
C02p54910 Brassica napus HOM05D007461 ORTHO05D010345 2.4e-28 129.8 190 41.6
C09p03980 Brassica napus HOM05D007461 ORTHO05D011250 5.3e-28 128.6 190 38.9
BolC2t11551H Brassica oleracea HOM05D007461 ORTHO05D010345 5.3e-28 128.6 179 41.3
BolC9t53330H Brassica oleracea HOM05D007461 ORTHO05D011250 5.3e-28 128.6 190 38.9
A06p40340 Brassica napus HOM05D007461 ORTHO05D011250 7.0e-28 128.3 192 38.5
BraA06t26951Z Brassica rapa HOM05D007461 ORTHO05D011250 7.0e-28 128.3 192 38.5
BcaC03g17529 Brassica carinata HOM05D007461 ORTHO05D010345 1.2e-27 127.5 190 41.6
BolC2t11556H Brassica oleracea HOM05D007461 ORTHO05D010345 1.6e-27 127.1 189 40.7
BraA09t36016Z Brassica rapa HOM05D007461 ORTHO05D011250 1.6e-27 127.1 190 38.4
BcaC04g23863 Brassica carinata HOM05D007461 ORTHO05D011250 2.0e-27 126.7 190 38.4
A02p36070 Brassica napus HOM05D007461 ORTHO05D010345 2.0e-27 126.7 190 41.6
Aa31LG2G4410 Aethionema arabicum HOM05D007461 ORTHO05D011250 2.7e-27 126.3 188 39.9
THA.LOC104808341 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 3.5e-27 125.9 189 37.6
BraA06t26950Z Brassica rapa HOM05D007461 ORTHO05D010345 7.7e-27 124.8 195 40.5
BcaB07g30116 Brassica carinata HOM05D007461 ORTHO05D010345 1.3e-26 124.0 190 40.0
BcaB07g30117 Brassica carinata HOM05D007461 ORTHO05D010345 1.3e-26 124.0 190 40.0
BcaC06g33642 Brassica carinata HOM05D007461 ORTHO05D011250 1.3e-26 124.0 192 37.5
C07p37710 Brassica napus HOM05D007461 ORTHO05D011250 1.3e-26 124.0 192 37.5
BolC7t44289H Brassica oleracea HOM05D007461 ORTHO05D011250 1.3e-26 124.0 192 37.5
BcaB07g30115 Brassica carinata HOM05D007461 ORTHO05D011250 2.2e-26 123.2 179 39.1
A09p03780 Brassica napus HOM05D007461 ORTHO05D011250 2.9e-26 122.9 190 38.4
A06p40330 Brassica napus HOM05D007461 ORTHO05D010345 3.8e-26 122.5 195 40.0
THA.LOC104805456 Tarenaya hassleriana HOM05D007461 ORTHO05D010345 6.5e-26 121.7 189 38.1
A02p36080 Brassica napus HOM05D007461 ORTHO05D011250 1.5e-25 120.6 190 37.9
C07p37720 Brassica napus HOM05D007461 ORTHO05D010345 3.2e-25 119.4 187 39.6
BolC7t44290H Brassica oleracea HOM05D007461 ORTHO05D010345 3.2e-25 119.4 187 39.6
Aa31LG2G4430 Aethionema arabicum HOM05D007461 ORTHO05D010345 1.4e-23 114.0 201 35.8
BcaB04g19484 Brassica carinata HOM05D007461 ORTHO05D011250 1.5e-22 110.5 190 36.8
BcaC06g33641 Brassica carinata HOM05D007461 ORTHO05D010345 2.0e-22 110.2 116 46.6
CARHR151830 Cardamine hirsuta HOM05D007461 ORTHO05D010345 3.4e-22 109.4 193 38.9
Sp2g17430 Schrenkiella parvula HOM05D007461 ORTHO05D010345 7.7e-19 98.2 117 44.4
A03p47330 Brassica napus HOM05D007461 ORTHO05D010345 8.6e-18 94.7 77 59.7
BcaB07g30114 Brassica carinata HOM05D007461 ORTHO05D011250 6.8e-15 85.1 118 39.8
BcaC03g17533 Brassica carinata HOM05D007461 ORTHO05D011250 2.6e-14 83.2 118 39.8
BcaC06g33643 Brassica carinata HOM05D007461 ORTHO05D010345 2.8e-13 79.7 138 36.2
BcaC06g30893 Brassica carinata HOM05D007461 ORTHO05D010345 1.2e-11 74.3 146 34.2
Aa31LG2G4440 Aethionema arabicum HOM05D011893 ORTHO05D013967 1.0e-10 71.2 153 32.0
Aa31LG6G10290 Aethionema arabicum HOM05D007461 ORTHO05D011250 1.3e-10 70.9 170 30.6
THA.LOC104805452 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 2.9e-10 69.7 190 25.3
THA.LOC104800047 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 3.8e-10 69.3 190 24.7
THA.LOC104805455 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 3.8e-10 69.3 190 24.7
AL7G50270 Arabidopsis lyrata HOM05D008352 ORTHO05D014403 1.9e-09 67.0 160 30.0
THA.LOC104823938 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 5.6e-09 65.5 182 29.7
THA.LOC104823934 Tarenaya hassleriana HOM05D008352 ORTHO05D011361 1.6e-08 63.9 196 25.0
THA.LOC104823936 Tarenaya hassleriana HOM05D008352 ORTHO05D014403 4.7e-08 62.4 184 29.9
AT5G39870 Arabidopsis thaliana HOM05D008352 ORTHO05D014403 8.0e-08 61.6 186 26.9
BcaC06g33640 Brassica carinata HOM05D007461 ORTHO05D093415 4.0e-07 59.3 69 44.9
CARHR262310 Cardamine hirsuta HOM05D008352 ORTHO05D014403 6.8e-07 58.5 160 28.1
Carub.0005s0732 Capsella rubella HOM05D011893 ORTHO05D013967 2.0e-06 57.0 151 27.8
Thhalv10004155m.g Eutrema salsugineum HOM05D008352 ORTHO05D011361 5.7e-06 55.5 194 27.3


User provided reference genes

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